Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00633 ATGGAAGGGGGGAATAGGGCGGAAGCGGAGCGGTGGCTGTACACGGCCAACAAGCTCCTGAGTGCACGTGACCTGCATGGAGCTCGGTCATTCGCCATCAGGGCCCGCGAGTGTGACCCACGCTTCGAAGTCACAGAGCTACTTCTCACCGTAATCGACACCCTCGTGGCCGGCGAGGCCAGGATCAACGACCTCGTTGACTGGTACAGCATTCTCCAGGTTATTCGCTACTCACATAATCTCGACTACATCGCCGCCCAGTACCGCCGTCTCGCTGCCATTCTTGATCCACACCGCAACCCATTCGCGTTCTCCGCCTACGCCTTCTCCCTCGTCAACGACGCATGGTCTGTACTCTCAAACCCTTCCAAGAAAGCAATCTTCGATAACGACCTCAGGCTCCTTACCGAACCTCCTCCTCCTCCTCCTTCCCAACCCGCCCCTGTTCCTATCGTCCCTCAAGCTTTTCCAATCTTGCAGCAGAGGCATAATCTCAACAACCACCAAAACAATCATAATCAAAGCCACGACTTGAACCAGAACCAGAACCAGAACCACTTCCTCCACCAAAATCCGAATCAGAATCAGAACCACCTCATCAACCAGAATCAGCAGCAGCGACAGCGTCAGCAGCAGCAGCAGCAACAACAAGAGGAGGAACGGCAAAGGCAACAACAAGAGGAAGAACGGCAAAGGCAACAACAAGAGGAGGAACGGCAAAGGCAACAACAAGAGGAGGAACGGCAAAGGCAACAACAAGAGCAAGAGCAACAGAAACGGCGAGAACAAGAACAAGCGCTGCAACTTCAACGGCAACAACAAGAGCAAGAGCAATGGAAACGGCAACAACAAGAACAGGCGAAACTGCAACTGCAACGGCAACAGCAACAGCAGCAGCAACTGTTTTCACTGAGTAAGAACGCTATATCGACGGAAGCTCCCAGGGTTGTGGTGGTTGAGGAGGAGGAAGAGGAGGAGAGGCCGAGTCAGGACAATGTGACTCAGCTGACTGAGCCAACTCGGCCGGCTAGGGCTACTGAGTCGATTGAAACCGAGCTGAATGGAGCTTTCTGGACTGCGTGCCCTTACTGTTACGGTTTGTTTGAGTATCCGAAGGTGTACGAGGAGTGTACCTTGCTGTGCCAGAGCTGCCGGAGGCCTTTCCATGCGTTGGCGGTGAGGTCGCCGCCGGAGTTGACCGGGAAAGACGGGTTCATGTCCTTCTGCAGTTGGGGTTTCATGCCGCTAGGGTTTTCTGGTGATTTCAAGGATATAAGTGGTTCTGCTTCTCAATGGAACCCTTTCTCTGCTTTGGTTCCTTGTCCTCTCAAAGGTGCTGACAGATGGAGACATCTGAGAGGGCCTTGGGCTTACTATGATGATGAGGCTGCCGCCGCGTTTGTCGAGCATTCCGATACGACGGAAGATGATTCTGACGATGAGGATTGGAGGAATATTAATGCGAATAAGAAGGTGGGGAGGAAAAGAAGAAGAAGAAGGAATAGGAAGAGTTCTGCCACCACTGCTGGTGGCAATGCAAGCACACCAGTGGAGAGGCCTAGGAGAGGGGTTCGTAACCGTTCTGGCAATGCTGGTGTGGAAAATGGTGAGGCTGTTGGTGCTGACTCTGCAGCAGTGCCCATTGCAGCTAGGCTAGAATCTGGCAAGAAAGCTGCATTGGCAAGTTTGAGGAGGAGGGGTGCTGGTAATTTGGGGAAGTTGGATCTGAATGTGGAGTTTAGTAATGATGTGGAAGAGACTGCCAATGGAGTACGCGATAGGGCGAATGCAGGTGGGCCGGGTAATGCGGAGGATAACATTGAAGGGATTGGGTTCTTTGAAGGGCTTGATGAGTTCTTGAGCAGCTTGCCTATTCTCAATGCTGTTGCAGATGATAAGGTTAAGGGTCATTAG 1914 0.5256 MEGGNRAEAERWLYTANKLLSARDLHGARSFAIRARECDPRFEVTELLLTVIDTLVAGEARINDLVDWYSILQVIRYSHNLDYIAAQYRRLAAILDPHRNPFAFSAYAFSLVNDAWSVLSNPSKKAIFDNDLRLLTEPPPPPPSQPAPVPIVPQAFPILQQRHNLNNHQNNHNQSHDLNQNQNQNHFLHQNPNQNQNHLINQNQQQRQRQQQQQQQQEEERQRQQQEEERQRQQQEEERQRQQQEEERQRQQQEQEQQKRREQEQALQLQRQQQEQEQWKRQQQEQAKLQLQRQQQQQQQLFSLSKNAISTEAPRVVVVEEEEEEERPSQDNVTQLTEPTRPARATESIETELNGAFWTACPYCYGLFEYPKVYEECTLLCQSCRRPFHALAVRSPPELTGKDGFMSFCSWGFMPLGFSGDFKDISGSASQWNPFSALVPCPLKGADRWRHLRGPWAYYDDEAAAAFVEHSDTTEDDSDDEDWRNINANKKVGRKRRRRRNRKSSATTAGGNASTPVERPRRGVRNRSGNAGVENGEAVGADSAAVPIAARLESGKKAALASLRRRGAGNLGKLDLNVEFSNDVEETANGVRDRANAGGPGNAEDNIEGIGFFEGLDEFLSSLPILNAVADDKVKGH 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00633 637 Coils Coil 193 301 - -
Arst10g00633 637 MobiDBLite consensus disorder prediction 470 535 - -
Arst10g00633 637 MobiDBLite consensus disorder prediction 320 344 - -
Arst10g00633 637 MobiDBLite consensus disorder prediction 166 257 - -
Arst10g00633 637 Pfam DnaJ domain 67 129 IPR001623 -
Arst10g00633 637 Gene3D DnaJ domain 63 133 IPR036869 -
Arst10g00633 637 SUPERFAMILY Chaperone J-domain 61 132 IPR036869 -
Arst10g00633 637 MobiDBLite consensus disorder prediction 490 504 - -
Arst10g00633 637 ProSiteProfiles dnaJ domain profile. 67 132 IPR001623 -
Arst10g00633 637 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 516 - -
Arst10g00633 637 MobiDBLite consensus disorder prediction 166 213 - -
Arst10g00633 637 SMART dnaj_3 66 124 IPR001623 -
Arst10g00633 637 CDD DnaJ 67 121 IPR001623 -
Arst10g00633 637 ProSitePatterns Nt-dnaJ domain signature. 109 128 IPR018253 -
Arst10g00633 637 MobiDBLite consensus disorder prediction 214 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00633 Arst-Chr10 5406200 5408930 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00633 334 636 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 40.514 6.64e-56 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00633 - - aip:107623843 619.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g04212 3 117435423 117437272 Arst10g00633 10 5406200 5408930 PCT