Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00792 ATGAGCAAAGCAGGTGATACTGCCAAAGCAGAATCTGAAGGGGCCTCGGCTTCTCAAACTAGTACTTTGACGAGCTTGAAATCAACAATTTCCTCGCAGATACTAAGTTCCAACATGAGCAAAGCAGGTGCTACTCCCAAAACAGAATCTGAAGGGGCCTCGGCTTCTCAGATTAGAACTTTGACGAGCTTGCAATCAACAATTTCCTCACTTGAATTGATAAATAGTTTGAGGAGGAAGAGGGATTTGATGAGCCTCTTGTGTAGTTACCCGCTGGACATGAGAGTGATCTTTGATGATTTCATATCAAAGCCATATTGTGAGAGCAAGCTGCCGCTTAAACTAGAAGGACTTCTTCCAAAGGAGATAATAAGGGATGCTGAAAATGGTGATAGGTCCGGCTCCAACTTCATCTTCGGTGATGCCAACTTGGACTTCATTCCAGAAGCTATTCTCGATATGGCTGCTGATCTTGCTGTCCACCAACTCATGGAAACATTGATTTCCATTTGTAAAAGCAAAAATCCAAAGCATGCAAAATGCATCAGGTTATCAACAAGAAGTGATGTTGAAAAGAGAACAGTCATGGAAAAAGTAACTGCAGCCTTGAATGACAAGCATCATTCACTTGACATTCTTAATTCATTTCATGGACATCTGACTATTGATGCCACCGGATATCCAACTTCAGAAGCAGAGAAGGAACTTAAGCAACATATCTGTCAACTACTTCAGCTTTCAACTATTAAATACGATGACATCTTGTGCACCCTACAGATTGAAGACGAGATGTCAAGAAGCAGGTATCTAGTAATTCTTGTAGATAGGGATGGTGAGGAAATTGTTGATCCACAAAAAGTGGGACTTTATGGTACTCTACTGACAGGAGTTTTGGTACTCATTACCACTGACTCACCATCATCTCAACAGGCTAAAGAAGGAGGATTGAAGGATGGGTTAGTGAACTTGGAAATACGGACAAAAGAACATTTGCTGCCATGGGTGGTCTTCTGTGACACTGCGGGGAAGGAGTTTGTATATTCATCAGATGCCATCCTGACAACTGCAGTGCGCATAGTTGAGGAGTGTCGTAGCCACCTTCATGCAATTCTCCTCGTGGCAAAGTGGTTGAAGAATCATCAAGATGTCAGAATGTGGGAACTTGCTCTCCACAAATTACAATTTACTAATCCTTCACACGATGTCATCAATTTTCATGGTTTGAACAGCATCATGATAAACACATTCCTAAACTTAATATGGGATGGCATGAATAAGACACAACAGAATTGCCTCCTGAGCTGTTCAGGCATTCCCAAAATTAGAGATGGCATAGTTGATCATGAATTGATGAATCACTGGATGTCTTCTCTTTTTGTGGATGCGGGAGAAACAGAAAAGAACCTAAGACAGCTAGTGGAAAATTCCATCTTTCTTCAATTCGACGGTGTTGGAGGCAGGTATATTTGGTTACCAGAAGAAACCTATCAAATGTTAGAATGGATATACACCTTATACCCATTGTTCATAGAGAAATCGAACCTAGGATTGACTGAACCACCCAACACTGACAAATGGCATAATGCTGTACGAATTGAATTAGCAGGCAATAAAATCTCTGAGCTACCAGAGTCCCCAGATTGTCTGCAACTCAAAGTTTTGATGCTGCATCGCAATGCTGATTTGACAAAAATACCATCTTCATTTTTTTATCACATGCCTCTGCTTTGCATCCTGAACTTATCCTACACTAGTGTAAGAGAACTGCCATGTTCCTTGTTCTTTCTGGAGCAGCTTAGAGAACTATATCTGAAAGGTTGTGAATGCTTCATGAAATTGCCACCTGAAATCGGAAATTTGGAGAAGCTTGAGAAGCTTGATCTTGATGAGACTCAGATCACACATCTGCCAAAAGAGGTCCAGAAGTTGACCAATATTCAAAGCTTGACCCTCTGCTTTTATGAATATCATGTTAAGAAGAACATGCCATATTCCTGCTCAATGATTATTCCTTCTGGCGTGCTATCTAAACTCAACAGGTTGGAACATTTGTGTATTGGTGTAAACCCTGATGATGCGCGGTGGAATAAAAATATGCAAGTCATTCTACCAGAAATATTGGGATTAGAGTGTTTGCAAACTCTCAGCATTTATATCCCACAACTGGAACTTTTGAAGCTCATACCAGCCCGCATTTTTGAACTTGATTTCAGGTTCATTGTTGGTCGTCATATGCAGCGGATTATATCAAGCATACCACCTGCCACTGATGTGAAATTTAAACAAAGTGACTGCAGCTTAAAATTTGTAAAAGGTGAGGGTGTGCCAGATGAAATCAAAACGGTTCTTAGACACAGCAAGGCTCTTTTCTTGGATAGGCATTTCACCTTGAAGAGTCTTTCTGAATTTGAAATGAAAAATTTAGACCAACTAAGGGTGTGCATATTGGCAGAATGCAAAGAAATGCAGACATGTGGAGGTGGAGCAAAAGATGAAGATGACATGCTTCCGCATTTGCTATTCTTGAGTATATTCCACATGAAGAATCTGAGAAGCATATGGGAAGGCCCAACTTCCCCTCACTCCTCATTTGGTATGTTACAGTCTTTGTCTTTGCAAAGTTGTCCCAGGTTGGTGACTCTCTTCTCTTTGGACTTTCTGGGAAATCTTTCTTTGTTGAAGAAACTTATAGTGAAGGACTGCCCCAAATTAAGTACATTGATAAGTCATGAATCATCCAAGCGCAATGCACATGCTTTCCTCCCTAAATTGAGCAAGTTATTGCTTCTCCATCTTCCTGAATTGTCCAGCATTTCAAATGGGTTGCAAATTGGGCCTGGTTTAAAAGAAATAGCATTTTATGACTGTCCAAAGCTGCACAGTCTTTCAAGGAAGGAATTGGTAAGCAAAGAACTAACGGCAATAAAAGGAGAAACCAACTGGTGGAAGTCACTAGAAGGTCGAACGCCTAATTTTAATCTAATTTTTTCCCCAATTAATGAAGAGGCTGACTTGATGACTCAGTTAGGTATATGTGACGATGACGGTATTGATAATGGTCCAGGTGACTCAGTAGGTAAGCCGTCACAGCCTACAGGGATTGCAACTTGTGTATCAAATTCACCGACTAGGAGAGGCAAATATAGAAGGCGTAGAATCTCAAAAACTTGGGAGGTAGAGACAAGTTATCTCACTGAAGATGGATACGCATGGAGAAAATATGGTCAGAAATCGTTGTTCAACAATAAGTACCTGAGACATTATTACAGATGCACTCATAAGTATGATCAAGGATGCCTGGCCACAAAGCATGTTCAACGGATTGGCGAGGACCCTCCTTTATATAAAACAGTTTACTCTGGGCAACATACATGCCGCCGTAGACCGTAG 