Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00589 ATGGCTATGGAGAACAACTATTCATACCCATCTTACCCAGACTCAGGGGACTCTTCTCCGCGCTCAAGAGAGATCGACTTCGAGAACCCTCCTCCATGGGACGACCAACAACCGCCACCCAACTACAAGGCCAAGTTCATGTGCAGTTACGGCGGCAAGATCCAGCCTCGCACCCACGACAACCAGCTCTCCTACGTCGCCGGCGAGACCAAGATCCTCGCCGTCGACCTCAACATCAAGTTTAACGCCATGATCGCCAAGCTCTCCGCCCTCTGCGGCTGCGACCCCAAGGACCTCTCCTTCAAGTACCAGCTCCCTGGTGAGGATCTTGACGCTCTCATCTCCGTCACTAATGATGACGACCTTGACCACATGATGCACGAGTACGATCGACTCTACCGTGCTTCCGCTAGACCTGCCCGCATGCGATTATTCCTCTTCCAAGCCAACACTACTAACACTAACAGTAATAACAACCTTCCTCCCTCTTCTGATAACCGTCTTGACCCGGCCCAACCCGACCCGCTCAAACCGAATCCCAACGTGGATTATCTCTTTGGTCTTGAGAAGAATACTGCTGTTAATGTTGCTCCTCAGCAGCTTCAGCCACCTGCGCCGTCACCGGCGGCAGCTCCTGTCCCGGTGAAGTTCCATGATACGGTGCCGGAGCCTGTCCCGCCGCCGCCGGAGTACCAACAGAGGGTTGCCGTTAATACCTCCGATCGTGTCGTTGGATCGGATCCGAACTTGAGCCACCCGCTGGAAGTTCAGAGGCAGTTTCAGAGGATGCAAATTTCGGAAAGCGATCAAGCTGCTGCGTATCGGAGGAAGAGCGAGGAAGCTCTTGTCGGGAATTATGCCCCTACCGGCGGTGACTATTACGCTCAGAAAGCTCCTCCGGCGAGTGCGCCGTTACAACCTGGATATTGGCCTGATAAGCATGTTTCCAGCGAGGCTTATCATCCGGCGGCATCGTCCGCTGCCGGCGGTGGTGAGCCGCCGGTTTATGTGATTCCGGCGCATGGAGCGTTCTATCATCACGCGCCTGTAGTTCGTCCACAGACTCCTCCACCGACAACGCAGGGGTACTATGCGGTGCAGCGAATGGCTTCCGACGGTTACCGCGAAGCTCCGTTGTACGGCGGCGTGCCGCCACATAAGCCGCCGTTTTCTTCGGCTGCTCCGGCGAACATGGCACCACCACAGCCGCTTAAAGGTCCCGGTTATACGGAAGGATTCGGGGTGGTTAGGCCAGTTGGGATGCAGGATAATACCGGTGCGGCTTACGCACAGGTGGCGTACGATAGTGGAAGTGGAAGACAGGTTTACTACACTGCGCCGGGTGGTGGTGTCGTGCACGCGCCGCCGTACCAAGGGGTTACTCAGGCTCTAACCGGTGGTGGGGTGTCGTTGGGTCAAGATGGTAAGGTCATAAGCAAGGTTTCTCAAGGTTCTGTGTGA 1461 0.5681 MAMENNYSYPSYPDSGDSSPRSREIDFENPPPWDDQQPPPNYKAKFMCSYGGKIQPRTHDNQLSYVAGETKILAVDLNIKFNAMIAKLSALCGCDPKDLSFKYQLPGEDLDALISVTNDDDLDHMMHEYDRLYRASARPARMRLFLFQANTTNTNSNNNLPPSSDNRLDPAQPDPLKPNPNVDYLFGLEKNTAVNVAPQQLQPPAPSPAAAPVPVKFHDTVPEPVPPPPEYQQRVAVNTSDRVVGSDPNLSHPLEVQRQFQRMQISESDQAAAYRRKSEEALVGNYAPTGGDYYAQKAPPASAPLQPGYWPDKHVSSEAYHPAASSAAGGGEPPVYVIPAHGAFYHHAPVVRPQTPPPTTQGYYAVQRMASDGYREAPLYGGVPPHKPPFSSAAPANMAPPQPLKGPGYTEGFGVVRPVGMQDNTGAAYAQVAYDSGSGRQVYYTAPGGGVVHAPPYQGVTQALTGGGVSLGQDGKVISKVSQGSV 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00589 486 MobiDBLite consensus disorder prediction 152 166 - -
Arst10g00589 486 Gene3D - 64 149 - -
Arst10g00589 486 PANTHER OS05G0427100 PROTEIN-RELATED 12 355 - -
Arst10g00589 486 SMART PB1_new 58 149 IPR000270 GO:0005515
Arst10g00589 486 MobiDBLite consensus disorder prediction 152 178 - -
Arst10g00589 486 CDD PB1_UP2 47 147 - -
Arst10g00589 486 Pfam PB1 domain 59 148 IPR000270 GO:0005515
Arst10g00589 486 MobiDBLite consensus disorder prediction 1 18 - -
Arst10g00589 486 SUPERFAMILY CAD & PB1 domains 59 157 - -
Arst10g00589 486 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00589 Arst-Chr10 4895663 4897451 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00589 43 155 MAP Kinase Kinase Kinase AT3G46920 42.982 5.30e-24 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00589 - - adu:107480527 530.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g00589 10 4895663 4897451 Arst10g00589 10 4895663 4897451 ECH
Arst3g04253 3 117848421 117850180 Arst10g00589 10 4895663 4897451 PCT