Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00573 ATGTTCGCCGGAATAATTCTCTGCCACGGTTCGCCGCAGCCTGTTTTTCTTCTTCTTTTTCTTCTTAATGCTCTGTTTTTCCTCTGTTTTGTTACCTCCTCTCATGAAACTGAGCTTCAAATTCTTTTGAGTTTCAAGTCTTCTATTCAAAGTTCAAAACCAAATGTTTTCAGTTCATGGAACCAAGCGAATTCTCACTGCAACTTCACCGGGATTGTGTGCTCAGATGGTTCTGTCTCAGAAATCAACCTTGCAAGTAAAGCATTAGTTGGAACTCTTCCGTTTGACTCAATCTGTGAGCTTCAAATGCTGAAGAAAATCTCTGTAGAGTCCAATTTATTGCATGGGATCATCAGTGATGACTTGAAAAAGTGCAAGAATTTGAAATACTTGGATTTGGGTGGGAATTCATTCACTGGTTCGGTTCCTGATTTGTCAACTCTGAACAAGTTAGAGTACTTGAATTTGAATGCAAGTGGAATCTCTGGTGCATTTCCATGGAAATCATTGGAGAATTTGACAGAACTCACATTCTTGAGCGTTGGTGATAACCTTTTGGAGAAAAGCAAGTTCCCTTTGGAGGTTTTAAAGCTTTCAAATTTGTATTGGCTTTACCTCACAAATTGCAGCATCACTGGGAATATTCCAATTGGTATTGGGAATCTCACAAAGCTTGAGAATCTTGAGCTTTCAGATAACCACTTAACTGGTGAGATTCCAAAAGATATTGTGCATCTTCAAAGCCTAAGGCAACTTGAGCTTTATGATAACTTCTTGAGTGGAAAAATCCCTGTTGGATTTGGTAACCTCACAAATCTTGAATATTTTGATGCTTCTAATAACCAGCTTGAAGGTGATCTTTCTCAGATAACTTCATCATTGAAAAGCCTTTCATCATTGCAGCTTTTTCAGAACAAGTTATCAGGTACAATTCCAGAAGAGCTTGGAGAATTGAAAAGCCTCAAGGAACTTTCTCTCTATGGTAACATGCTCACTGGTCCTCTTCCTCAGAAGCTTGGTTCCTATGGAGGCATGGATTACATTGATGTTTCGGATAATTCGTTTTCCGGTTCCATACCGCCTGATATGTGCAAGAACAACCATATGACAGACTTCTTACTTTTGAACAACAGCTTCACTGGAACCATACCTGAAACATATGCTAATTGTTCTTCCATGATTCGCTTTCGTGCGAGTCGCAATTCGCTTTCTGGTGTTGTTCCTTCAGGTCTATGGGGCTTGCCAAATCTCCAAATTATTGATCTTTCAATGAATCATTTAGAAGGGTCAATAACTAGTGATATTGGCAAAGCAAAATCACTTGCTCAGATTTTCTTGTCTTACAATCAATTCTCAGGTGAGTTACCATTGGAAATCTCAGAAGCTTCTTCATTGGTATCAATTGAGTTAAATTCAAATCAAATTTCAGGACAAATACCAGATACTATTGGCAACTTGCATAAGCTAACTACTCTTAAATTGGACATGAACAATGTTTCTGGTGTTATACCATATTCTATCAGTTCTTGCGTCTCTCTTAATGAAATAAACTTTGCTGGTAACTCTCTTTCCGGAGAAATACCAGTTGGTATTGGATCTTTGCTCACACTCAACTCATTGAACTTGTCCTCGAATAAACTTTCCGGCGAAATTCCATCAAGTTTATCTGCACAAAGGCTTAGCCTTCTTGATTTATCAAACAACCAGTTGTCTGGTCCCATACCAGATTCACTTGCTATCTCAGCTTACAAAGATGGTTTCATTGGGAATCCTCACTTATGCAGCCAGATTTTGGAGAATTTCAAGCCATGCTCCTTTGAATCCGGGGGCTCGAGGCGAATCAGAACACTTGTGCTGTGTTTGATTGCTGCCTTAATGGTTATTGCTGTTTCTCTGTGCTATATCCTCTTCTTGAAACTGAAGCAGGACAAGTTTGAGAAGCCGGTTCTGAAGACTAATTCTTGGAATATCAAGCAGTATCACTTGCTAAACTTCAACCAGAGCGAGATCATTAATGGGATTAAAGCAGAGAACTTGATTGGCAAAGGAGGATCAGGGAATGTTTACAGGGTTGTGCTTAAAAGTGGTGAAGAATTCGCAGTCAAACACATATGGACTTCAAATCCGAGCGACCGGGGAAGTTATAGGAGCACCTCAGCAATGCTGAAAAGGTGTTCAAGGTCCTCATCAGAGTATGATGCAGAAGTGGCCACTCTCAGCTCCATAAGGCATGTCAATGTGGTGAAGCTCTATTGCAGCATCACAAGTGAAGATAGTAGCTTGCTTGTTTACGAATTCTTGCCGAATGGAAGCTTGTGGGATAGCTTGCATACAAGTAAGAAGGCTCAGATGGGGTGGGAGGTTAGGTATGAGATTGCACTGGGTGCTGCTAGAGGATTGGAGTATCTGCACCATGGTTGTGTTAGACCAGTTATACATAGAGATGTTAAGTCCAGTAACATCTTGCTTGATGAAGAATGGAAGCCAAGGATTGCTGATTTCGGTCTTGCTAAGATTGTTCATGGAGGAGCAGGAAATTTGACTCATGTCATTGCTGGAACACTTGGATACATGGCTCCTGAATATGCCTACACTTGTAAGGTGACAGAGAAGAGTGATGTTTATAGCTTCGGAGTAGTGCTAATGGAACTAGTAACAGGGAAGAGGCCTATAGAGGCAGAGTTTGGGGAGAGCAAGGACATTGTGTATTGGGTATGCAGCAATATGAGGAGCAAAGAGGAAGCTCTTGAGTTGGTGGATTCCACCATAGCAAAGCATTCCAGAGAAGATGCCATGAAGGTGTTGCGAATGGCAGCATTGTGCACAGCCAAGATTCCATCTTCAAGACCCTCCATGAGAATGGTTGTTCAAATGCTGGAAGAGGCAGACCCTTGTGCTCTTACCAACATAGTGATCACACATGATTAA 