Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00810 ATGGATGTGGCATCAACGATCCCTTACGAGGCACTCTCTCTCTTGTTTACCGGCAAACACTATGTCTCCCTCCCTTACTACCTCCTTGGCCTCCTCCGCTTTTGGCGTCTCCGCCGTGTCAAACAATTCTTCACAAGGCTTGAGAAAGACATAAGGTTCAGCTATTTCTGGATCCGATGTGCTAGACTTCTCTCTGTAACAGTATTTTCAGTTCATTGTGGTGGGTGCTTGTATTACATGCTGGCTGATAGGTACCCTCATAAAGGGAAGACATGGATTGGAGCAGTAAATCCAAACTTCAGACAGACAAGCCTTTGGATCAGATACATCTCTGCCATGTATTGGTCTATCACCACCATGTCCACCGTTGGCTATGGCGACCTCCACGCTGTTAACACCCTCGAAATGATCTTCATCATTTTCTACATGCTCTTCAACCTCGGCCTAACTGCTTACTTGATTGGTAACATGACTAACCTTGTTGTCGAAGGAACTCGCCGTACCATGGAATTTAGAAATAGCATTGAATCAGCATCAAACTTTGTGTCCCGAAATCGATTGCCTCCGAGGTTAAAGGAGCAGATCCTGGCTTACATGTGTTTGAGATTCAAAGCGGAGAGTTTGAATCAGCATCATCTCATTGAGCAACTACCAAAATCAATTTGCCAGAGCATCTGCCAGCATTTGTTCTATGAAACTGCAGCAAAAGCTTATCTTTTCAAAGGTGTCTCAAAAGAAATTCTCTTGTCCTTGGTTGCGAAAATGAAGGCAGAGTACCTGCCTCCTAGAGAGGATGTTATTATGCAAAACGAAGCGCCGGATGATGTTTACATCATAGTTTCTGGGGAAGTAGAGTTCATTGATTGTGTAATGGAGAAAGAGAGAGTCTTGGGGACTCTACAAACAGGGGACATGTTTGGAGAAGTTGGTGCACTTTGCTGCAGACCTCAGAGCTTTACCTTTAGAACAAAGACTCTCACACAGCTTCTAAGGCTGAAAACTAGTACACTGATTGAAACAATGCAGGTTAAGAAAGAAGACAATATACAAATACTCAAGAATTTCCAAATGCAGCATTTCAAGCAGCTTAAGGATCTTAGTATCAGAGATTTAATGGTGGAGAGTGTGGAAGAAGAGGATCCTGACATGGCTGTGAACTTGTTGACTGTGGCCACCACAGGCAATGCTGTTTTTCTTGAGGAGCTTCTAAGAGCAGGTTTGGATCCTGACATTGGAGACTCAGAAGGGAAAACCCCATTGCACATAGCAGCATCAAATGGGCATGAAGATTGTGTTAAAGTTTTACTTAAGCATGCATGTAACTTACATTTGAGAGATATCAATGGTAACACAGCACTATGGGATGCTATAGCATCAAAGCATTACTCCATATTCAGAATCCTCTACCAGCTTGCTGCTCTCTCCGATCCACACACGCCGGGTGATCTCCTATGCACAGCAGCAAAAAGAAATGATTTAGTAGTGATGAAGGAGCTCTTAAAGCTAGGATTGAACATTAACTCCAATGATCACCAAGGAATGTCAGCAATCCAAATTGCCATGCAAGAAAACCATGTGGACATGGTTGAATTGCTTGTCATGAATGGAGCAGATGCCAATGGTGTATGTACTAATGGATTTTCTGCATTAGCCTTAAATGAAATGCTGCGAAAGCGCGAAGTTGGTCATCGAATCAATGTGAATGAGGCCATACAATGTGATTTTGTGTCAGAAGGGAAACACCAAGAAGATCAAAAGAACAATAAGGGAAGTTCAAATGGATTCAACTGCCCAAGAATAAGCATATATAGAGGTCACCCTATACAGAGAAGAGGAAAAGGTTCCATGGAACCTGGGAAGTTAATAAGGTTACCTGATTCATTAGAGGATCTCAAAACTATTGCAGGTAAAAAATTTGGGTTTGATGCAAAAGATGCAATGGTAACAGATGAAGAAGGAGCTGAGATAGATTGTATTGATGTCATCAGAGATAATGATAAGATTTTTGTTGTTTTATAG 2019 0.42 MDVASTIPYEALSLLFTGKHYVSLPYYLLGLLRFWRLRRVKQFFTRLEKDIRFSYFWIRCARLLSVTVFSVHCGGCLYYMLADRYPHKGKTWIGAVNPNFRQTSLWIRYISAMYWSITTMSTVGYGDLHAVNTLEMIFIIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIESASNFVSRNRLPPRLKEQILAYMCLRFKAESLNQHHLIEQLPKSICQSICQHLFYETAAKAYLFKGVSKEILLSLVAKMKAEYLPPREDVIMQNEAPDDVYIIVSGEVEFIDCVMEKERVLGTLQTGDMFGEVGALCCRPQSFTFRTKTLTQLLRLKTSTLIETMQVKKEDNIQILKNFQMQHFKQLKDLSIRDLMVESVEEEDPDMAVNLLTVATTGNAVFLEELLRAGLDPDIGDSEGKTPLHIAASNGHEDCVKVLLKHACNLHLRDINGNTALWDAIASKHYSIFRILYQLAALSDPHTPGDLLCTAAKRNDLVVMKELLKLGLNINSNDHQGMSAIQIAMQENHVDMVELLVMNGADANGVCTNGFSALALNEMLRKREVGHRINVNEAIQCDFVSEGKHQEDQKNNKGSSNGFNCPRISIYRGHPIQRRGKGSMEPGKLIRLPDSLEDLKTIAGKKFGFDAKDAMVTDEEGAEIDCIDVIRDNDKIFVVL 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00810 672 Gene3D - 1 162 - -
