Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00681 GATCGAGGACAGTCTTCAATTTCTGGAGATTATATCCCAGTTGTTCCGGGTGAAAGATTTGGAGGAAGTGATACTACTTATATTGATGGTCAGAAAGCACATAGCATGGCATCCTGGGACACTGTGTTGAAGCAATGCAATGCAGAATTGCAGAGTGATCCTTCGTTTGTACCATTTTCTTCCATACCATCGAGTTTGATAGGAAACACTGTAGAACAAGAACGTAATGACTTTGGTGATCTCTTAGGGAGCAAAAGTAGCCTCACTGAGGAGGCAGGGAGCTCGCAATCTATCCAATCAAACTGGCAGATTCCTTTTGAAGAAAGTTCAGGACGCTTGCCAAACTTCACCCAATCATTGAGTTTGGAATTTGGATCCGATTATATATCTGGTTTAGTTGGGAATGAAACACTTAATGCAAGTTCTGAAATTGATCCTCACCTGTTTAACTTTCATGGTGAGCCGAAAGAGCAGCATGTGCAACAACACTATCCAGAACGGCATGCAGATGGACAATCTCAGTATGCACTTCAATCCAATTCTCTGAATAAAGTTCTTGGTGAAGAAAGTCTCAACCATGCTTTCACAGCAAAGCGCACATTATTGGATGGAGACGAGAGCCTGAAAAAAGTTGATAGCTTCTCTAGGTGGATTACTAAAACCCTTGGAGAGGTGGATGATTTGAATATGCAGTCTTCAGCTGGTATTTCATGGGGTACAGATGAATCTGGGCATGTGATAGATGATTCCTCATTGAGCCCGTCCCTTTCTCAGGATCAGCTGTTTAGCATAAATGAATTTTCCCCCAAATGGGCTTATGCTGAAGTGGAAACTGAGGTGGTAATTGTTGGATCTTTTTTGAAGTATCAACCGGAGGTGTCAACCTCTAACTGGTCCTGTATGTTTGGGGAAGTGGAGGTCCCTGCTGAGGTTTTAACTAATGGAATTCTGTGTTGCCAGGCTCCACCTCATAAGGTTGGACGGGTTCCTTTCTATGTAACATGTTCAAATAGATTAGCTTGCAGTGAAGTGCGTGAATTCGACTATAGAGAAGGCTTTTCTGGAAATGTAGAATTTGCAGATTTTTATAACGATTCAACTGAAAGGCTGCTGCATTTGCGATTGGAAGAGTTTCTGTCCTCAAAACCAGTGTGCCCATCTAAACAAACCTTTGAGAATGATATGGAGAAAAGAGATGTAATTTTAAAGCTTATTTTCTTAAGAGAGGAAGAGGAATTCTCGAGTAAGGAAGAGCAACATGTAGAATCTGATACATCCTCACAGAAGGTGAAGGCGCATCTGTTTCACAGGCAGATTAAAGAGAAGCTGTACTCATGGCTTCTGCACAAAGTAACGGAAAGTGATAAAGGTCCTAATGTGTTAGATAAGGATGGACAGGGTGTTTTACATTTAGCAGCTGCTCTTGGGTATGATTGGGCTATACAACCAATTTTAACTGCTGGAGGTGGTATCAATTTCCGTGATGTAAATGGATGGACAGCCCTACATTGGGCTGCATCCTGTGGCAGAGAGCGGACGGTGGTTGTCCTTGTCACCATGGGTGCAAATTCTGGAGCATTGACAGATCCATCTCCAGCATTTCCAACCGGAAGAACAGCTTCAGAGCTTGCCTCTACCAATGGGCACAAAGGAATATCTGGTTTCCTTGGTGAATCTTTATTAACCAGTCATCTTGAATCCCTCACAATGGATGATCAATATAAAGGTGGCAGGCAAGAGATTTCAGTAACAAAAGTAGTGCAGACAGTTTCAGAACGAACTGCTACCCCTGTGTTATATGGGGATGATATGCCAGATGATCCCTGCCTTAAGGATTCCCTTACTGCTGTTATTAATGCTACACAAGCTGCAGATCGTATACATCAGGTATTCAGAATGCAGTCTTTTCAGAGGACCAAATCTGGACAAGGAGATCGTTTAGCCAATGCTGCTGCAACACAGATACAGAAGAAGTTTCGTGGGTGGAAGAAGAGAAAAGAATTCTTGATCATTCGTCAAAGAATTGTTAAAATCCAGGCCCATGTAAGAGGTCACCAGGTTAGGAAGAGTCTAAAAAGCATAATCTGGTCTGTGGGAATCCTTGAGAAAGTGATATTACGGTGGAGACGCAAGGGCAGTGGCTTGCGCGGATTTAAACCCGATGCCCTTAATAAGGCCCCCATTCAACAGAGTGATCCGCCGAAAGAAGATGATTATGATTTCCTCAAGGAAGGAAGAAAACAAAGTGAGGAGAAGTTCCAAAAGGCCCTTTCAAGGGTCAAGTCCATGGTTCAATATCCAGAGGCACGTGCTCAATACCGGCGCCTGCTAAATGTTGTTGACGACTTCCGTCAAACCAAGGCATGTAATATGGATTTAGTAAATTCTGAAGAGACAGTTGATGGTGTGGAGGATTTGATTGATATTGATATGCTCTTAGATGATGACAATTTTATTCCCATAGCATTTGATTGA 2475 0.4263 