Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00661 ATGGAGGTGCAGTTGCAGAGCGATCCATGGGAGTGGGAGAAGCCAATGGCCACTTATCTGCTTCGCTACCACTCCGACCAGCTCCGATCCATCGCTTCCTCTCCCGATCCCAATCTTCACTATCCTCTCTTCATTGACTTCGCAGAGTTGATGGAGGAACATCCTCACCTTGCGCGTCTCATATTCTCCCAACCCACCCCTTACTTGCAAGCCTTCGACAATGCTGCTCTCTTGTCTCACAGAATCGTGGTGAGAGATTTAGAGCAAGAGAAGAATGTTGTTGAGAAGAATTTCATTCATGTTCGAATCAACATCAGTGGTTCTCCCCTTGAATGCTCTGAGACGTTTCCGACCATAGGGCGTGTTCGAGTGCAGCATCGCGGAATTCTTCTCACTGTGAAAGGGACTGTAATCAGGTCTGGGGCAATCAAGATGCATGAAGGAGAGAGGAAGTATATGTGCAACAAATGCAAGAAGAGCTTCACAGTTTATCCTGAGGTTGAAGCTCGAAACTCCATATCATTACCTTCAATTTGCCCCATGCAGAAATTGAAGCCCTGTGGAGGCACAAACTTCCAGTATGTAGAAAATACTATAGTATGCCATGATTATCAGGAGATAAAAATCCAAGAAAGTACACAGGTGCTAGGTGTTGGGGCCATTCCTCGTTCAATTCTTGTCATCTTGCATGATGATCTGGTTGATGTTGTTAAAGCTGGAGATGATGTGATTGTCACTGGTCTCTTGACTGCAAAATGGTCTCCAGAGTTGAAAGATGTGCGCTGTGACCTTGATCCTGTATTAATAGCCAACAATGTAAGGAGGACCAATCAACTGAAGTCAGAAATGGACATTTCTGATGACTTAGTTACAAAATTCAAGCAGTTCTGGGAACATTTCAAAGATGCACCCTTAAAAGGGAGGAATGCTATTCTTCGAGGAATTTGCCCACAAGTATTTGGCCTGTTTACTGTCAAGCTGGCCGTTGCATTAACACTTATAGGAGGTGTTCAACATGTCGATGCTTCTGGAACAAGGGTAAGAGGGGAATCTCACTTACTCTTGGTTGGTGATCCCGGCACTGGAAAGTCTCAGTTTCTGAAATTTGCAGCGAAATTGAGCAATAGATCTGTTATTACCACTGGGCTGGGAAGCACAAGTGCTGGATTGACGGTTACTGCAGTGAAGGATGGAGGTGAGTGGATGTTGGAAGCTGGAGCCCTTGTTTTAGCAGATGGAGGATTGTGCTGCATAGATGAATTCGATAGCATGAGGGAACATGACAGGGCAACAATACATGAAGCCATGGAGCAGCAAACAATAAGTGTAGCTAAGGCTGGTCTTGTAACAACACTCAGCACTAGAACAACGGTATTTGGTGCCACAAATCCTAAAGGGCAATATGACCCCGATCAACCTCTGTCTGTCAATACAACACTCTCTGGTCCTTTACTTAGCAGGTTTGATATTGTCCTTGTGCTCTTGGATACAAAGAATCCTGAATGGGATGCAGTAGTTTCATCCCATATTCTTTCTGAGGCAGAACCTGATAGAGCCAACAACGATGAAGATCTAGCAAAAGTCTGGCCTCTTTCTACACTCAAGAGGTGA 1611 0.4513 MEVQLQSDPWEWEKPMATYLLRYHSDQLRSIASSPDPNLHYPLFIDFAELMEEHPHLARLIFSQPTPYLQAFDNAALLSHRIVVRDLEQEKNVVEKNFIHVRINISGSPLECSETFPTIGRVRVQHRGILLTVKGTVIRSGAIKMHEGERKYMCNKCKKSFTVYPEVEARNSISLPSICPMQKLKPCGGTNFQYVENTIVCHDYQEIKIQESTQVLGVGAIPRSILVILHDDLVDVVKAGDDVIVTGLLTAKWSPELKDVRCDLDPVLIANNVRRTNQLKSEMDISDDLVTKFKQFWEHFKDAPLKGRNAILRGICPQVFGLFTVKLAVALTLIGGVQHVDASGTRVRGESHLLLVGDPGTGKSQFLKFAAKLSNRSVITTGLGSTSAGLTVTAVKDGGEWMLEAGALVLADGGLCCIDEFDSMREHDRATIHEAMEQQTISVAKAGLVTTLSTRTTVFGATNPKGQYDPDQPLSVNTTLSGPLLSRFDIVLVLLDTKNPEWDAVVSSHILSEAEPDRANNDEDLAKVWPLSTLKR 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00661 536 PRINTS Mini-chromosome maintenance (MCM) protein family signature 348 363 IPR001208 GO:0003677|GO:0005524|GO:0032508
Arst10g00661 536 PRINTS Mini-chromosome maintenance (MCM) protein family signature 434 447 IPR001208 GO:0003677|GO:0005524|GO:0032508
Arst10g00661 536 PRINTS Mini-chromosome maintenance (MCM) protein family signature 484 492 IPR001208 GO:0003677|GO:0005524|GO:0032508
Arst10g00661 536 PRINTS Mini-chromosome maintenance (MCM) protein family signature 406 420 IPR001208 GO:0003677|GO:0005524|GO:0032508
Arst10g00661 536 Pfam MCM OB domain 122 250 IPR033762 -
Arst10g00661 536 Pfam MCM P-loop domain 309 512 IPR001208 GO:0003677|GO:0005524|GO:0032508
Arst10g00661 536 Gene3D - 146 202 - -
Arst10g00661 536 SUPERFAMILY Nucleic acid-binding proteins 40 257 IPR012340 -
Arst10g00661 536 ProSiteProfiles MCM family domain profile. 307 510 IPR001208 GO:0003677|GO:0005524|GO:0032508
Arst10g00661 536 Gene3D - 281 536 IPR027417 -
Arst10g00661 536 Gene3D - 122 250 IPR012340 -
Arst10g00661 536 SMART AAA_5 349 498 IPR003593 GO:0016887
Arst10g00661 536 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 317 514 IPR027417 -
Arst10g00661 536 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 42 536 IPR031327 GO:0003677|GO:0005524|GO:0032508
Arst10g00661 536 SMART mcm 115 534 IPR031327 GO:0003677|GO:0005524|GO:0032508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00661 Arst-Chr10 5508869 5514609 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00661 16 536 Core DNA Replication Machinery Family AT2G14050 75.191 0.0 827
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00661 K10738 - gmx:100776255 923.309