Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00708 ATGGACGTGTTATCGATGAGCAGTTTAAAAACACTACCTAACCAGTGGTGTGGAGTCCCAGAGCGAAAAAGAGGGGTGGTTTCATGCAGAGCGACAACGGTAGCAAATAGCAACACTAACTTGTACAAGGTGCTGTCACTGAGTCCCAAGAGTGCAACAATGGATGACATCAAGAGAGCATACAGATCAATGGCTCTAAGGTACCACCCTGACGTCTGCCATGACCCTTCCAAGAAAGATGAATCCACAAGGCTCTTCGTGCAGCTCAATCAAGCCTATGAGACTTTGTCTAATCCCACCCTCAGACAAGAGTACGATCATCAATTAGGCTTGATAACCGCTCATGATGAAAGCTCCAGAAAGAGGTGGAAGGAGCAACTTGCTGAGTTGAAGACAAGGTCCCACAGAAAACAGGGATCATGGGGTAGTAGAATGAGGGCCCAAAACATTATCATCATGATGAACAATCACAACTAG 477 0.4612 MDVLSMSSLKTLPNQWCGVPERKRGVVSCRATTVANSNTNLYKVLSLSPKSATMDDIKRAYRSMALRYHPDVCHDPSKKDESTRLFVQLNQAYETLSNPTLRQEYDHQLGLITAHDESSRKRWKEQLAELKTRSHRKQGSWGSRMRAQNIIIMMNNHN 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00708 158 Pfam DnaJ domain 40 106 IPR001623 -
Arst10g00708 158 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 30 149 - -
Arst10g00708 158 SUPERFAMILY Chaperone J-domain 28 109 IPR036869 -
Arst10g00708 158 PRINTS DnaJ domain signature 61 76 IPR001623 -
Arst10g00708 158 PRINTS DnaJ domain signature 81 101 IPR001623 -
Arst10g00708 158 PRINTS DnaJ domain signature 43 61 IPR001623 -
Arst10g00708 158 ProSiteProfiles dnaJ domain profile. 40 109 IPR001623 -
Arst10g00708 158 CDD DnaJ 40 98 IPR001623 -
Arst10g00708 158 ProSitePatterns Nt-dnaJ domain signature. 86 105 IPR018253 -
Arst10g00708 158 Gene3D DnaJ domain 27 139 IPR036869 -
Arst10g00708 158 SMART dnaj_3 39 101 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00708 Arst-Chr10 5879968 5880753 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00708 42 116 C2H2 Transcription Factor Family AT1G74250 37.662 8.76e-07 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00708 - - gmx:100783590 163.31