Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00943 ATGGAATGGGAAAGATCGACGACGATAATGGAAGTCAGAAGCTTTTTGGGTTTAGCCGGATATTATAGGAGGTTTATCAAAGGATTTTCCCGGATCGCATTACCGATGACAAAATTGACAAGGAAAGAAGTGCCATTCGTGTGGACATCGGAGTGCGAAGAGATTTTTCAGACTTTGAACCAGAGTATCCTGCTCGCATCCCTTCGGATCTATAGAGCATGCAGGCGCCGATACCTGGACAGTGATCTGAGCACTATATCTCGGGGGTTCCCATATAAGAAATACGAAGGGCGATGTCTCCATGGAGATGTGTTGGGTGAGTTGAGTAGTGTAGAAGATGATAATGCTACAACTGCTAATGGTAGTTATAGTGATGGTGGTGGTGATGATGATGATGGTGATGGTGGTGTTCATGAGAGTTTGCTCTCCTCCGCTCGCGTCTCGCGTCTCTGCCTGCATCTCGCTCGCGTCTCTGTCTCTGTCTCGAGCTGTGCTTCCTGCAGCCGTGAGCTGTGCTTCCCTGATGTGCTCCACTGCTTCCCTGCCGTGAGCTCTCTTCGTGCTCCAAAGGAACTTGAACAGCAAACTATGGCATCTTTCAAAGAAGATCATGGGAAGACACTCATTCCTTCAAGGAAGCCTCAGACAGTAATTGTTGCAAGGAGGCCGGATTCCGGTGGGAAAGAAGGTTCTGTCATCTCTCTTCTAGCCAACCACTTTTTGGTGCAGTTCGATTCATCGCAGAAGATATATCATTACAATGTTGAGATCACTCCGCATCCCTCCAAGGAGGTTGCAAGAGCAATCAAACAGAATTTGGTAGATAGAAATTCTGATCTACTCTCTGGTGCTCTGCCGGCATATGATGGAAGGAAGAACCTGTATAGTCCGGTCGAGTTCCAAAACGATAAGCTCGAATTCTACATAAGCCTTCCAATTCCCACAAGCAAATTGTCATCAAATTATGGAGATGTGTATGACTCGAAAGAGAAGCATGAAAAACTCAAATTGTTTAGGATCAATGTCAAACTAGTTTCCAAGATCAATGGGAAGGAGCTAAGTAGTTACTTGAGCAAAGAGGGTGATGATTGGATTCCCCTTCCACAGGATTATCTCCATGCTTTAGATGTGGTTCTGAGGGAAAGTCCGACCGAGAAATGCATACCTGTAGGAAGGTCTTTCTACTCGAATTCAATGGGAAGAAGCAAAGATATTGGTGGTGGAGCTGTTGGACTGAGAGGTTTCTTTCAGAGTCTTAGGCCAACCCAACAAGGACTTGCTCTAAATGTAGATTTCTCAGTAACTGCTTTCCATGAAAGCATAGGAGTGATACCATACTTGCAGAAACGGCTCGAGTTTCTCCGAGACCTTTCTCAAAAGAAGACAGCACAATTAACTGCTGAAGAGAGGAAGGAAGTGGAAAAGGCATTGAAGAACATCAGGATCTTTGTTTGCCATAGAGAAACGGTTCAAAGGTACCGAGTCTACGGCTTAACTGAGGACATTACTGAAAATCTCTGGTTTGCAGACAGAGATGGAAGGAATCTGAGGCTTTTGACTTACTTCAAAGATCACTATAACTATGACATACAATTTAGGAAACTTCCATGCTTGCAAATTAGCAGGAGTAAGCCTTGTTATCTCCCTATGGAGCTTTGTGTGATCTGTGAAGGCCAGAAGTTCCTCGGAAAACTCTCCGATGATCAAACAGCAAGAATTCTCAAGATGGGGTGCCAAAGACCAGGGGAAAGGAAAACCATCATTGAAGGAGTCATGCGAGGGCAAGTTGGACCCACCAGTGGAGACCAGGAAAGAGAATTCAAACTCAATGTCTCAAGAGAAATGACGAGATTAAATGGGAGAATTCTCCACCCTCCAAAGCTGAAGCTAGGAGAGGGAGGTCATGTGAGGAACCTCACTCCTTCGCGGCATGATCGGCAGTGGAACCTGCTCGATGGCCATGTTTTTGAAGGGACTAAAATCGAAAGGTGGGCGCTCATGAGTTTTGGTGGTACCTCCGAGCAGAAGTCCAATATCCCCAGATTCATAAACCAGTTAACTCAAAGATGTGAACAACTGGGAATTTATCTCAACAAGAACACCGTTATTAGCCCCCAATTTGAATCAAGCCAGGTTCTCAACAATCCCCTCCTTCTGGAATCAAAGCTCAAGAAAATACAGAGGAGCGCCTCAAACAACCTTCAGCTTCTGATCTGCATAATGGAGAGAAAACATAAAGGGTATGCTTTCTTGAAGAGAATAGCCGAGACGAGTGTTGGCGTTGTAAGCCAGTGCTGCCTGTATCCGAATCTGAGCAAGTTAAGTTCACAGTTCTTGGCAAATTTGGCCCTCAAAATCAATGCCAAAGTTGGTGGATGCACGGTTGCTCTCTACAACTCGCTGCCTTCTCAGATACCTCGCCTCTTCCAGATTGACGAGCCGGCAATTTTCATGGGAGCCGATGTAACACATCCTCACCCTCTTGATGATTTTAGTCCATCCGTTGCAGCTGTTGTTGGCAGCATGAATTGGCCAACAGCAAACAAGTACATTTCAAGAATAAGGTCTCAAACACACAGACAAGAAATCATCCAGGATCTTGGCTCAATGGTTGGTGAGTTGCTGGAAGATTTCTACCAGGAAGTAGAGAAACTCCCCGGTCGTATAATCTTCTTTCGCGACGGTGTCAGTGAGACTCAATTCTACAAAGTGCTGCAAGAGGAACTACAATCCATCAGAACAGCATGTTCAAGGTTCCAGGACTACAAACCTCTCATTACTTTTGCCGTCGTGCAGAAGAGGCACCACACAAGGTTGTTTCCCTTTGAACTTGACCAATCCTCAACTCAGAACCATTTCTTGTATGAAAACATCCCTCCAGGGACCGTGGTAGATTCCGTGATCACTCATCCAAAGGAATTCGATTTCTACCTATGCAGCCATTGGGGTGTTAAAGGAACGAGCAGGCCAACACATTACCATGTTTTGTGGGATGAAAACCAATTCACCTCAGATGAACTTCAGAAGCTAGTTTACAATTTGTGCTACACCTTTGTTAGGTGCACCAAACCAATTTCTTTGGTTCCTCCTGCATATTATGCACATTTAGCTGCATATAGAGGAAGACTCTACCTTGAGAGATCTTCAGAATCATTAGGTTTGTTCAAAGGTTCATCAACATTATCAAGAGCTGCTCCTCCAAAAACAGCACCTTTACCTAAACTTAGTGAAAATATCAAGAAGCTAATGTTCTATTGTTAG 3261 0.4474 MEWERSTTIMEVRSFLGLAGYYRRFIKGFSRIALPMTKLTRKEVPFVWTSECEEIFQTLNQSILLASLRIYRACRRRYLDSDLSTISRGFPYKKYEGRCLHGDVLGELSSVEDDNATTANGSYSDGGGDDDDGDGGVHESLLSSARVSRLCLHLARVSVSVSSCASCSRELCFPDVLHCFPAVSSLRAPKELEQQTMASFKEDHGKTLIPSRKPQTVIVARRPDSGGKEGSVISLLANHFLVQFDSSQKIYHYNVEITPHPSKEVARAIKQNLVDRNSDLLSGALPAYDGRKNLYSPVEFQNDKLEFYISLPIPTSKLSSNYGDVYDSKEKHEKLKLFRINVKLVSKINGKELSSYLSKEGDDWIPLPQDYLHALDVVLRESPTEKCIPVGRSFYSNSMGRSKDIGGGAVGLRGFFQSLRPTQQGLALNVDFSVTAFHESIGVIPYLQKRLEFLRDLSQKKTAQLTAEERKEVEKALKNIRIFVCHRETVQRYRVYGLTEDITENLWFADRDGRNLRLLTYFKDHYNYDIQFRKLPCLQISRSKPCYLPMELCVICEGQKFLGKLSDDQTARILKMGCQRPGERKTIIEGVMRGQVGPTSGDQEREFKLNVSREMTRLNGRILHPPKLKLGEGGHVRNLTPSRHDRQWNLLDGHVFEGTKIERWALMSFGGTSEQKSNIPRFINQLTQRCEQLGIYLNKNTVISPQFESSQVLNNPLLLESKLKKIQRSASNNLQLLICIMERKHKGYAFLKRIAETSVGVVSQCCLYPNLSKLSSQFLANLALKINAKVGGCTVALYNSLPSQIPRLFQIDEPAIFMGADVTHPHPLDDFSPSVAAVVGSMNWPTANKYISRIRSQTHRQEIIQDLGSMVGELLEDFYQEVEKLPGRIIFFRDGVSETQFYKVLQEELQSIRTACSRFQDYKPLITFAVVQKRHHTRLFPFELDQSSTQNHFLYENIPPGTVVDSVITHPKEFDFYLCSHWGVKGTSRPTHYHVLWDENQFTSDELQKLVYNLCYTFVRCTKPISLVPPAYYAHLAAYRGRLYLERSSESLGLFKGSSTLSRAAPPKTAPLPKLSENIKKLMFYC 1086