Arst10g00810 672 SMART ANK_2a 415 444 IPR002110 GO:0005515
Arst10g00810 672 SMART ANK_2a 512 541 IPR002110 GO:0005515
Arst10g00810 672 SMART ANK_2a 483 508 IPR002110 GO:0005515
Arst10g00810 672 SMART ANK_2a 382 411 IPR002110 GO:0005515
Arst10g00810 672 SMART ANK_2a 448 479 IPR002110 GO:0005515
Arst10g00810 672 Gene3D - 384 563 IPR036770 -
Arst10g00810 672 Pfam Ankyrin repeats (many copies) 483 533 IPR002110 GO:0005515
Arst10g00810 672 ProSiteProfiles KHA domain profile. 599 672 IPR021789 -
Arst10g00810 672 CDD CAP_ED 239 352 IPR000595 -
Arst10g00810 672 ProSiteProfiles Ankyrin repeat profile. 512 540 IPR002110 GO:0005515
Arst10g00810 672 Pfam Ankyrin repeats (3 copies) 394 470 IPR002110 GO:0005515
Arst10g00810 672 Pfam Ion transport protein 24 168 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Arst10g00810 672 PRINTS EAG/ELK/ERG potassium channel family signature 135 146 IPR003938 GO:0005249|GO:0006813|GO:0016020
Arst10g00810 672 PRINTS EAG/ELK/ERG potassium channel family signature 109 126 IPR003938 GO:0005249|GO:0006813|GO:0016020
Arst10g00810 672 PRINTS EAG/ELK/ERG potassium channel family signature 153 162 IPR003938 GO:0005249|GO:0006813|GO:0016020
Arst10g00810 672 ProSiteProfiles cAMP/cGMP binding motif profile. 239 358 IPR000595 -
Arst10g00810 672 ProSiteProfiles Ankyrin repeat region circular profile. 512 540 - -
Arst10g00810 672 SUPERFAMILY cAMP-binding domain-like 166 354 IPR018490 -
Arst10g00810 672 SUPERFAMILY Voltage-gated potassium channels 32 200 - -
Arst10g00810 672 ProSiteProfiles Ankyrin repeat region circular profile. 415 446 - -
Arst10g00810 672 Pfam KHA, dimerisation domain of potassium ion channel 599 670 IPR021789 -
Arst10g00810 672 Gene3D Jelly Rolls 206 378 IPR014710 -
Arst10g00810 672 Pfam Cyclic nucleotide-binding domain 259 342 IPR000595 -
Arst10g00810 672 ProSiteProfiles Ankyrin repeat profile. 415 447 IPR002110 GO:0005515
Arst10g00810 672 PANTHER POTASSIUM CHANNEL AKT1 1 670 IPR045319 GO:0005249|GO:0006813
Arst10g00810 672 SMART cnmp_10 239 356 IPR000595 -
Arst10g00810 672 PRINTS Ankyrin repeat signature 528 542 IPR002110 GO:0005515
Arst10g00810 672 PRINTS Ankyrin repeat signature 416 431 IPR002110 GO:0005515
Arst10g00810 672 FunFam Potassium channel KAT2 227 364 - -
Arst10g00810 672 SUPERFAMILY Ankyrin repeat 385 552 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00810 Arst-Chr10 6828810 6833693 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00810 1 420 Ion Channels AT4G22200 73.821 0.0 649
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00810 K21867 - gmx:100798422 1087.4