Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00809 ATGGAGAGGAACAATTTGAGTAGTTCATATGATCCTCATCACATAGTGAAGGAGTGTGAGAAGAAGAAGAATGATCATGATCATTTGGGAGGTTCATCAAGGAACATGTCTTTCAATCTGAGGAATGTTTCAAAGCTCATTCTTCCACCACTTGGAGTTTCTTCCAACAATCAGAACCATGTTGAATCAAGAGCCTGGATCATATCACCAATGGATTCAAGATACAGGTGTTGGGAGAGTTTTATGGTTGTTCTGGTAGCATACTCTGCATGGGTGTATCCATTTGAAGTAGCATTCATGCACTCATCTCCAGAATACAGGAGAATCTACATTGTTGACACTGTTGTTGACCTTTTCTTTGCCGTTGACATTGTGTTGACCTTCTTCTTGGCTTACATAGATCGAACTACTCATCTATTAGTTCAGGACTCCAGAAAGATTGCATTCAGGTACTTGTCAACATGGTTGGTAATGGATGTGGCATCAACGATCCCTTACGAGGCACTCTCTCTCTTGTTTACCGGCAAACACTATGTCTCCCTCCCTTACTACCTCCTTGGCCTCCTCCGCTTTTGGCGTCTCCGCCGTGTCAAACAATTCTTCACAAGGCTTGAGAAAGACATAAGGTTCAGCTATTTCTGGATCCGATGTGCTAGACTTCTCTCTGTAACAGTATTTTCAGTTCATTGTGGTGGGTGCTTGTATTACATGCTGGCTGATAGGTACCCTCATAAAGGGAAGACATGGATTGGAGCAGTAAATCCAAACTTCAGACAGACAAGCCTTTGGATCAGATACATCTCTGCCATGTATTGGTCTATCACCACCATGTCCACCGTTGGCTATGGCGACCTCCACGCTGTTAACACCCTCGAAATGATCTTCATCATTTTCTACATGCTCTTCAACCTCGGCCTAACTGCTTACTTGATTGGTAACATGACTAACCTTGTTGTCGAAGGAACTCGCCGTACCATGGAATTTAGAAATAGCATTGAATCAGCATCAAACTTTGTGTCCCGAAATCGATTGCCTCCGAGGTTAAAGGAGCAGATCCTGGCTTACATGTGTTTGAGATTCAAAGCGGAGAGTTTGAATCAGCATCATCTCATTGAGCAACTACCAAAATCAATTTGCCAGAGCATCTGCCAGCATTTGTTCTATGAAACTGCAGCAAAAGCTTATCTTTTCAAAGGTGTCTCAAAAGAAATTCTCTTGTCCTTGGTTGCGAAAATGAAGGCAGAGTACCTGCCTCCTAGAGAGGATGTTATTATGCAAAACGAAGCGCCGGATGATGTTTACATCATAGTTTCTGGGGAAGTAGAGTTCATTGATTGTGTAATGGAGAAAGAGAGAGTCTTGGGGACTCTACAAACAGGGGACATGTTTGGAGAAGTTGGTGCACTTTGCTGCAGACCTCAGAGCTTTACCTTTAGAACAAAGACTCTCACACAGCTTCTAAGGCTGAAAACTAGTACACTGATTGAAACAATGCAGGTTAAGAAAGAAGACAATATACAAATACTCAAGAATTTCCAAATGCAGCATTTCAAGCAGCTTAAGGATCTTAGTATCAGAGATTTAATGGTGGAGAGTGTGGAAGAAGAGGATCCTGACATGGCTGTGAACTTGTTGACTGTGGCCACCACAGGCAATGCTGTTTTTCTTGAGGAGCTTCTAAGAGCAGGTTTGGATCCTGACATTGGAGACTCAGAAGGGAAAACCCCATTGCACATAGCAGCATCAAATGGGCATGAAGATTGTGTTAAAGTTTTACTTAAGCATGCATGTAACTTACATTTGAGAGATATCAATGGTAACACAGCACTATGGGATGCTATAGCATCAAAGCATTACTCCATATTCAGAATCCTCTACCAGCTTGCTGCTCTCTCCGATCCACACACGCCGGGTGATCTCCTATGCACAGCAGCAAAAAGAAATGATTTAGTAGTGATGAAGGAGCTCTTAAAGCTAGGATTGAACATTAACTCCAATGATCACCAAGGAATGTCAGCAATCCAAATTGCCATGCAAGAAAACCATGTGGACATGGTTGAATTGCTTGTCATGAATGGAGCAGATGCCAATGGTGTATGTACTAATGGATTTTCTGCATTAGCCTTAAATGAAATGCTGCGAAAGCGCGAAGTTGGTCATCGAATCAATGTGAATGAGGCCATACAATGTGATTTTGTGTCAGAAGGGAAACACCAAGAAGATCAAAAGAACAATAAGGGAAGTTCAAATGGATTCAACTGCCCAAGAATAAGCATATATAGAGGTCACCCTATACAGAGAAGAGGAAAAGGTTCCATGGAACCTGGGAAGTTAATAAGGTTACCTGATTCATTAGAGGATCTCAAAACTATTGCAGGTAAAAAATTTGGGTTTGATGCAAAAGATGCAATGGTAACAGATGAAGAAGGAGCTGAGATAGATTGTATTGATGTCATCAGAGATAATGATAAGATTTTTGTTGTTTTATAG 2490 0.4165 MERNNLSSSYDPHHIVKECEKKKNDHDHLGGSSRNMSFNLRNVSKLILPPLGVSSNNQNHVESRAWIISPMDSRYRCWESFMVVLVAYSAWVYPFEVAFMHSSPEYRRIYIVDTVVDLFFAVDIVLTFFLAYIDRTTHLLVQDSRKIAFRYLSTWLVMDVASTIPYEALSLLFTGKHYVSLPYYLLGLLRFWRLRRVKQFFTRLEKDIRFSYFWIRCARLLSVTVFSVHCGGCLYYMLADRYPHKGKTWIGAVNPNFRQTSLWIRYISAMYWSITTMSTVGYGDLHAVNTLEMIFIIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIESASNFVSRNRLPPRLKEQILAYMCLRFKAESLNQHHLIEQLPKSICQSICQHLFYETAAKAYLFKGVSKEILLSLVAKMKAEYLPPREDVIMQNEAPDDVYIIVSGEVEFIDCVMEKERVLGTLQTGDMFGEVGALCCRPQSFTFRTKTLTQLLRLKTSTLIETMQVKKEDNIQILKNFQMQHFKQLKDLSIRDLMVESVEEEDPDMAVNLLTVATTGNAVFLEELLRAGLDPDIGDSEGKTPLHIAASNGHEDCVKVLLKHACNLHLRDINGNTALWDAIASKHYSIFRILYQLAALSDPHTPGDLLCTAAKRNDLVVMKELLKLGLNINSNDHQGMSAIQIAMQENHVDMVELLVMNGADANGVCTNGFSALALNEMLRKREVGHRINVNEAIQCDFVSEGKHQEDQKNNKGSSNGFNCPRISIYRGHPIQRRGKGSMEPGKLIRLPDSLEDLKTIAGKKFGFDAKDAMVTDEEGAEIDCIDVIRDNDKIFVVL 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00809 829 Pfam Ion transport protein 76 325 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Arst10g00809 829 Gene3D - 541 720 IPR036770 -
