Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00594 ATGACTTTCAAGCGCAGAAACGGAGGAAGAAACAAGCATGGCCGTGGCCACGTCAAATTCATTCGCTGCTCCAATTGCGGCAAGTGCTGCCCCAAGGACAAATCAATCAAGAGGTTTCTTGTGAGGAACATTGTTGAGCAGGCTGCAGTTCGTGATGTTCAGGAAGCCTGTGTCTATGAGCAATACACTCTTCCGAAGCTGTATGTGAAGATGCAATATTGTGTTTCGTGTGCTATTCACTCTCACGTTGTGAGGGTGCGATCTCGCACTGATAGGAGGAACCGTGAGCCTCCGCAGCGCTTTGCTAGGCGCAGGGATGATGCACCAAGGCCCGGTCAACCTGGTCAAGCTCCTCGTCCTATTGGAGTTGGAGCTGGAGCTGGAGCTGCTCGTGCTTAG 399 0.5213 MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKSIKRFLVRNIVEQAAVRDVQEACVYEQYTLPKLYVKMQYCVSCAIHSHVVRVRSRTDRRNREPPQRFARRRDDAPRPGQPGQAPRPIGVGAGAGAARA 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00594 132 MobiDBLite consensus disorder prediction 89 110 - -
Arst10g00594 132 MobiDBLite consensus disorder prediction 85 132 - -
Arst10g00594 132 FunFam 40S ribosomal protein S26 1 114 - -
Arst10g00594 132 Gene3D Ribosomal protein S26e 1 114 IPR038551 -
Arst10g00594 132 PANTHER 40S RIBOSOMAL PROTEIN S26 1 122 IPR000892 GO:0003735|GO:0005840|GO:0006412
Arst10g00594 132 ProSitePatterns Ribosomal protein S26e signature. 73 80 IPR000892 GO:0003735|GO:0005840|GO:0006412
Arst10g00594 132 Pfam Ribosomal protein S26e 1 106 IPR000892 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00594 Arst-Chr10 4958419 4959746 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00594 1 116 Cytoplasmic Ribosomal Protein Gene Family AT3G56340 84.483 3.94e-70 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00594 K02976 - gmx:100808790 207.994