Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00603 ATGGAGTGCTATGGTAGGATGGGCAAGGCAAACAGTTTGTCTCCAAATGAAAGTGAAAATGAGTTAGGCCTTTCAAACAACGACGTTGTTGACGAGGATGACTTAAGAAAGGTTGAGTTGTTGTCGGATGATGATGGTCGTGAATATGGAGATGTGACTGGGTTAAGTGCAGATGATATAATGAAAAAGGTGTTTCGAAGTAAAGAGCGTGCATATGAGTTTTATTGTAGGGTAGGAAAATGCAATGGATTTGGGTCCCGTAAGGGAGACTATGCAAAGGATGAAGATGGGACTGTAGTGAGAAGGAGGTTCTTCTGTAATAGGGCTGGCCTAAGGGATGGGAAACACTACAATAGACTAGACAGGAAGAGATGCCATAGGCCTAAGACACGCACGAATTGCCAAGCCTTGATGTTTGTATAA 423 0.4303 MECYGRMGKANSLSPNESENELGLSNNDVVDEDDLRKVELLSDDDGREYGDVTGLSADDIMKKVFRSKERAYEFYCRVGKCNGFGSRKGDYAKDEDGTVVRRRFFCNRAGLRDGKHYNRLDRKRCHRPKTRTNCQALMFV 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00603 140 Pfam FAR1 DNA-binding domain 73 140 IPR004330 -
Arst10g00603 140 MobiDBLite consensus disorder prediction 1 26 - -
Arst10g00603 140 MobiDBLite consensus disorder prediction 11 25 - -
Arst10g00603 140 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 15 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00603 Arst-Chr10 5059566 5059988 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Arst10g00603 FAR1 1e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00603 - - adu:110276739 281.567