Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00797 ATGAGCAAAGCAGGTGATACTGCCAAAGCAGAATCTGAAGGGGCCTCGGCTTCTCAAACTAGTACTTTGACGAGCTTGAAATCAACAATTTCCTCGCAGATACTAAGTTCCAACATGAGCAAAGCAGGTGCTACTCCCAAAACAGAATCTGAAGGGGCCTCGGCTTCTCAGATTAGAACTTTGACGAGCTTGCAATCAACAATTTCCTCACTTGAATTGATAAATAGTTTGAGGAGGAAGAGGGATTTGATGAGCCTCTTGTGTAGTTACCCGCTGGACATGAGAGTGATCTTTGATGATTTCATATCAAAGCCATATTGTGAGAGCAAGCTGCCGCTTAAACTAGAAGGACTTCTTCCAAAGGAGATAATAAGGGATGCTGAAAATGGTGATAGGTCCGGCTCCAACTTCATCTTCGGTGATGCCAACTTGGACTTCATTCCAGAAGCTATTCTCGATATGGCTGCTGATCTTGCTGTCCACCAACTCATGGAAACATTGATTTCCATTTGTAAAAGCAAAAATCCAAAGCATGCAAAATGCATCAGGTTATCAACAAGAAGTGATGTTGAAAAGAGAACAGTCATGGAAAAAGTAACTGCAGCCTTGAATGACAAGCATCATTCACTTGACATTCTTAATTCATTTCATGGACATCTGACTATTGATGCCACCGGATATCCAACTTCAGAAGCAGAGAAGGAACTTAAGCAACATATCTGTCAACTACTTCAGCTTTCAACTATTAAATACGATGACATCTTGTGCACCCTACAGATTGAAGACGAGATGTCAAGAAGCAGGTATCTAGTAATTCTTGTAGATAGGGATGGTGAGGAAATTGTTGATCCACAAAAAGTGGGACTTTATGGTACTCTACTGACAGGAGTTTTGGTACTCATTACCACTGACTCACCATCATCTCAACAGGCTAAAGAAGGAGGATTGAAGGATGGGTTAGTGAACTTGGAAATACGGACAAAAGAACATTTGCTGCCATGGGTGGTCTTCTGTGACACTGCGGGGAAGGAGTTTGTATATTCATCAGATGCCATCCTGACAACTGCAGTGCGCATAGTTGAGGAGTGTCGTAGCCACCTTCATGCAATTCTCCTCGTGGCAAAGTGGTTGAAGAATCATCAAGATGTCAGAATGTGGGAACTTGCTCTCCACAAATTACAATTTACTAATCCTTCACACGATGTCATCAATTTTCATGGTTTGAACAGCATCATGATAAACACATTCCTAAACTTAATATGGGATGGCATGAATAAGACACAACAGAATTGCCTCCTGAGCTGTTCAGGCATTCCCAAAATTAGAGATGGCATAGTTGATCATGAATTGATGAATCACTGGATGTCTTCTCTTTTTGTGGATGCGGGAGAAACAGAAAAGAACCTAAGACAGCTAGTGGAAAATTCCATCTTTCTTCAATTCGACGGTGTTGGAGGCAGGTATATTTGGTTACCAGAAGAAACCTATCAAATGTTAGAATGGATATACACCTTATACCCATTGTTCATAGAGAAATCGAACCTAGGATTGACTGAACCACCCAACACTGACAAATGGCATAATGCTGTACGAATTGAATTAGCAGGCAATAAAATCTCTGAGCTACCAGAGTCCCCAGATTGTCTGCAACTCAAAGTTTTGATGCTGCATCGCAATGCTGATTTGACAAAAATACCATCTTCATTTTTTTATCACATGCCTCTGCTTTGCATCCTGAACTTATCCTACACTAGTGTAAGAGAACTGCCATGTTCCTTGTTCTTTCTGGAGCAGCTTAGAGAACTATATCTGAAAGGTTGTGAATGCTTCATGAAATTGCCACCTGAAATCGGAAATTTGGAGAAGCTTGAGAAGCTTGATCTTGATGAGACTCAGATCACACATCTGCCAAAAGAGGTCCAGAAGTTGACCAATATTCAAAGCTTGACCCTCTGCTTTTATGAATATCATGTTAAGAAGAACATGCCATATTCCTGCTCAATGATTATTCCTTCTGGCGTGCTATCTAAACTCAACAGGTTGGAACATTTGTGTATTGGTGTAAACCCTGATGATGCGCGGTGGAATAAAAATATGCAAGTCATTCTACCAGAAATATTGGGATTAGAGTGTTTGCAAACTCTCAGCATTTATATCCCACAACTGGAACTTTTGAAGCTCATACCAGCCCGCATTTTTGAACTTGATTTCAGGTTCATTGTTGGTTGTCATATGCAGCGGATTATATCAAGCATACCACCTGCCACTGATGTGGAATTTAAACAAAGTGACTGCAGCTTAAAATTTGTAAAACGTGAGGGTGTCACAGATGAAATCAAAATGCTTCTTAGACACAGCAAAGCTCTTTTCTTGGATCGGCATTTCACCTTAAAGAGTCTAACTGAATTTGAAATGAAAAATTTAGAGCAACTACGTGTGTGCATATTGGCAGAATGCAAAGAAATGCAAACAATTGGTGGAGGAGGTGACTTAGATGATAATATTGATATGCTTCCGCATCTGCTATTCTTAAGTATATTCCAGATGAAGAATCTAAGAAGCATCTGGGAAGGCTCAACTCCTCCTCACTGCTTATTTGGTATGTTGCAGTCTTTGTCATTGCAAAGTTGTCCCAAGTTAACGACTCTCTTCTCTTTGGATTTTCTGGGAAATCTTTCTTTGTTGAAGGAGCTCATGGTGAAAGACTGTCCCAAATTAAGTACACTAATAAGCTATAAGCCTTTTTCTTATACATGTAACCCCAGTGCCGATACTTTCCTCCCTAAATTGAGCAAGTTATGGCTTCTCCATCTTCCTGAATTGACCAGCATTTCGAGTGGGTTGGGCATTGGACCTGGTTTAAAAGAAGTAGGATTTTATGGTTGCCCAAAGATGCGTAATCTTTCAAGGAAGGAATTGGTAAGCAGAGCACTAACTGTAATCAAGGGACAAACAAACTGGTGGAAGGCGCTAGAAGGTCGACCGTCTACATTTGATCAGGTTTTTTCCCCAATCCATGAAGAGGCGGACTTGATGACTCAATTAGGTACGCCATTACAGCACACGGGGTTTGCAACTCCAGCATCAAATTCACCAGCTTCAAGTGGCAAGGGCCTCAAAAACAAGAAGGATCCCAGGTTCTCCAACCTTAGAATATCAATACCTAAACTCCGATCTGCCGTTCTTTCAAATAAATTCTCCAGAGAGATTCGATACAGAGGGATTTTGGAGAGGCCCTGGGGCCGTTACACGTCCCAGGTTTGCGAACCTGGCAAGAACAGCATCTGGCTCGGCACCTTTGACCCTGCTGAAGAGGCCGCAGGTGCCGACGACGCAACAGCACGTGAGTTCCCCGGCCATAAGGCCAAAACCAATTTCCCCAGCCAGAGTAGTATCCTCTACTCCAACACCTTCGATGCCGCCGAGGAATCTGCAAATTCTGCAAATGTTACTCATCCCTATGACAAGGCGACACGTGAGTTCATGAATCTTTACACATCCCTATGA 3507 0.4197 MSKAGDTAKAESEGASASQTSTLTSLKSTISSQILSSNMSKAGATPKTESEGASASQIRTLTSLQSTISSLELINSLRRKRDLMSLLCSYPLDMRVIFDDFISKPYCESKLPLKLEGLLPKEIIRDAENGDRSGSNFIFGDANLDFIPEAILDMAADLAVHQLMETLISICKSKNPKHAKCIRLSTRSDVEKRTVMEKVTAALNDKHHSLDILNSFHGHLTIDATGYPTSEAEKELKQHICQLLQLSTIKYDDILCTLQIEDEMSRSRYLVILVDRDGEEIVDPQKVGLYGTLLTGVLVLITTDSPSSQQAKEGGLKDGLVNLEIRTKEHLLPWVVFCDTAGKEFVYSSDAILTTAVRIVEECRSHLHAILLVAKWLKNHQDVRMWELALHKLQFTNPSHDVINFHGLNSIMINTFLNLIWDGMNKTQQNCLLSCSGIPKIRDGIVDHELMNHWMSSLFVDAGETEKNLRQLVENSIFLQFDGVGGRYIWLPEETYQMLEWIYTLYPLFIEKSNLGLTEPPNTDKWHNAVRIELAGNKISELPESPDCLQLKVLMLHRNADLTKIPSSFFYHMPLLCILNLSYTSVRELPCSLFFLEQLRELYLKGCECFMKLPPEIGNLEKLEKLDLDETQITHLPKEVQKLTNIQSLTLCFYEYHVKKNMPYSCSMIIPSGVLSKLNRLEHLCIGVNPDDARWNKNMQVILPEILGLECLQTLSIYIPQLELLKLIPARIFELDFRFIVGCHMQRIISSIPPATDVEFKQSDCSLKFVKREGVTDEIKMLLRHSKALFLDRHFTLKSLTEFEMKNLEQLRVCILAECKEMQTIGGGGDLDDNIDMLPHLLFLSIFQMKNLRSIWEGSTPPHCLFGMLQSLSLQSCPKLTTLFSLDFLGNLSLLKELMVKDCPKLSTLISYKPFSYTCNPSADTFLPKLSKLWLLHLPELTSISSGLGIGPGLKEVGFYGCPKMRNLSRKELVSRALTVIKGQTNWWKALEGRPSTFDQVFSPIHEEADLMTQLGTPLQHTGFATPASNSPASSGKGLKNKKDPRFSNLRISIPKLRSAVLSNKFSREIRYRGILERPWGRYTSQVCEPGKNSIWLGTFDPAEEAAGADDATAREFPGHKAKTNFPSQSSILYSNTFDAAEESANSANVTHPYDKATREFMNLYTSL 1168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00797 1168 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 184 989 - -
Arst10g00797 1168 Gene3D AP2/ERF domain 1070 1130 IPR036955 GO:0003700|GO:0006355
Arst10g00797 1168 MobiDBLite consensus disorder prediction 37 56 - -
Arst10g00797 1168 Pfam Leucine rich repeat 550 607 IPR001611 GO:0005515
Arst10g00797 1168 SUPERFAMILY L domain-like 513 966 - -
Arst10g00797 1168 MobiDBLite consensus disorder prediction 1 22 - -
Arst10g00797 1168 PRINTS Ethylene responsive element binding protein signature 1093 1109 IPR001471 GO:0003700|GO:0006355
Arst10g00797 1168 PRINTS Ethylene responsive element binding protein signature 1072 1083 IPR001471 GO:0003700|GO:0006355
Arst10g00797 1168 SMART rav1_2 1071 1133 IPR001471 GO:0003700|GO:0006355
Arst10g00797 1168 MobiDBLite consensus disorder prediction 1025 1044 - -
Arst10g00797 1168 ProSiteProfiles AP2/ERF domain profile. 1071 1127 IPR001471 GO:0003700|GO:0006355
Arst10g00797 1168 SUPERFAMILY DNA-binding domain 1071 1128 IPR016177 GO:0003677
Arst10g00797 1168 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 212 435 IPR027417 -
Arst10g00797 1168 Gene3D Ribonuclease Inhibitor 517 744 IPR032675 -
Arst10g00797 1168 Gene3D Ribonuclease Inhibitor 747 913 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00797 Arst-Chr10 6618335 6624619 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00797 1067 1128 AP2-EREBP Transcription Factor Family AT3G15210 61.905 4.65e-21 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00797 - - ahf:112714960 1585.08