Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00775 ATGTCCTTAACAGGGCGTCCTCGAGTGATCGTGAATGGAGTCCGAAGAACAAGAAGTTTCCACTGTTTCTGGTGCCTTAACTGCCAACGAACAGTGAGAATACCTGCTACCTATCCAAACGGTTCTCTCTGCCCTTATTGCTTCAATAGACTCCGTTACGAGCTTGACATAACAAGGCCAACAAGGTTTCTCTTCACCAACAACAACAATTTGGAACCTTCACCAGCTTCTCAGCTATTGAATGGCCTCGCTCTCATTCTCCATCCACCTCAACACAATCATAACCGATGGGAAGGAGAAGAAGAACAAACACTAGAAAATCAACAAGATCCACGAGCTTGGATTACTCTCAGATTCGTGAGGCCAAATAACAACGGTCCACAGAGACTTATGCCTCCACCGCTGCAGCCGCAACCGCAAGCCAACAATAACAGCGATCCGATTGATCAATTCATTCAAAATTTGGTCGAGAATAATAACAACCGGCCGGGCCCGCCTCCGGCTTCGTCTTCGGCCATCGCAGCGTTGCCGGTGGTGAGGCTGGCGCGAGAACAATTGGCTAGTGATCCGAACTGTGCAATATGCAAAGATGAATTTGAGGTAGATGGAGAAGTGAGGGAGTTGCCGTGCAAGCATTTCTACCATTGCGATTGCATTCTGCCATGGCTGCGCATCCATAATACCTGCCCTGTCTGCCGCTATGAGCTTCCTCCTGTTGCGGCGAGTGAGAATCAGAATAATAATCATAATCATAATATTAATAATAATGAGCAGCAGAGTTTTATTAGCTTCAACTGGATTTTGAGACAAATTGCTTCGATCAGTAGCCCCCTTCGTGCTATCTTGGATTATTGGACTCACAGACATTACTCTAATCACCAAGATAACAATGCTCCTGCTCATGATGATGGAGGTACTATTAGCTCTTGGTGGAGAGAATTGTTCATCTTATAG 954 0.4602 MSLTGRPRVIVNGVRRTRSFHCFWCLNCQRTVRIPATYPNGSLCPYCFNRLRYELDITRPTRFLFTNNNNLEPSPASQLLNGLALILHPPQHNHNRWEGEEEQTLENQQDPRAWITLRFVRPNNNGPQRLMPPPLQPQPQANNNSDPIDQFIQNLVENNNNRPGPPPASSSAIAALPVVRLAREQLASDPNCAICKDEFEVDGEVRELPCKHFYHCDCILPWLRIHNTCPVCRYELPPVAASENQNNNHNHNINNNEQQSFISFNWILRQIASISSPLRAILDYWTHRHYSNHQDNNAPAHDDGGTISSWWRELFIL 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00775 317 ProSiteProfiles Zinc finger RING-type profile. 192 233 IPR001841 -
Arst10g00775 317 SUPERFAMILY RING/U-box 173 244 - -
Arst10g00775 317 MobiDBLite consensus disorder prediction 125 147 - -
Arst10g00775 317 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 154 240 IPR013083 -
Arst10g00775 317 FunFam E3 ubiquitin-protein ligase RING1-like 154 239 - -
Arst10g00775 317 CDD RING-H2_RNF126-like 191 233 - -
Arst10g00775 317 SMART ring_2 192 232 IPR001841 -
Arst10g00775 317 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 97 237 - -
Arst10g00775 317 Pfam Ring finger domain 191 233 IPR001841 -
Arst10g00775 317 Coils Coil 239 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00775 Arst-Chr10 6527599 6529071 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00775 1 287 C3H Transcription Factor Family AT1G68180 32.759 1.20e-42 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00775 K11982 - gmx:100793656 294.664