Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00793 ATGAGCAAAGCAGGTGATACTGCCAAAGCAGAATCTGAAGGGGCCTCGGCTTCTCAAACTAGTACTTTGACGAGCTTGAAATCAACAATTTCCTCGCAGATACTAAGTTCCAACATGAGCAAAGCAGGTGCTACTCCCAAAACAGAATCTGAAGGGGCCTCGGCTTCTCAGATTAGAACTTTGACGAGCTTGCAATCAACAATTTCCTCACTTGAATTGATAAATAGTTTGAGGAGGAAGAGGGATTTGATGAGCCTCTTGTGTAGTTACCCGCTGGACATGAGAGTGATCTTTGATGATTTCATATCAAAGCCATATTGTGAGAGCAAGCTGCCGCTTAAACTAGAAGGACTTCTTCCAAAGGAGATAATAAGGGATGCTGAAAATGGTGATAGGTCCGGCTCCAACTTCATCTTCGGTGATGCCAACTTGGACTTCATTCCAGAAGCTATTCTCGATATGGCTGCTGATCTTGCTGTCCACCAACTCATGGAAACATTGATTTCCATTTGTAAAAGCAAAAATCCAAAGCATGCAAAATGCATCAGGTTATCAACAAGAAGTGATGTTGAAAAGAGAACAGTCATGGAAAAAGTAACTGCAGCCTTGAATGACAAGCATCATTCACTTGACATTCTTAATTCATTTCATGGACATCTGACTATTGATGCCACCGGATATCCAACTTCAGAAGCAGAGAAGGAACTTAAGCAACATATCTGTCAACTACTTCAGCTTTCAACTATTAAATACGATGACATCTTGTGCACCCTACAGATTGAAGACGAGATGTCAAGAAGCAGGTATCTAGTAATTCTTGTAGATAGGGATGGTGAGGAAATTGTTGATCCACAAAAAGTGGGACTTTATGGTACTCTACTGACAGGAGTTTTGGTACTCATTACCACTGACTCACCATCATCTCAACAGGCTAAAGAAGGAGGATTGAAGGATGGGTTAGTGAACTTGGAAATACGGACAAAAGAACATTTGCTGCCATGGGTGGTCTTCTGTGACACTGCGGGGAAGGAGTTTGTATATTCATCAGATGCCATCCTGACAACTGCAGTGCGCATAGTTGAGGAGTGTCGTAGCCACCTTCATGCAATTCTCCTCGTGGCAAAGTGGTTGAAGAATCATCAAGATGTCAGAATGTGGGAACTTGCTCTCCACAAATTACAATTTACTAATCCTTCACACGATGTCATCAATTTTCATGGTTTGAACAGCATCATGATAAACACATTCCTAAACTTAATATGGGATGGCATGAATAAGACACAACAGAATTGCCTCCTGAGCTGTTCAGGCATTCCCAAAATTAGAGATGGCATAGTTGATCATGAATTGATGAATCACTGGATGTCTTCTCTTTTTGTGGATGCGGGAGAAACAGAAAAGAACCTAAGACAGCTAGTGGAAAATTCCATCTTTCTTCAATTCGACGGTGTTGGAGGCAGGTATATTTGGTTACCAGAAGAAACCTATCAAATGTTAGAATGGATATACACCTTATACCCATTGTTCATAGAGAAATCGAACCTAGGATTGACTGAACCACCCAACACTGACAAATGGCATAATGCTGTACGAATTGAATTAGCAGGCAATAAAATCTCTGAGCTACCAGAGTCCCCAGATTGTCTGCAACTCAAAGTTTTGATGCTGCATCGCAATGCTGATTTGACAAAAATACCATCTTCATTTTTTTATCACATGCCTCTGCTTTGCATCCTGAACTTATCCTACACTAGTGTAAGAGAACTGCCATGTTCCTTGTTCTTTCTGGAGCAGCTTAGAGAACTATATCTGAAAGGTTGTGAATGCTTCATGAAATTGCCACCTGAAATCGGAAATTTGGAGAAGCTTGAGAAGCTTGATCTTGATGAGACTCAGATCACACATCTGCCAAAAGAGGTCCAGAAGTTGACCAATATTCAAAGCTTGACCCTCTGCTTTTATGAATATCATGTTAAGAAGAACATGCCATATTCCTGCTCAATGATTATTCCTTCTGGCGTGCTATCTAAACTCAACAGGTTGGAACATTTGTGTATTGGTGTAAACCCTGATGATGCGCGGTGGAATAAAAATATGCAAGTCATTCTACCAGAAATATTGGGATTAGAGTGTTTGCAAACTCTCAGCATTTATATCCCACAACTGGAACTTTTGAAGCTCATACCAGCCCGCATTTTTGAACTTGATTTCAGGTTCATTGTTGGTTGTCATATGCAGCGGATTATATCAAGCATACCACCTGCCACTGATGTGGAATTTAAACAAAGTGACTGCAGCTTAAAATTTGTAAAACGTGAGGGTGTCACAGATGAAATCAAAATGCTTCTTAGACACAGCAAAGCTCTTTTCTTGGATCGGCATTTCACCTTAAAGAGTCTAACTGAATTTGAAATGAAAAATTTAGAGCAACTACGTGTGTGCATATTGGCAGAATGCAAAGAAATGCAAACAATTGGTGGAGGAGGTGACTTAGATGATAATATTGATATGCTTCCGCATCTGCTATTCTTAAGTATATTCCAGATGAAGAATCTAAGAAGCATCTGGGAAGGCTCAACTCCTCCTCACTGCTTATTTGGTATGTTGCAGTCTTTGTCATTGCAAAGTTGTCCCAAGTTGGTGACTCTCTTCTCTTTGGACTTTCTGGGAAATCTTTCTTTGTTGAAGAAACTTATAGTGAAGGACTGCCCCAAATTAAGTACATTGATAAGTCATGAATCATCCAAGCGCAATGCACATGCTTTCCTCCCTAAATTGAGCAAGTTATTGCTTCTCCATCTTCCTGAATTGTCCAGCATTTCAAATGGGTTGCAAATTGGGCCTGGTTTAAAAGAAATAGCATTTTATGACTGTCCAAAGCTGCACAGTCTTTCAAGGAAGGAATTGGTAAGCAAAGAACTAACGGCAATAAAAGGAGAAACCAACTGGTGGAAGTCACTAGAAGGTCGAACGCCTAATTTTAATCTAATTTTTTCCCCAATTAATGAAGAGGCTGACTTGATGACTCAGTTAGGTATATGTGACGATGACGGTATTGATAATGGTCCAGGTGACTCAGTAGGTAAGCCGTCACAGCCTACAGGGATTGCAACTTGTGTATCAAATTCACCGACTAGGAGAGGCAAATATAGAAGGCGTAGAATCTCAAAAACTTGGGAGGTAGAGACAAGTTATCTCACTGAAGATGGATACGCATGGAGAAAATATGGTCAGAAATCGTTGTTCAACAATAAGTACCTGAGACATTATTACAGATGCACTCATAAGTATGATCAAGGATGCCTGGCCACAAAGCATGTTCAACGGATTGGCGAGGACCCTCCTTTATATAAAACAGTTTACTCTGGGCAACATACATGCCGCCGTAGACCGTAG 