Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00612 ATGGTGCAACAGAAAATAATGATGAATTCCGAAGGTGGCAATGAAGATTGCTTAGGTTGGGCAGCAAGAGATGCATCTGGTGTTCTCTCACCATATAAATTCAGTCGCAAGGCTGTAGGAAACGATGATGTTTATGTTAAGATCACACACTGCGGTATTTGTTATGCTGATGTAGTTTCCACAAGGAATTCATTTGGTGCCACAAATTACCCTGTTGTGCCCGGACATGAGATTGCAGGCATTGTGACAAAGGTTGGTTCCAATGTCCAACGTTTCAATGTTGGTGACCATGTTGGAGTAGGGACTTATGTTAACTCGTGCCGCGACTGCCGAAATTGCAATGCAGGACTTGAAATTCAATGTGGTAAAGGACGAGTTTTTACTTATGATAGTGTTGATTCTGATGGTACAATCACAAAAGGAGGATACTCCACTTTCATAGTAGTTCATCATAGGTATTGTTTTATGATACCAAAGAGCTATCCATTGGCTTCAGCAGCACCTTTGCTCTGTGCCGGAATCACTGTTTATTCGCCGATGATTCGTCACAATATGAATCAGCCTGGTAAATCTCTAGGAGTTATTGGCCTTGGTGGCCTTGGACATATGGCAGTTAAATTTGGAAAGGCTTTTGGTTTGGATGTAACAGTTTTCAGCACCAGCATATCTAAAAAAGATGAGGCCCTAAATCTTCTTGGTGCAGATAATTTTGTTGTTTCATCTGATCAAGAACAAATGAGTGCATTGGCTGAGTCATTAGACTTTATAATTGACACAGCATCTGGTAATCACCCTTTTGATCCTTACATGTTTCTTCTGAAAACATGTGGTGTCTTAGTCTTAGTTGGGGCTCCAAGTGAAATCAAATTAAGCCCAGGAAGCCTTATTGGTGGGATGAGAAGCATTTCTGGAAGTGCTGCAGGAGGCACAAAAGATACCCAAGAGATGATTGATTTGTGTGCTGAAAAGGAGATTTATCCAAATATAGAAGTGATTCCCATTGAATATGCTAATGAAGCTTTTGAGAGGATCATAAACAAAGATGTCAAGTATAGGTTTGTGATAGACATTGAAAATTCCTTCAAGTAA 1089 0.4013 MVQQKIMMNSEGGNEDCLGWAARDASGVLSPYKFSRKAVGNDDVYVKITHCGICYADVVSTRNSFGATNYPVVPGHEIAGIVTKVGSNVQRFNVGDHVGVGTYVNSCRDCRNCNAGLEIQCGKGRVFTYDSVDSDGTITKGGYSTFIVVHHRYCFMIPKSYPLASAAPLLCAGITVYSPMIRHNMNQPGKSLGVIGLGGLGHMAVKFGKAFGLDVTVFSTSISKKDEALNLLGADNFVVSSDQEQMSALAESLDFIIDTASGNHPFDPYMFLLKTCGVLVLVGAPSEIKLSPGSLIGGMRSISGSAAGGTKDTQEMIDLCAEKEIYPNIEVIPIEYANEAFERIINKDVKYRFVIDIENSFK 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00612 362 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 162 325 IPR036291 -
Arst10g00612 362 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 192 219 IPR029752 -
Arst10g00612 362 SMART PKS_ER_names_mod 27 355 IPR020843 GO:0016491
Arst10g00612 362 Gene3D - 20 357 - -
Arst10g00612 362 Pfam Alcohol dehydrogenase GroES-like domain 42 155 IPR013154 -
Arst10g00612 362 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 75 89 IPR002328 GO:0008270|GO:0016491
Arst10g00612 362 FunFam Cinnamyl alcohol dehydrogenase 172 327 - -
Arst10g00612 362 PANTHER ALDEHYDE REDUCTASE 16 360 IPR047109 GO:0016616
Arst10g00612 362 SUPERFAMILY GroES-like 23 190 IPR011032 -
Arst10g00612 362 Gene3D - 172 327 - -
Arst10g00612 362 Pfam Zinc-binding dehydrogenase 199 321 IPR013149 -
Arst10g00612 362 CDD CAD1 19 356 IPR047109 GO:0016616
Arst10g00612 362 FunFam Putative cinnamyl alcohol dehydrogenase 6 328 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00612 Arst-Chr10 5186547 5188736 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00612 7 362 Monolignol Biosynthesis Gene Families AT1G72680 70.225 0.0 512
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00612 K00083 - gmx:100807617 578.556