Arst10g00809 829 ProSiteProfiles Ankyrin repeat profile. 669 697 IPR002110 GO:0005515
Arst10g00809 829 Pfam Ankyrin repeats (3 copies) 551 627 IPR002110 GO:0005515
Arst10g00809 829 SUPERFAMILY cAMP-binding domain-like 323 511 IPR018490 -
Arst10g00809 829 PANTHER POTASSIUM CHANNEL AKT1 39 827 IPR045319 GO:0005249|GO:0006813
Arst10g00809 829 SMART cnmp_10 396 513 IPR000595 -
Arst10g00809 829 CDD CAP_ED 396 509 IPR000595 -
Arst10g00809 829 ProSiteProfiles Ankyrin repeat region circular profile. 669 697 - -
Arst10g00809 829 PRINTS Ankyrin repeat signature 573 588 IPR002110 GO:0005515
Arst10g00809 829 PRINTS Ankyrin repeat signature 685 699 IPR002110 GO:0005515
Arst10g00809 829 SUPERFAMILY Ankyrin repeat 542 709 IPR036770 -
Arst10g00809 829 SMART ANK_2a 572 601 IPR002110 GO:0005515
Arst10g00809 829 SMART ANK_2a 669 698 IPR002110 GO:0005515
Arst10g00809 829 SMART ANK_2a 640 665 IPR002110 GO:0005515
Arst10g00809 829 SMART ANK_2a 539 568 IPR002110 GO:0005515
Arst10g00809 829 SMART ANK_2a 605 636 IPR002110 GO:0005515
Arst10g00809 829 Gene3D - 76 319 - -
Arst10g00809 829 PRINTS EAG/ELK/ERG potassium channel family signature 124 133 IPR003938 GO:0005249|GO:0006813|GO:0016020
Arst10g00809 829 PRINTS EAG/ELK/ERG potassium channel family signature 266 283 IPR003938 GO:0005249|GO:0006813|GO:0016020
Arst10g00809 829 PRINTS EAG/ELK/ERG potassium channel family signature 292 303 IPR003938 GO:0005249|GO:0006813|GO:0016020
Arst10g00809 829 PRINTS EAG/ELK/ERG potassium channel family signature 113 123 IPR003938 GO:0005249|GO:0006813|GO:0016020
Arst10g00809 829 PRINTS EAG/ELK/ERG potassium channel family signature 310 319 IPR003938 GO:0005249|GO:0006813|GO:0016020
Arst10g00809 829 ProSiteProfiles Ankyrin repeat profile. 572 604 IPR002110 GO:0005515
Arst10g00809 829 ProSiteProfiles KHA domain profile. 756 829 IPR021789 -
Arst10g00809 829 FunFam Potassium channel KAT2 384 521 - -
Arst10g00809 829 SUPERFAMILY Voltage-gated potassium channels 70 319 - -
Arst10g00809 829 Pfam KHA, dimerisation domain of potassium ion channel 756 827 IPR021789 -
Arst10g00809 829 FunFam Potassium channel KAT3 77 320 - -
Arst10g00809 829 Pfam Cyclic nucleotide-binding domain 416 499 IPR000595 -
Arst10g00809 829 Pfam Ankyrin repeats (many copies) 640 690 IPR002110 GO:0005515
Arst10g00809 829 ProSiteProfiles cAMP/cGMP binding motif profile. 396 515 IPR000595 -
Arst10g00809 829 Gene3D Jelly Rolls 363 534 IPR014710 -
Arst10g00809 829 ProSiteProfiles Ankyrin repeat region circular profile. 572 603 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00809 Arst-Chr10 6827467 6833692 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00809 21 577 Ion Channels AT4G22200 71.327 0.0 830
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00809 K21867 - gmx:100798422 1287.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g00809 10 6827467 6833692 Arst10g00809 10 6827467 6833692 ECH