3396 0.4064 MSKAGDTAKAESEGASASQTSTLTSLKSTISSQILSSNMSKAGATPKTESEGASASQIRTLTSLQSTISSLELINSLRRKRDLMSLLCSYPLDMRVIFDDFISKPYCESKLPLKLEGLLPKEIIRDAENGDRSGSNFIFGDANLDFIPEAILDMAADLAVHQLMETLISICKSKNPKHAKCIRLSTRSDVEKRTVMEKVTAALNDKHHSLDILNSFHGHLTIDATGYPTSEAEKELKQHICQLLQLSTIKYDDILCTLQIEDEMSRSRYLVILVDRDGEEIVDPQKVGLYGTLLTGVLVLITTDSPSSQQAKEGGLKDGLVNLEIRTKEHLLPWVVFCDTAGKEFVYSSDAILTTAVRIVEECRSHLHAILLVAKWLKNHQDVRMWELALHKLQFTNPSHDVINFHGLNSIMINTFLNLIWDGMNKTQQNCLLSCSGIPKIRDGIVDHELMNHWMSSLFVDAGETEKNLRQLVENSIFLQFDGVGGRYIWLPEETYQMLEWIYTLYPLFIEKSNLGLTEPPNTDKWHNAVRIELAGNKISELPESPDCLQLKVLMLHRNADLTKIPSSFFYHMPLLCILNLSYTSVRELPCSLFFLEQLRELYLKGCECFMKLPPEIGNLEKLEKLDLDETQITHLPKEVQKLTNIQSLTLCFYEYHVKKNMPYSCSMIIPSGVLSKLNRLEHLCIGVNPDDARWNKNMQVILPEILGLECLQTLSIYIPQLELLKLIPARIFELDFRFIVGCHMQRIISSIPPATDVEFKQSDCSLKFVKREGVTDEIKMLLRHSKALFLDRHFTLKSLTEFEMKNLEQLRVCILAECKEMQTIGGGGDLDDNIDMLPHLLFLSIFQMKNLRSIWEGSTPPHCLFGMLQSLSLQSCPKLVTLFSLDFLGNLSLLKKLIVKDCPKLSTLISHESSKRNAHAFLPKLSKLLLLHLPELSSISNGLQIGPGLKEIAFYDCPKLHSLSRKELVSKELTAIKGETNWWKSLEGRTPNFNLIFSPINEEADLMTQLGICDDDGIDNGPGDSVGKPSQPTGIATCVSNSPTRRGKYRRRRISKTWEVETSYLTEDGYAWRKYGQKSLFNNKYLRHYYRCTHKYDQGCLATKHVQRIGEDPPLYKTVYSGQHTCRRRP 1131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00793 1131 SMART WRKY_cls 1067 1129 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst10g00793 1131 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 184 965 - -
Arst10g00793 1131 MobiDBLite consensus disorder prediction 37 56 - -
Arst10g00793 1131 MobiDBLite consensus disorder prediction 1 22 - -
Arst10g00793 1131 SUPERFAMILY WRKY DNA-binding domain 1063 1128 IPR036576 GO:0003700|GO:0006355|GO:0043565
Arst10g00793 1131 Gene3D Ribonuclease Inhibitor 783 978 IPR032675 -
Arst10g00793 1131 Pfam Leucine rich repeat 550 607 IPR001611 GO:0005515
Arst10g00793 1131 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 212 435 IPR027417 -
Arst10g00793 1131 ProSiteProfiles WRKY domain profile. 1062 1125 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst10g00793 1131 Gene3D WRKY domain 1055 1130 IPR036576 GO:0003700|GO:0006355|GO:0043565
Arst10g00793 1131 Pfam WRKY DNA -binding domain 1068 1128 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst10g00793 1131 Gene3D Ribonuclease Inhibitor 497 748 IPR032675 -
Arst10g00793 1131 SUPERFAMILY L domain-like 513 965 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00793 Arst-Chr10 6588177 6624616 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00793 997 1127 WRKY Transcription Factor Family AT3G56400 40.000 1.14e-25 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Arst10g00793 WRKY 1.4e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00793 - - aip:107622712 1773.06