Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Arst10g00810 | ATGGATGTGGCATCAACGATCCCTTACGAGGCACTCTCTCTCTTGTTTACCGGCAAACACTATGTCTCCCTCCCTTACTACCTCCTTGGCCTCCTCCGCTTTTGGCGTCTCCGCCGTGTCAAACAATTCTTCACAAGGCTTGAGAAAGACATAAGGTTCAGCTATTTCTGGATCCGATGTGCTAGACTTCTCTCTGTAACAGTATTTTCAGTTCATTGTGGTGGGTGCTTGTATTACATGCTGGCTGATAGGTACCCTCATAAAGGGAAGACATGGATTGGAGCAGTAAATCCAAACTTCAGACAGACAAGCCTTTGGATCAGATACATCTCTGCCATGTATTGGTCTATCACCACCATGTCCACCGTTGGCTATGGCGACCTCCACGCTGTTAACACCCTCGAAATGATCTTCATCATTTTCTACATGCTCTTCAACCTCGGCCTAACTGCTTACTTGATTGGTAACATGACTAACCTTGTTGTCGAAGGAACTCGCCGTACCATGGAATTTAGAAATAGCATTGAATCAGCATCAAACTTTGTGTCCCGAAATCGATTGCCTCCGAGGTTAAAGGAGCAGATCCTGGCTTACATGTGTTTGAGATTCAAAGCGGAGAGTTTGAATCAGCATCATCTCATTGAGCAACTACCAAAATCAATTTGCCAGAGCATCTGCCAGCATTTGTTCTATGAAACTGCAGCAAAAGCTTATCTTTTCAAAGGTGTCTCAAAAGAAATTCTCTTGTCCTTGGTTGCGAAAATGAAGGCAGAGTACCTGCCTCCTAGAGAGGATGTTATTATGCAAAACGAAGCGCCGGATGATGTTTACATCATAGTTTCTGGGGAAGTAGAGTTCATTGATTGTGTAATGGAGAAAGAGAGAGTCTTGGGGACTCTACAAACAGGGGACATGTTTGGAGAAGTTGGTGCACTTTGCTGCAGACCTCAGAGCTTTACCTTTAGAACAAAGACTCTCACACAGCTTCTAAGGCTGAAAACTAGTACACTGATTGAAACAATGCAGGTTAAGAAAGAAGACAATATACAAATACTCAAGAATTTCCAAATGCAGCATTTCAAGCAGCTTAAGGATCTTAGTATCAGAGATTTAATGGTGGAGAGTGTGGAAGAAGAGGATCCTGACATGGCTGTGAACTTGTTGACTGTGGCCACCACAGGCAATGCTGTTTTTCTTGAGGAGCTTCTAAGAGCAGGTTTGGATCCTGACATTGGAGACTCAGAAGGGAAAACCCCATTGCACATAGCAGCATCAAATGGGCATGAAGATTGTGTTAAAGTTTTACTTAAGCATGCATGTAACTTACATTTGAGAGATATCAATGGTAACACAGCACTATGGGATGCTATAGCATCAAAGCATTACTCCATATTCAGAATCCTCTACCAGCTTGCTGCTCTCTCCGATCCACACACGCCGGGTGATCTCCTATGCACAGCAGCAAAAAGAAATGATTTAGTAGTGATGAAGGAGCTCTTAAAGCTAGGATTGAACATTAACTCCAATGATCACCAAGGAATGTCAGCAATCCAAATTGCCATGCAAGAAAACCATGTGGACATGGTTGAATTGCTTGTCATGAATGGAGCAGATGCCAATGGTGTATGTACTAATGGATTTTCTGCATTAGCCTTAAATGAAATGCTGCGAAAGCGCGAAGTTGGTCATCGAATCAATGTGAATGAGGCCATACAATGTGATTTTGTGTCAGAAGGGAAACACCAAGAAGATCAAAAGAACAATAAGGGAAGTTCAAATGGATTCAACTGCCCAAGAATAAGCATATATAGAGGTCACCCTATACAGAGAAGAGGAAAAGGTTCCATGGAACCTGGGAAGTTAATAAGGTTACCTGATTCATTAGAGGATCTCAAAACTATTGCAGGTAAAAAATTTGGGTTTGATGCAAAAGATGCAATGGTAACAGATGAAGAAGGAGCTGAGATAGATTGTATTGATGTCATCAGAGATAATGATAAGATTTTTGTTGTTTTATAG | 2019 | 0.42 | MDVASTIPYEALSLLFTGKHYVSLPYYLLGLLRFWRLRRVKQFFTRLEKDIRFSYFWIRCARLLSVTVFSVHCGGCLYYMLADRYPHKGKTWIGAVNPNFRQTSLWIRYISAMYWSITTMSTVGYGDLHAVNTLEMIFIIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIESASNFVSRNRLPPRLKEQILAYMCLRFKAESLNQHHLIEQLPKSICQSICQHLFYETAAKAYLFKGVSKEILLSLVAKMKAEYLPPREDVIMQNEAPDDVYIIVSGEVEFIDCVMEKERVLGTLQTGDMFGEVGALCCRPQSFTFRTKTLTQLLRLKTSTLIETMQVKKEDNIQILKNFQMQHFKQLKDLSIRDLMVESVEEEDPDMAVNLLTVATTGNAVFLEELLRAGLDPDIGDSEGKTPLHIAASNGHEDCVKVLLKHACNLHLRDINGNTALWDAIASKHYSIFRILYQLAALSDPHTPGDLLCTAAKRNDLVVMKELLKLGLNINSNDHQGMSAIQIAMQENHVDMVELLVMNGADANGVCTNGFSALALNEMLRKREVGHRINVNEAIQCDFVSEGKHQEDQKNNKGSSNGFNCPRISIYRGHPIQRRGKGSMEPGKLIRLPDSLEDLKTIAGKKFGFDAKDAMVTDEEGAEIDCIDVIRDNDKIFVVL | 672 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Arst10g00810 | 672 | Gene3D | - | 1 | 162 | - | - | |
Arst10g00810 | 672 | SMART | ANK_2a | 415 | 444 | IPR002110 | GO:0005515 | |
Arst10g00810 | 672 | SMART | ANK_2a | 512 | 541 | IPR002110 | GO:0005515 | |
