Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00728 ATGGGAGATAACAATGTGAACCTTCCACCGGGGTTTCGATTTTATCCAACAGATGAAGAGCTTGTGGTCCATTTTCTTCATAGAAAGGCAGCACTCTTACCTTGCCACCCTGATGTCATCCCTGATCTTGATCTCTATCCTTATGATCCTTGGGAACTTGATGGTAGAGCGTTAGCAGAGGGAAATCAATGGTACTACTACAGCAGGAGAACACAGAGTAGGGTGACTGAGAATGGATATTGGAAAGCAACAGGAATGGAAGAACCAGTGATGACAAGCTCAACCAACAAGAGAGTTGGCATCAAGAAATACTTTGTGTTTCATCTTGGTGAATCCCCTTCTGCTATCAAAACAAATTGGATAATGCAAGAATATTGCCTTTCCGATTATTCTGCTTCCTCTAGCAGATCCTCCAAAAGAAAATCAGATTATAGTAAATGGGTGATATGTCGTGTTTATGAGCGCAATGGAGATGATGATGATGGAACGGAGCTCTCTTGTTTGGATGAAGTTTTCTTGTCACTCGATGATCTTGATGAAATAAGCTTACCAAATTAA 558 0.4104 MGDNNVNLPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLDLYPYDPWELDGRALAEGNQWYYYSRRTQSRVTENGYWKATGMEEPVMTSSTNKRVGIKKYFVFHLGESPSAIKTNWIMQEYCLSDYSASSSRSSKRKSDYSKWVICRVYERNGDDDDGTELSCLDEVFLSLDDLDEISLPN 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00728 185 PANTHER NAC TRANSCRIPTION FACTOR 56 8 159 - -
Arst10g00728 185 FunFam NAC domain-containing protein 104 17 158 - -
Arst10g00728 185 Pfam No apical meristem (NAM) protein 9 127 IPR003441 GO:0003677|GO:0006355
Arst10g00728 185 Gene3D NAC domain 17 159 IPR036093 GO:0003677|GO:0006355
Arst10g00728 185 SUPERFAMILY NAC domain 5 154 IPR036093 GO:0003677|GO:0006355
Arst10g00728 185 ProSiteProfiles NAC domain profile. 8 155 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00728 Arst-Chr10 6055327 6056913 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00728 1 170 NAC Transcription Factor Family AT1G61110 41.053 1.16e-44 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Arst10g00728 NAM 4e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00728 - - gmx:100170712 329.331
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g05587 3 130004406 130005834 Arst10g00728 10 6055327 6056913 PCT