MLEPDMMHIVFVHYLEVKGNKTNTGGNIDSYDVSSDSQRTPSPSSGLPTNYSNLPSLSTDSMSPASSLASLREDADSEEIHQASSRLHTLNESQHTRNGHLTDKVDTGDRGQSSISGDYIPVVPGERFGGSDTTYIDGQKAHSMASWDTVLKQCNAELQSDPSFVPFSSIPSSLIGNTVEQERNDFGDLLGSKSSLTEEAGSSQSIQSNWQIPFEESSGRLPNFTQSLSLEFGSDYISGLVGNETLNASSEIDPHLFNFHGEPKEQHVQQHYPERHADGQSQYALQSNSLNKVLGEESLNHAFTAKRTLLDGDESLKKVDSFSRWITKTLGEVDDLNMQSSAGISWGTDESGHVIDDSSLSPSLSQDQLFSINEFSPKWAYAEVETEVVIVGSFLKYQPEVSTSNWSCMFGEVEVPAEVLTNGILCCQAPPHKVGRVPFYVTCSNRLACSEVREFDYREGFSGNVEFADFYNDSTERLLHLRLEEFLSSKPVCPSKQTFENDMEKRDVILKLIFLREEEEFSSKEEQHVESDTSSQKVKAHLFHRQIKEKLYSWLLHKVTESDKGPNVLDKDGQGVLHLAAALGYDWAIQPILTAGGGINFRDVNGWTALHWAASCGRERTVVVLVTMGANSGALTDPSPAFPTGRTASELASTNGHKGISGFLGESLLTSHLESLTMDDQYKGGRQEISVTKVVQTVSERTATPVLYGDDMPDDPCLKDSLTAVINATQAADRIHQVFRMQSFQRKXKSGQGDRLANAAATQIQKKFRGWKKRKEFLIIRQRIVKIQAHVRGHQVRKSLKSIIWSVGILEKVILRWRRKGSGLRGFKPDALNKAPIQQSDPPKEDDYDFLKEGRKQSEEKFQKALSRVKSMVQYPEARAQYRRLLNVVDDFRQTKACNMDLVNSEETVDGVEDLIDIDMLLDDDNFIPIAFD 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00681 933 Gene3D - 532 667 IPR036770 -
Arst10g00681 933 ProSiteProfiles Ankyrin repeat profile. 605 637 IPR002110 GO:0005515
Arst10g00681 933 FunFam Calmodulin-binding transcription activator 2 756 804 - -
Arst10g00681 933 MobiDBLite consensus disorder prediction 21 121 - -
Arst10g00681 933 Gene3D - 755 803 - -
Arst10g00681 933 MobiDBLite consensus disorder prediction 828 848 - -
Arst10g00681 933 Pfam Ankyrin repeats (3 copies) 553 631 IPR002110 GO:0005515
Arst10g00681 933 Pfam IPT/TIG domain 372 450 IPR002909 -
Arst10g00681 933 SUPERFAMILY E set domains 372 458 IPR014756 -
Arst10g00681 933 SMART ANK_2a 605 634 IPR002110 GO:0005515
Arst10g00681 933 SMART ANK_2a 572 601 IPR002110 GO:0005515
Arst10g00681 933 SMART iq_5 779 801 IPR000048 GO:0005515
Arst10g00681 933 SMART iq_5 756 778 IPR000048 GO:0005515
Arst10g00681 933 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 737 807 IPR027417 -
Arst10g00681 933 Gene3D Immunoglobulins 365 460 IPR013783 -
Arst10g00681 933 ProSiteProfiles Ankyrin repeat region circular profile. 605 631 - -
Arst10g00681 933 FunFam Calmodulin-binding transcription activator 2 365 461 - -
Arst10g00681 933 ProSiteProfiles Ankyrin repeat profile. 572 604 IPR002110 GO:0005515
Arst10g00681 933 ProSiteProfiles IQ motif profile. 780 804 IPR000048 GO:0005515
Arst10g00681 933 ProSiteProfiles IQ motif profile. 757 786 IPR000048 GO:0005515
Arst10g00681 933 SUPERFAMILY Ankyrin repeat 562 664 IPR036770 -
Arst10g00681 933 Pfam IQ calmodulin-binding motif 782 801 IPR000048 GO:0005515
Arst10g00681 933 Pfam IQ calmodulin-binding motif 759 777 IPR000048 GO:0005515
Arst10g00681 933 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 1 895 - -
Arst10g00681 933 ProSiteProfiles CG-1 DNA-binding domain profile. 1 23 IPR005559 GO:0003677
Arst10g00681 933 MobiDBLite consensus disorder prediction 21 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00681 Arst-Chr10 5685248 5689938 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00681 1 914 CAMTA Transcription Factor Family AT5G64220 47.113 0.0 788
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00681 K21596 - gmx:100818124 1310.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g05536 3 129710550 129718254 Arst10g00681 10 5685248 5689938 PCT