3390 0.4091 MSKAGDTAKAESEGASASQTSTLTSLKSTISSQILSSNMSKAGATPKTESEGASASQIRTLTSLQSTISSLELINSLRRKRDLMSLLCSYPLDMRVIFDDFISKPYCESKLPLKLEGLLPKEIIRDAENGDRSGSNFIFGDANLDFIPEAILDMAADLAVHQLMETLISICKSKNPKHAKCIRLSTRSDVEKRTVMEKVTAALNDKHHSLDILNSFHGHLTIDATGYPTSEAEKELKQHICQLLQLSTIKYDDILCTLQIEDEMSRSRYLVILVDRDGEEIVDPQKVGLYGTLLTGVLVLITTDSPSSQQAKEGGLKDGLVNLEIRTKEHLLPWVVFCDTAGKEFVYSSDAILTTAVRIVEECRSHLHAILLVAKWLKNHQDVRMWELALHKLQFTNPSHDVINFHGLNSIMINTFLNLIWDGMNKTQQNCLLSCSGIPKIRDGIVDHELMNHWMSSLFVDAGETEKNLRQLVENSIFLQFDGVGGRYIWLPEETYQMLEWIYTLYPLFIEKSNLGLTEPPNTDKWHNAVRIELAGNKISELPESPDCLQLKVLMLHRNADLTKIPSSFFYHMPLLCILNLSYTSVRELPCSLFFLEQLRELYLKGCECFMKLPPEIGNLEKLEKLDLDETQITHLPKEVQKLTNIQSLTLCFYEYHVKKNMPYSCSMIIPSGVLSKLNRLEHLCIGVNPDDARWNKNMQVILPEILGLECLQTLSIYIPQLELLKLIPARIFELDFRFIVGRHMQRIISSIPPATDVKFKQSDCSLKFVKGEGVPDEIKTVLRHSKALFLDRHFTLKSLSEFEMKNLDQLRVCILAECKEMQTCGGGAKDEDDMLPHLLFLSIFHMKNLRSIWEGPTSPHSSFGMLQSLSLQSCPRLVTLFSLDFLGNLSLLKKLIVKDCPKLSTLISHESSKRNAHAFLPKLSKLLLLHLPELSSISNGLQIGPGLKEIAFYDCPKLHSLSRKELVSKELTAIKGETNWWKSLEGRTPNFNLIFSPINEEADLMTQLGICDDDGIDNGPGDSVGKPSQPTGIATCVSNSPTRRGKYRRRRISKTWEVETSYLTEDGYAWRKYGQKSLFNNKYLRHYYRCTHKYDQGCLATKHVQRIGEDPPLYKTVYSGQHTCRRRP 1129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00792 1129 SUPERFAMILY WRKY DNA-binding domain 1061 1126 IPR036576 GO:0003700|GO:0006355|GO:0043565
Arst10g00792 1129 Gene3D WRKY domain 1053 1128 IPR036576 GO:0003700|GO:0006355|GO:0043565
Arst10g00792 1129 MobiDBLite consensus disorder prediction 37 56 - -
Arst10g00792 1129 MobiDBLite consensus disorder prediction 1 22 - -
Arst10g00792 1129 SUPERFAMILY L domain-like 513 963 - -
Arst10g00792 1129 Gene3D Ribonuclease Inhibitor 495 738 IPR032675 -
Arst10g00792 1129 SMART WRKY_cls 1065 1127 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst10g00792 1129 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 212 435 IPR027417 -
Arst10g00792 1129 Gene3D Ribonuclease Inhibitor 773 976 IPR032675 -
Arst10g00792 1129 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 184 975 - -
Arst10g00792 1129 ProSiteProfiles WRKY domain profile. 1060 1123 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst10g00792 1129 Pfam WRKY DNA -binding domain 1066 1126 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst10g00792 1129 Pfam Leucine rich repeat 550 607 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00792 Arst-Chr10 6588177 6624616 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00792 995 1125 WRKY Transcription Factor Family AT3G56400 40.000 1.04e-25 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Arst10g00792 WRKY 1.4e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00792 - - aip:107622712 1818.13