Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00680 ATGGATAATCTCTGTTGCTTCAATTCTGTCTCTCAGGTGGTTGGAGGTCGTTCTTCATGTAGCTCCGGCAAGGGTAGGAGCTCTCAGTATGCAGTCAAGTATGGCTTCAGTCTAGTTAAAGGGAAAGCGAATCACCCAATGGAGGACTATCACGTGGCGAAATTTGTCCAGTCGAGAGGGCAAGAGCTAGGACTTTTCGCTATCTATGACGGACACTTGGGAGACACTGTTCCAGCATATCTACAAAAGCATCTGCTTTCTAATATCTTGAAGGAAGCAGACTTCTGGAATGATCCAAACAGTTCCATCATTAAGGCGTACGAGACAACGGATCAGGCCATTCTTTCTCACAATCCTGATCTGGGACGAGGCGGATCAACTGCAGTGACTGCAATTCTAATAAATAATCAGCAATTGTGGATAGCGAATGTTGGAGATTCACGAGCAGTTCTGTCACGGGGAGGGCAGGCCATACAGATGACGGTAGATCATGAGCCCAATACTGAAAGGGGCATAATCGAGAACAAAGGCGGATTTGTCTCAAACATGCCAGGAGATGTTGCAAGAGTGAACGGGCAGCTTGCAGTGTCTCGGGCATTCGGAGACAGAAACCTCAAATCGCACTTGCGATCTGATCCTGATGTACAACATTGTGACATTGAACAAGATACTGAGCTTTTGATTCTGGCTAGTGATGGTCTTTGGAAGGTAATGGCAAACCAAGAAGCAGTGGATATTGCGAAAAGGATCAAAGATCCTCAAAAGGCGGCGAAACAGCTAGCTGCGGAGGCATTGAACAGAGACAGTAAAGATGACATTTCATGCATTGTAGTTCGTTTCAAGTGA 846 0.461 MDNLCCFNSVSQVVGGRSSCSSGKGRSSQYAVKYGFSLVKGKANHPMEDYHVAKFVQSRGQELGLFAIYDGHLGDTVPAYLQKHLLSNILKEADFWNDPNSSIIKAYETTDQAILSHNPDLGRGGSTAVTAILINNQQLWIANVGDSRAVLSRGGQAIQMTVDHEPNTERGIIENKGGFVSNMPGDVARVNGQLAVSRAFGDRNLKSHLRSDPDVQHCDIEQDTELLILASDGLWKVMANQEAVDIAKRIKDPQKAAKQLAAEALNRDSKDDISCIVVRFK 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00680 281 CDD PP2Cc 32 280 IPR001932 -
Arst10g00680 281 SMART PP2C_4 25 278 IPR001932 -
Arst10g00680 281 Gene3D - 28 281 IPR036457 -
Arst10g00680 281 ProSiteProfiles PPM-type phosphatase domain profile. 33 280 IPR001932 -
Arst10g00680 281 PANTHER PROTEIN PHOSPHATASE 28 280 IPR015655 GO:0004722|GO:0006470
Arst10g00680 281 SMART PP2C_SIG_2 44 280 IPR001932 -
Arst10g00680 281 Pfam Protein phosphatase 2C 42 273 IPR001932 -
Arst10g00680 281 SUPERFAMILY PP2C-like 27 281 IPR036457 -
Arst10g00680 281 FunFam Probable protein phosphatase 2C 39 23 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00680 Arst-Chr10 5679095 5682652 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00680 1 281 PP2C-type Phosphatase Gene Family AT1G22280 69.686 1.34e-146 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00680 K17506 - gmx:100801722 464.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g05534 3 129694614 129698747 Arst10g00680 10 5679095 5682652 PCT