Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00806 ATGGATAATCCAAAAATTGGAGAATTAGAGTTGAAGAAAACAGCTCTCATTAACACTCTTCCCGATCCAAGAGGCGGCAAGAGATGCTTCGTGGCCTCTATCTGCAGCCTTGGTTCAGATGGCAGTGCAAGCGGCATGCTCGGTGGCCGGCGCCGTCGCAACCGGCGGCATGAAAGAAGAGTGGTTCTGCATAGTGATGATCGGAATAGATACTGCACAAATTATTATTGCAAGACAACAAGATCTCCAATGTGGCGCAAGGGACCTCTCGGATATAAGACTTTGTGTAATGCGTGTGGGATTGATTACATGAAGCAGGTTACGAGCAGAGGCAGTGAGATTGCTACACTTCCAGATGAGGCAGAATTAGGATCAGATCATTCAAAATCACAAGGCTCTGCAGATGTTTAA 411 0.4672 MDNPKIGELELKKTALINTLPDPRGGKRCFVASICSLGSDGSASGMLGGRRRRNRRHERRVVLHSDDRNRYCTNYYCKTTRSPMWRKGPLGYKTLCNACGIDYMKQVTSRGSEIATLPDEAELGSDHSKSQGSADV 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00806 136 SMART GATA_3 66 119 IPR000679 GO:0006355|GO:0043565
Arst10g00806 136 Gene3D - 62 120 IPR013088 GO:0006355|GO:0008270
Arst10g00806 136 Pfam GATA zinc finger 77 105 IPR000679 GO:0006355|GO:0043565
Arst10g00806 136 ProSiteProfiles GATA-type zinc finger domain profile. 77 110 IPR000679 GO:0006355|GO:0043565
Arst10g00806 136 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 64 112 - -
Arst10g00806 136 MobiDBLite consensus disorder prediction 117 136 - -
Arst10g00806 136 CDD ZnF_GATA 72 105 IPR000679 GO:0006355|GO:0043565
Arst10g00806 136 PANTHER OS01G0976800 PROTEIN 65 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00806 Arst-Chr10 6749214 6750177 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00806 70 106 C2C2-Gata Transcription Factor Family AT3G20750 56.757 9.58e-11 55.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Arst10g00806 GATA 1.3e-11 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00806 - - adu:110276499 271.166