Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00689 ATGTCTCACTTTGGAAGGTCAGGTCCACCAGACATTAGCGACACATACTCCCTTCTCGTTCTCAACATCACCTTCCGTACAACCGCCGACGACCTCTTCCCTCTCTTCCACAAGTACGGCGACGTCGTCGACATTTTCATTCCCAAGGACCGCCGCACCGGCGACTCCAGGGGCTTCGCATTTGTTCGCTACAAGTATGCCGACGAGGCTCAAAAGGCTGTCGAGCGCCTCGACGGCAGGGTCGTCGACGGCCGCGAAATCACCGTCCAGTTCGCCAAGTACGGTCCCAACGCCGAGCGCATCCACAAAGGTAGGATTGTCGAATCTGCTCCCAGATCTAAGCGCAGCCGCAGTCCCAGGAGAAGGTATCGTGATGATGATTACAGAGAGAAGGATTATAGGAGGAGGAGTCGCAGCAGGAGTTACGATAGGTATGAGCGTGACAGGCACCGTGGCAGGGACAGGGATTATCGTCGCCGGAGCCGGAGTCGGAGTGCCAGTCCGGACAAGGGTCGTGGAAGGGGACGCTATGATGATGATGACCGCCCTATCCGTAGTATAAGCCGTAGCCG 572 0.5717 MSHFGRSGPPDISDTYSLLVLNITFRTTADDLFPLFHKYGDVVDIFIPKDRRTGDSRGFAFVRYKYADEAQKAVERLDGRVVDGREITVQFAKYGPNAERIHKGRIVESAPRSKRSRSPRRRYRDDDYREKDYRRRSRSRSYDRYERDRHRGRDRDYRRRSRSRSASPDKGRGRGRYDDDDRPIRSISRSRSRSRSRSRSRSGSRSRSVDSRSPARRSPSPQRSPSPRTSASPRKKSPRGESPRTRNGHSPTPVSPRGRPDASRSPSPRNSDGDA 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00689 275 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN RZ1A 14 237 - -
Arst10g00689 275 SMART rrm1_1 17 90 IPR000504 GO:0003723
Arst10g00689 275 MobiDBLite consensus disorder prediction 102 275 - -
Arst10g00689 275 FunFam Serine/arginine-rich splicing factor SC35 4 103 - -
Arst10g00689 275 SUPERFAMILY RNA-binding domain, RBD 8 101 IPR035979 GO:0003676
Arst10g00689 275 Gene3D - 4 103 IPR012677 -
Arst10g00689 275 SMART rrm2_1 17 90 IPR003954 GO:0003676
Arst10g00689 275 MobiDBLite consensus disorder prediction 102 188 - -
Arst10g00689 275 CDD RRM_SRSF2_SRSF8 18 90 - -
Arst10g00689 275 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 16 94 IPR000504 GO:0003723
Arst10g00689 275 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 18 88 IPR000504 GO:0003723
Arst10g00689 275 MobiDBLite consensus disorder prediction 213 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00689 Arst-Chr10 5744713 5745567 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00689 13 92 Eukaryotic Initiation Factors Gene Family AT3G11400 36.250 1.11e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00689 K12891 - gmx:100778928 263.462