Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00923 ATGGAAGAGGAAATCAAGTCAGAATTCAGAAAAGCCGGGTTCAACCTTGAGGAAGAAGAAGAAATACTGAACAAGTGTATGACTTTCTGCATCAACTACAGCCTCAGCCCTGCAGATCTCGTCTCAAACTGGGAGGTTTATTACCTCAACAGACAACTGAATGAGCCAACAGTGCAAAATGCTGAAATGGATGGCTTTTTGATGCACCTGCAGACTAACAAGAAAGAAGAAGTTATAAAGGAGGAATCTAATTTGCATAGTTACTCTATCAGAGATGTAGAAATGGTCTTAAATAATGATGATGATGCTAAGTTTAGTACTCCTGGGACTCCAACAAATAATGATGAACATCTTCGTTCACCTGCACACGAAGCAATGTCTCTAGCAAATGGGAATATTTTATCTTCTGGAAAACCAACTGAGCTGGTGACACCCTTTTCAAAGCGAACTGATAGGTTTGCTGTGAAATTTAGCATCAACACAGTGCCTGATATAGAGAATGAAATACAAGTGCCGAATCATGAGATCGATGAGGACGATGTTATTAGGAAAGTTATGCCTTGTAAAAGGTGTTCATTGGTGGTTCATAGCTCAGGGCCTAAACCTGGTTGCAGATTCATGCATGATAGGACAGAGGATAGGATGAATGTAATAGAAAATCGAATTCGCAAACATACAAGGGCCCTTGTTGCTTCTGGGCTTTATGGAGAACCAACAGACCCTACAATTGCTTCACAGAGAAGCATTTTTGCTGTTGGTATGGTTTGCTGTGATGCAGAAGGCCGTCTAAATGACAAGTCTGTCATGCTGCAGGGCAGTGTTGAGCATTCTGGAGGAGAATGTGTTCGTCTGGACTTGCAACGCTTAAGCCATTTTTCAATTTTCCCTGGTCAGGTTGTTGGTATTGAAGGGCATAATCCTAGTGGGCATTGCTTAGTTGCATCTAAATTGGTAGATTCTATACCACCTACCTCTGGTGCTGATGATAAGGATTTGAATCCAGCAAAGAAGCTAGCTATTGATAGAAGTCAACCAATTGATATTACTTCTAAAAAGACAGAGTTGTCCATGATTATTGCAGCAGGCCCTTTTACGACAACAGACAATTTATTTTTTGAGCCCCTTGTAGAATTGTTAGCATATGCAAAGCGAAGACAGCCACAGTTACTTATATTGTTGGGACCATTTGTTGATTCTGAACACTCCAACATTAAGAAAGGAACTGTTGACAGAACCTTTGATGAAATATTTCATAACGACATCCTGAGCAAGTTACAAGATTATGTAGAATGTATGGGTTCTGCTGCGCGTGTTCTTCTTGTACCATCTATACGAGATGCGAACCATGATTTTGTTTTCCCTCAGCCTGAACTGGATATCAATCTTCCTGATCTCAAATCTCAGATAATCAGTCTCACTAATCCTGGAATTTTTGAGGCAAACGAGGTCAAAGTTGGTTGCTGCAGTGTAGATATTCTCAAGCAGATCAGTGGGGAAGAGATATCACGAACTGCGCCAGATGGACAACCTACTGATCGCTTGAGTAGGCTTGCAAACCATATTCTTAGCCAGCAAAGCTTTTATCCACTTTATCCGCCGGCAGAAGGTGTTCCTTTGGATTTTTCTCTTGCACCAGAAGCCCTTCACCTCCCGTTGGTTCCAGATCTTCTTATCTTACCTTCGGATATCAAGTACTTTGTCAAGGTGCTTAATGTGGGAAGTGAAGAGACAAACTGCAAGAAATGCATTGCTGTGAATCCAGGAAGACTAGCAAAGGGAGAAGGAGGGGGTACTTTTGTAGAGCTTGATTATCGTGGTGGTTCCGACAAAATTAATGCATCAGTTATTGGCATATGA 1857 0.4141 MEEEIKSEFRKAGFNLEEEEEILNKCMTFCINYSLSPADLVSNWEVYYLNRQLNEPTVQNAEMDGFLMHLQTNKKEEVIKEESNLHSYSIRDVEMVLNNDDDAKFSTPGTPTNNDEHLRSPAHEAMSLANGNILSSGKPTELVTPFSKRTDRFAVKFSINTVPDIENEIQVPNHEIDEDDVIRKVMPCKRCSLVVHSSGPKPGCRFMHDRTEDRMNVIENRIRKHTRALVASGLYGEPTDPTIASQRSIFAVGMVCCDAEGRLNDKSVMLQGSVEHSGGECVRLDLQRLSHFSIFPGQVVGIEGHNPSGHCLVASKLVDSIPPTSGADDKDLNPAKKLAIDRSQPIDITSKKTELSMIIAAGPFTTTDNLFFEPLVELLAYAKRRQPQLLILLGPFVDSEHSNIKKGTVDRTFDEIFHNDILSKLQDYVECMGSAARVLLVPSIRDANHDFVFPQPELDINLPDLKSQIISLTNPGIFEANEVKVGCCSVDILKQISGEEISRTAPDGQPTDRLSRLANHILSQQSFYPLYPPAEGVPLDFSLAPEALHLPLVPDLLILPSDIKYFVKVLNVGSEETNCKKCIAVNPGRLAKGEGGGTFVELDYRGGSDKINASVIGI 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00923 618 PANTHER DNA POLYMERASE 2 ALPHA 70 KDA SUBUNIT 1 608 IPR016722 -
Arst10g00923 618 FunFam DNA polymerase alpha subunit B 1 76 - -
Arst10g00923 618 FunFam DNA polymerase alpha subunit B 339 503 - -
Arst10g00923 618 Coils Coil 208 228 - -
Arst10g00923 618 PIRSF DNA_pol_alpha_2 1 612 IPR016722 -
Arst10g00923 618 Gene3D - 1 74 IPR043034 -
Arst10g00923 618 Gene3D - 340 501 - -
Arst10g00923 618 Gene3D - 508 614 - -
Arst10g00923 618 Pfam DNA polymerase alpha subunit B N-terminal 21 226 IPR013627 -
Arst10g00923 618 Pfam DNA polymerase alpha/epsilon subunit B 358 568 IPR007185 GO:0003677|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00923 Arst-Chr10 8441945 8446861 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00923 2 618 Core DNA Replication Machinery Family AT1G67630 58.387 0.0 743
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00923 K02321 - qsa:O6P43_030564 914.45