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00943 1086 Gene3D - 808 1086 IPR036397 GO:0003676
Arst10g00943 1086 Pfam Piwi domain 737 1043 IPR003165 GO:0003676
Arst10g00943 1086 Pfam PAZ domain 451 573 IPR003100 GO:0005515
Arst10g00943 1086 FunFam Transposon Tf2-6 polyprotein-like Protein 1 77 - -
Arst10g00943 1086 ProSiteProfiles Piwi domain profile. 736 1046 IPR003165 GO:0003676
Arst10g00943 1086 SMART DUF1785_2 388 440 IPR014811 -
Arst10g00943 1086 Pfam N-terminal domain of argonaute 233 379 IPR032474 -
Arst10g00943 1086 SMART PAZ_2_a_3 448 579 IPR003100 GO:0005515
Arst10g00943 1086 SUPERFAMILY DNA/RNA polymerases 2 71 IPR043502 -
Arst10g00943 1086 CDD Piwi_ago-like 605 1045 IPR045246 -
Arst10g00943 1086 SUPERFAMILY Ribonuclease H-like 721 1046 IPR012337 -
Arst10g00943 1086 SMART Piwi_a_2 736 1046 IPR003165 GO:0003676
Arst10g00943 1086 FunFam protein argonaute 10-like 804 1086 - -
Arst10g00943 1086 FunFam Argonaute 10 622 798 - -
Arst10g00943 1086 SUPERFAMILY PAZ domain 435 593 IPR036085 GO:0005515
Arst10g00943 1086 Gene3D - 1 76 IPR043128 -
Arst10g00943 1086 Gene3D - 622 798 - -
Arst10g00943 1086 MobiDBLite consensus disorder prediction 116 138 - -
Arst10g00943 1086 Pfam Argonaute linker 1 domain 389 438 IPR014811 -
Arst10g00943 1086 CDD PAZ_argonaute_like 443 556 - -
Arst10g00943 1086 Gene3D paz domain 434 561 - -
Arst10g00943 1086 ProSiteProfiles PAZ domain profile. 448 557 IPR003100 GO:0005515
Arst10g00943 1086 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 215 1047 - -
Arst10g00943 1086 FunFam Protein argonaute 7 435 561 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00943 Arst-Chr10 8949253 8963332 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00943 227 1086 Eukaryotic Initiation Factors Gene Family AT1G48410 42.320 0.0 633
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00943 K11593 - gmx:100797755 1658.66