Arst10g00810 | 672 | SMART | ANK_2a | 483 | 508 | IPR002110 | GO:0005515 | |
Arst10g00810 | 672 | SMART | ANK_2a | 382 | 411 | IPR002110 | GO:0005515 | |
Arst10g00810 | 672 | SMART | ANK_2a | 448 | 479 | IPR002110 | GO:0005515 | |
Arst10g00810 | 672 | Gene3D | - | 384 | 563 | IPR036770 | - | |
Arst10g00810 | 672 | Pfam | Ankyrin repeats (many copies) | 483 | 533 | IPR002110 | GO:0005515 | |
Arst10g00810 | 672 | ProSiteProfiles | KHA domain profile. | 599 | 672 | IPR021789 | - | |
Arst10g00810 | 672 | CDD | CAP_ED | 239 | 352 | IPR000595 | - | |
Arst10g00810 | 672 | ProSiteProfiles | Ankyrin repeat profile. | 512 | 540 | IPR002110 | GO:0005515 | |
Arst10g00810 | 672 | Pfam | Ankyrin repeats (3 copies) | 394 | 470 | IPR002110 | GO:0005515 | |
Arst10g00810 | 672 | Pfam | Ion transport protein | 24 | 168 | IPR005821 | GO:0005216|GO:0006811|GO:0016020|GO:0055085 | |
Arst10g00810 | 672 | PRINTS | EAG/ELK/ERG potassium channel family signature | 135 | 146 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Arst10g00810 | 672 | PRINTS | EAG/ELK/ERG potassium channel family signature | 109 | 126 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Arst10g00810 | 672 | PRINTS | EAG/ELK/ERG potassium channel family signature | 153 | 162 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Arst10g00810 | 672 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 239 | 358 | IPR000595 | - | |
Arst10g00810 | 672 | ProSiteProfiles | Ankyrin repeat region circular profile. | 512 | 540 | - | - | |
Arst10g00810 | 672 | SUPERFAMILY | cAMP-binding domain-like | 166 | 354 | IPR018490 | - | |
Arst10g00810 | 672 | SUPERFAMILY | Voltage-gated potassium channels | 32 | 200 | - | - | |
Arst10g00810 | 672 | ProSiteProfiles | Ankyrin repeat region circular profile. | 415 | 446 | - | - | |
Arst10g00810 | 672 | Pfam | KHA, dimerisation domain of potassium ion channel | 599 | 670 | IPR021789 | - | |
Arst10g00810 | 672 | Gene3D | Jelly Rolls | 206 | 378 | IPR014710 | - | |
Arst10g00810 | 672 | Pfam | Cyclic nucleotide-binding domain | 259 | 342 | IPR000595 | - | |
Arst10g00810 | 672 | ProSiteProfiles | Ankyrin repeat profile. | 415 | 447 | IPR002110 | GO:0005515 | |
Arst10g00810 | 672 | PANTHER | POTASSIUM CHANNEL AKT1 | 1 | 670 | IPR045319 | GO:0005249|GO:0006813 | |
Arst10g00810 | 672 | SMART | cnmp_10 | 239 | 356 | IPR000595 | - | |
Arst10g00810 | 672 | PRINTS | Ankyrin repeat signature | 528 | 542 | IPR002110 | GO:0005515 | |
Arst10g00810 | 672 | PRINTS | Ankyrin repeat signature | 416 | 431 | IPR002110 | GO:0005515 | |
Arst10g00810 | 672 | FunFam | Potassium channel KAT2 | 227 | 364 | - | - | |
Arst10g00810 | 672 | SUPERFAMILY | Ankyrin repeat | 385 | 552 | IPR036770 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Arst10g00810 | Arst-Chr10 | 6828810 | 6833693 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Arst10g00810 | 1 | 420 | Ion Channels | AT4G22200 | 73.821 | 0.0 | 649 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Arst10g00810 | K21867 | - | gmx:100798422 | 1087.4 |