Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00951 ATGCTCAAGAAGTGTTCCTATGAAGTGACTACATGTTGTTTGGCGAGGCATGCTCTACACTTGCTTCGCGAAAGGAAAGACGGGTATGATATAGTGATCAGCGATGTGAACATGCCTGACATGGATGGATTCAAACTTCTAGAGCATGTTGGACTTGAGATGGATCTTCCTGTGATTATGATGTCTGTTGATGGAGAAACAAGCAGGGTGATGAAAGGTGTTCAACACGGAGCATGCGATTATCTGCTTAAGCCTATAAGGATGAAGGAACTGCGAAACATATGGCAGCATGTCTTTAGGAAAAGGATACACGAGGCGAGAGAATTCGAGAGTTTTGAAGGTTTCGAGAGCATTCACCTGATGAGAAACGGATTGGAGCAATGCGATGATGGGAACCTGTTTGCCCTTGAAGACATGACCTCAACTAAGAAAAGAAAAGATGCAGATAACAAACACGATGACAGAGAATTGATAGATCCATCATCCACAAAGAAAGCTAGAGTAGTTTGGTCTGTGGATCTTCACCAGAAGTTTGTTAAAGCAGTGAATCAAATTGGATTTGATAAAGTTGGTCCAAAGAAAATACTAGATCTCATGAATGTTCCTTGGCTGACTAGAGAAAATGTTGCAAGCCACTTGCAGAAGTATCGGCTTTACCTAAGCCGGCTTCAAAAAGAGAACGATCTGAAGTCGTCTTCCTCAATCGGAATGAACCCGGATTTAGCCGCAACAGATCTAGGGAGTTTTGTTGGAGTTCAGAACTCAGTGAGCAAGAAACAAAATGATGTTTCAATTGACAGCTGCAGTTATTCAGAAGGAGCACTGCAACTTCAGAACATGGAAACCAAAACTCATGAAGGTAGCAGTGATCCAAACGGAACTATTTCTCCGCCTGCCACTACAGAAAAAGGAAGAACTATGATCAGAAACTTTGTTTCCGAGAAAAAGATGAGAAAGAACCAACCTTTTGACTCTCTTGAGCCGGAAGGAAACCACACAGCAGTAATTGATTGCTCCATTCCAACACAATTCTCTTGGAATGAAGTTCCAGAAATTCAACTCAAAGATCACAAGCCACTTGTTCAGTTAGAGGGTAACTTAAGCCACAAGTTTCCAGTAACAGGGGAGGAGGTCACGGCATGCATCAAAACAAAACCTTTGTGTGCAGATTACAAGTGTGAATACAAGAGTTCCGTGAGTTCGATAGGATCGGCAGTTGACAACAACACGTTCCCTATTGAACCAGGAAGCCTTATGATGAATGATCCATCAACAGCACCAATTTCAACTACAAATTCGGGATTGAAAACACAAGCATCTAACCTCAACAGCATTTCGGATATGGAATTTTGCCAGAGAAACCTACTTTTGGATGCAGTTTCGCTACCGTTGGACGATGATCTGCATTTTAATTGGCTACATGGGGAATGCTCTAACATCAACTTCAGCCTGCAGAACATAGGGTATTATGATCCAGGGCTTATTGCAGAAATTCCAACTCATTACTATGATTCAGCAGCAGATTATGCAGTCATAGATCAAGGTCTATTCATATCATGA 1560 0.4192 MLKKCSYEVTTCCLARHALHLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKRIHEAREFESFEGFESIHLMRNGLEQCDDGNLFALEDMTSTKKRKDADNKHDDRELIDPSSTKKARVVWSVDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLSRLQKENDLKSSSSIGMNPDLAATDLGSFVGVQNSVSKKQNDVSIDSCSYSEGALQLQNMETKTHEGSSDPNGTISPPATTEKGRTMIRNFVSEKKMRKNQPFDSLEPEGNHTAVIDCSIPTQFSWNEVPEIQLKDHKPLVQLEGNLSHKFPVTGEEVTACIKTKPLCADYKCEYKSSVSSIGSAVDNNTFPIEPGSLMMNDPSTAPISTTNSGLKTQASNLNSISDMEFCQRNLLLDAVSLPLDDDLHFNWLHGECSNINFSLQNIGYYDPGLIAEIPTHYYDSAADYAVIDQGLFIS 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00951 519 SMART REC_2 1 95 IPR001789 GO:0000160
Arst10g00951 519 CDD REC_typeB_ARR-like 1 99 - -
Arst10g00951 519 PIRSF RR_ARR_type-B 1 489 IPR017053 GO:0003677|GO:0003700|GO:0009736
Arst10g00951 519 Pfam Response regulator receiver domain 2 94 IPR001789 GO:0000160
Arst10g00951 519 Gene3D - 165 224 - -
Arst10g00951 519 PANTHER TWO-COMPONENT RESPONSE REGULATOR 1 281 IPR045279 GO:0009736
Arst10g00951 519 Pfam Myb-like DNA-binding domain 167 217 IPR001005 -
Arst10g00951 519 SUPERFAMILY CheY-like 1 111 IPR011006 -
Arst10g00951 519 ProSiteProfiles Response regulatory domain profile. 1 99 IPR001789 GO:0000160
Arst10g00951 519 FunFam Two-component response regulator 161 224 - -
Arst10g00951 519 Gene3D - 1 164 - -
Arst10g00951 519 SUPERFAMILY Homeodomain-like 163 222 IPR009057 -
Arst10g00951 519 NCBIfam myb-like DNA-binding domain, SHAQKYF class 165 218 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00951 Arst-Chr10 9074602 9077859 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00951 18 238 Response Regulator Gene Family AT3G16857 54.508 6.42e-71 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Arst10g00951 Response_reg 2.1e-17 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00951 K14491 - gmx:100797421 702.59