Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00798 ATGAGCAAAGCAGGTGCTACTCCCAAAACAGAATCTGAAGGGGCCTCGGCTTCTCAGATTAGAACTTTGACGAGCTTGCAATCAACAATTTCCTCACTTGAATTGATAAATAGTTTGAGGAGGAAGAGGGATTTGATGAGCCTCTTGTGTAGTTACCCGCTGGACATGAGAGTGATCTTTGATGATTTCATATCAAAGCCATATTGTGAGAGCAAGCTGCCGCTTAAACTAGAAGGACTTCTTCCAAAGGAGATAATAAGGGATGCTGAAAATGGTGATAGGTCCGGCTCCAACTTCATCTTCGGTGATGCCAACTTGGACTTCATTCCAGAAGCTATTCTCGATATGGCTGCTGATCTTGCTGTCCACCAACTCATGGAAACATTGATTTCCATTTGTAAAAGCAAAAATCCAAAGCATGCAAAATGCATCAGGTTATCAACAAGAAGTGATGTTGAAAAGAGAACAGTCATGGAAAAAGTAACTGCAGCCTTGAATGACAAGCATCATTCACTTGACATTCTTAATTCATTTCATGGACATCTGACTATTGATGCCACCGGATATCCAACTTCAGAAGCAGAGAAGGAACTTAAGCAACATATCTGTCAACTACTTCAGCTTTCAACTATTAAATACGATGACATCTTGTGCACCCTACAGATTGAAGACGAGATGTCAAGAAGCAGGTATCTAGTAATTCTTGTAGATAGGGATGGTGAGGAAATTGTTGATCCACAAAAAGTGGGACTTTATGGTACTCTACTGACAGGAGTTTTGGTACTCATTACCACTGACTCACCATCATCTCAACAGGCTAAAGAAGGAGGATTGAAGGATGGGTTAGTGAACTTGGAAATACGGACAAAAGAACATTTGCTGCCATGGGTGGTCTTCTGTGACACTGCGGGGAAGGAGTTTGTATATTCATCAGATGCCATCCTGACAACTGCAGTGCGCATAGTTGAGGAGTGTCGTAGCCACCTTCATGCAATTCTCCTCGTGGCAAAGTGGTTGAAGAATCATCAAGATGTCAGAATGTGGGAACTTGCTCTCCACAAATTACAATTTACTAATCCTTCACACGATGTCATCAATTTTCATGGTTTGAACAGCATCATGATAAACACATTCCTAAACTTAATATGGGATGGCATGAATAAGACACAACAGAATTGCCTCCTGAGCTGTTCAGGCATTCCCAAAATTAGAGATGGCATAGTTGATCATGAATTGATGAATCACTGGATGTCTTCTCTTTTTGTGGATGCGGGAGAAACAGAAAAGAACCTAAGACAGCTAGTGGAAAATTCCATCTTTCTTCAATTCGACGGTGTTGGAGGCAGGTATATTTGGTTACCAGAAGAAACCTATCAAATGTTAGAATGGATATACACCTTATACCCATTGTTCATAGAGAAATCGAACCTAGGATTGACTGAACCACCCAACACTGACAAATGGCATAATGCTGTACGAATTGAATTAGCAGGCAATAAAATCTCTGAGCTACCAGAGTCCCCAGATTGTCTGCAACTCAAAGTTTTGATGCTGCATCGCAATGCTGATTTGACAAAAATACCATCTTCATTTTTTTATCACATGCCTCTGCTTTGCATCCTGAACTTATCCTACACTAGTGTAAGAGAACTGCCATGTTCCTTGTTCTTTCTGGAGCAGCTTAGAGAACTATATCTGAAAGGTTGTGAATGCTTCATGAAATTGCCACCTGAAATCGGAAATTTGGAGAAGCTTGAGAAGCTTGATCTTGATGAGACTCAGATCACACATCTGCCAAAAGAGGTCCAGAAGTTGACCAATATTCAAAGCTTGACCCTCTGCTTTTATGAATATCATGTTAAGAAGAACATGCCATATTCCTGCTCAATGATTATTCCTTCTGGCGTGCTATCTAAACTCAACAGGTTGGAACATTTGTGTATTGGTGTAAACCCTGATGATGCGCGGTGGAATAAAAATATGCAAGTCATTCTACCAGAAATATTGGGATTAGAGTGTTTGCAAACTCTCAGCATTTATATCCCACAACTGGAACTTTTGAAGCTCATACCAGCCCGCATTTTTGAACTTGATTTCAGGTTCATTGTTGGTTGTCATATGCAGCGGATTATATCAAGCATACCACCTGCCACTGATGTGGAATTTAAACAAAGTGACTGCAGCTTAAAATTTGTAAAACGTGAGGGTGTCACAGATGAAATCAAAATGCTTCTTAGACACAGCAAAGCTCTTTTCTTGGATCGGCATTTCACCTTAAAGAGTCTAACTGAATTTGAAATGAAAAATTTAGAGCAACTACGTGTGTGCATATTGGCAGAATGCAAAGAAATGCAAACAATTGGTGGAGGAGGTGACTTAGATGATAATATTGATATGCTTCCGCATCTGCTATTCTTAAGTATATTCCAGATGAAGAATCTAAGAAGCATCTGGGAAGGCTCAACTCCTCCTCACTGCTTATTTGGTATGTTGCAGTCTTTGTCATTGCAAAGTTGTCCCAAGTTAACGACTCTCTTCTCTTTGGATTTTCTGGGAAATCTTTCTTTGTTGAAGGAGCTCATGGTGAAAGACTGTCCCAAATTAAGTACACTAATAAGCTATAAGCCTTTTTCTTATACATGTAACCCCAGTGCCGATACTTTCCTCCCTAAATTGAGCAAGTTATGGCTTCTCCATCTTCCTGAATTGACCAGCATTTCGAGTGGGTTGGGCATTGGACCTGGTTTAAAAGAAGTAGGATTTTATGGTTGCCCAAAGATGCGTAATCTTTCAAGGAAGGAATTGGTAAGCAGAGCACTAACTGTAATCAAGGGACAAACAAACTGGTGGAAGGCGCTAGAAGGTCGACCGTCTACATTTGATCAGGTTTTTTCCCCAATCCATGAAGAGGCGGACTTGATGACTCAATTAGGTACGCCATTACAGCACACGGGGTTTGCAACTCCAGCATCAAATTCACCAGCTTCAAGTGGCAAGGGCCTCAAAAACAAGAAGGATCCCAGGTTCTCCAACCTTAGAATATCAATACCTAAACTCCGATCTGCCGTTCTTTCAAATAAATTCTCCAGAGAGATTCGATACAGAGGGATTTTGGAGAGGCCCTGGGGCCGTTACACGTCCCAGGTTTGCGAACCTGGCAAGAACAGCATCTGGCTCGGCACCTTTGACCCTGCTGAAGAGGCCGCAGGTGCCGACGACGCAACAGCACGTGAGTTCCCCGGCCATAAGGCCAAAACCAATTTCCCCAGCCAGAGTAGTATCCTCTACTCCAACACCTTCGATGCCGCCGAGGAATCTGCAAATTCTGCAAATGTTACTCATCCCTATGACAAGGCGACACGTGAGTTCATGAATCTTTACACATCCCTATGA 3393 0.4188 MSKAGATPKTESEGASASQIRTLTSLQSTISSLELINSLRRKRDLMSLLCSYPLDMRVIFDDFISKPYCESKLPLKLEGLLPKEIIRDAENGDRSGSNFIFGDANLDFIPEAILDMAADLAVHQLMETLISICKSKNPKHAKCIRLSTRSDVEKRTVMEKVTAALNDKHHSLDILNSFHGHLTIDATGYPTSEAEKELKQHICQLLQLSTIKYDDILCTLQIEDEMSRSRYLVILVDRDGEEIVDPQKVGLYGTLLTGVLVLITTDSPSSQQAKEGGLKDGLVNLEIRTKEHLLPWVVFCDTAGKEFVYSSDAILTTAVRIVEECRSHLHAILLVAKWLKNHQDVRMWELALHKLQFTNPSHDVINFHGLNSIMINTFLNLIWDGMNKTQQNCLLSCSGIPKIRDGIVDHELMNHWMSSLFVDAGETEKNLRQLVENSIFLQFDGVGGRYIWLPEETYQMLEWIYTLYPLFIEKSNLGLTEPPNTDKWHNAVRIELAGNKISELPESPDCLQLKVLMLHRNADLTKIPSSFFYHMPLLCILNLSYTSVRELPCSLFFLEQLRELYLKGCECFMKLPPEIGNLEKLEKLDLDETQITHLPKEVQKLTNIQSLTLCFYEYHVKKNMPYSCSMIIPSGVLSKLNRLEHLCIGVNPDDARWNKNMQVILPEILGLECLQTLSIYIPQLELLKLIPARIFELDFRFIVGCHMQRIISSIPPATDVEFKQSDCSLKFVKREGVTDEIKMLLRHSKALFLDRHFTLKSLTEFEMKNLEQLRVCILAECKEMQTIGGGGDLDDNIDMLPHLLFLSIFQMKNLRSIWEGSTPPHCLFGMLQSLSLQSCPKLTTLFSLDFLGNLSLLKELMVKDCPKLSTLISYKPFSYTCNPSADTFLPKLSKLWLLHLPELTSISSGLGIGPGLKEVGFYGCPKMRNLSRKELVSRALTVIKGQTNWWKALEGRPSTFDQVFSPIHEEADLMTQLGTPLQHTGFATPASNSPASSGKGLKNKKDPRFSNLRISIPKLRSAVLSNKFSREIRYRGILERPWGRYTSQVCEPGKNSIWLGTFDPAEEAAGADDATAREFPGHKAKTNFPSQSSILYSNTFDAAEESANSANVTHPYDKATREFMNLYTSL 1130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00798 1130 ProSiteProfiles AP2/ERF domain profile. 1033 1089 IPR001471 GO:0003700|GO:0006355
Arst10g00798 1130 SUPERFAMILY DNA-binding domain 1033 1090 IPR016177 GO:0003677
Arst10g00798 1130 Gene3D Ribonuclease Inhibitor 479 699 IPR032675 -
Arst10g00798 1130 Gene3D Ribonuclease Inhibitor 761 941 IPR032675 -
Arst10g00798 1130 Gene3D AP2/ERF domain 1032 1092 IPR036955 GO:0003700|GO:0006355
Arst10g00798 1130 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 142 954 - -
Arst10g00798 1130 SMART rav1_2 1033 1095 IPR001471 GO:0003700|GO:0006355
Arst10g00798 1130 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 174 397 IPR027417 -
Arst10g00798 1130 MobiDBLite consensus disorder prediction 987 1006 - -
Arst10g00798 1130 Pfam Leucine rich repeat 512 569 IPR001611 GO:0005515
Arst10g00798 1130 PRINTS Ethylene responsive element binding protein signature 1055 1071 IPR001471 GO:0003700|GO:0006355
Arst10g00798 1130 PRINTS Ethylene responsive element binding protein signature 1034 1045 IPR001471 GO:0003700|GO:0006355
Arst10g00798 1130 SUPERFAMILY L domain-like 475 928 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00798 Arst-Chr10 6618335 6624619 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00798 1029 1090 AP2-EREBP Transcription Factor Family AT3G15210 61.905 3.49e-21 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00798 - - ahf:112714960 1546.18