Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00876 ATGGCGGAGGAAGAAGAAGTTCAGATTCAAGAAAACGCGGAGTCATCCCGACCCGAATTCCCGACGGGTCGGGTGAAGAAAATAATGAGACTAGACAAGGATGTGAATAGGGTGAGCGGAGAAGCGCTGTTCCTGGTGTCGCGCTCCACCGAGTTGTTTCTCCACTTCCTGGCTGAGAAATCGGCGCGCGTGGCCATCGAGAAGAAGCGCAAAACGGTTACCATTGACCACCTTCGGGTCGCAGTCAAGAGGCACCAACCTAGCAGCGATTTCCTCCTCGACTCGCTCCCTCTGCCTTCTCAGCCCAAAAATCTCCCTCCTTCCACCGCCGCCGACCGGAGAAAAGCTGATAAGCCCGCACCTGCCGGCACTCGTCGCATCGATCAGTTCTTCCGGAAGCCTGAAGTCCAAGTTGCTCCCGTGGCAGATCCTGAAGCCGAAGCTCCTGCGGAAGCTGATGCTGAAGCTAAAGATGCTCCCGAAGCTGATTCTGAAGCCCAAGCTGCTCCTGTGGAAGATCCTGAAGCGGAGCCTTCTGCGGAAGCTGATGCTGAAGCTAAAACTGCTCCCGAAGCTGATTCTGAGGCCCAAGCTACTGGAGCTGAAGCTGACGCCGGAGCTGAAGTTGCTGCCGAAGCTGAAGCGGCAGTTCACGTAGATGAGTGTTAG 669 0.5605 MAEEEEVQIQENAESSRPEFPTGRVKKIMRLDKDVNRVSGEALFLVSRSTELFLHFLAEKSARVAIEKKRKTVTIDHLRVAVKRHQPSSDFLLDSLPLPSQPKNLPPSTAADRRKADKPAPAGTRRIDQFFRKPEVQVAPVADPEAEAPAEADAEAKDAPEADSEAQAAPVEDPEAEPSAEADAEAKTAPEADSEAQATGAEADAGAEVAAEAEAAVHVDEC 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00876 222 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 19 82 IPR003958 -
Arst10g00876 222 SUPERFAMILY Histone-fold 6 98 IPR009072 GO:0046982
Arst10g00876 222 MobiDBLite consensus disorder prediction 1 22 - -
Arst10g00876 222 MobiDBLite consensus disorder prediction 110 132 - -
Arst10g00876 222 MobiDBLite consensus disorder prediction 90 222 - -
Arst10g00876 222 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 8 156 - -
Arst10g00876 222 Gene3D Histone, subunit A 1 97 IPR009072 GO:0046982
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00876 9 133 CCAAT-HAP5 Transcription Factor Family AT5G43250 64.062 5.09e-52 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Arst10g00876 CBFD_NFYB_HMF 1.4e-18 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00876 - - adu:107468882 303.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g00876 10 7854759 7855716 Arst10g00876 10 7854759 7855716 ECH