2928 0.4098 MFAGIILCHGSPQPVFLLLFLLNALFFLCFVTSSHETELQILLSFKSSIQSSKPNVFSSWNQANSHCNFTGIVCSDGSVSEINLASKALVGTLPFDSICELQMLKKISVESNLLHGIISDDLKKCKNLKYLDLGGNSFTGSVPDLSTLNKLEYLNLNASGISGAFPWKSLENLTELTFLSVGDNLLEKSKFPLEVLKLSNLYWLYLTNCSITGNIPIGIGNLTKLENLELSDNHLTGEIPKDIVHLQSLRQLELYDNFLSGKIPVGFGNLTNLEYFDASNNQLEGDLSQITSSLKSLSSLQLFQNKLSGTIPEELGELKSLKELSLYGNMLTGPLPQKLGSYGGMDYIDVSDNSFSGSIPPDMCKNNHMTDFLLLNNSFTGTIPETYANCSSMIRFRASRNSLSGVVPSGLWGLPNLQIIDLSMNHLEGSITSDIGKAKSLAQIFLSYNQFSGELPLEISEASSLVSIELNSNQISGQIPDTIGNLHKLTTLKLDMNNVSGVIPYSISSCVSLNEINFAGNSLSGEIPVGIGSLLTLNSLNLSSNKLSGEIPSSLSAQRLSLLDLSNNQLSGPIPDSLAISAYKDGFIGNPHLCSQILENFKPCSFESGGSRRIRTLVLCLIAALMVIAVSLCYILFLKLKQDKFEKPVLKTNSWNIKQYHLLNFNQSEIINGIKAENLIGKGGSGNVYRVVLKSGEEFAVKHIWTSNPSDRGSYRSTSAMLKRCSRSSSEYDAEVATLSSIRHVNVVKLYCSITSEDSSLLVYEFLPNGSLWDSLHTSKKAQMGWEVRYEIALGAARGLEYLHHGCVRPVIHRDVKSSNILLDEEWKPRIADFGLAKIVHGGAGNLTHVIAGTLGYMAPEYAYTCKVTEKSDVYSFGVVLMELVTGKRPIEAEFGESKDIVYWVCSNMRSKEEALELVDSTIAKHSREDAMKVLRMAALCTAKIPSSRPSMRMVVQMLEEADPCALTNIVITHD 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00573 975 SUPERFAMILY L domain-like 196 429 - -
Arst10g00573 975 SUPERFAMILY L domain-like 375 579 - -
Arst10g00573 975 SUPERFAMILY Protein kinase-like (PK-like) 659 960 IPR011009 -
Arst10g00573 975 ProSitePatterns Protein kinases ATP-binding region signature. 680 702 IPR017441 GO:0005524
Arst10g00573 975 Gene3D Ribonuclease Inhibitor 344 605 IPR032675 -
Arst10g00573 975 Gene3D Ribonuclease Inhibitor 28 92 IPR032675 -
Arst10g00573 975 Gene3D Ribonuclease Inhibitor 93 343 IPR032675 -
Arst10g00573 975 FunFam Receptor-like protein kinase HAIKU2 657 766 - -
Arst10g00573 975 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 767 972 - -
Arst10g00573 975 FunFam Probable inactive receptor kinase RLK902 35 192 - -
Arst10g00573 975 Pfam Leucine rich repeat N-terminal domain 36 75 IPR013210 -
Arst10g00573 975 FunFam Leucine-rich receptor-like protein kinase family protein 193 289 - -
Arst10g00573 975 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 28 959 - -
Arst10g00573 975 ProSiteProfiles Leucine-rich repeat profile. 127 149 IPR001611 GO:0005515
Arst10g00573 975 ProSiteProfiles Protein kinase domain profile. 674 975 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g00573 975 FunFam Leucine-rich repeat receptor-like protein kinase TDR 291 606 - -
Arst10g00573 975 Pfam Leucine rich repeat 224 283 IPR001611 GO:0005515
Arst10g00573 975 SMART serkin_6 674 940 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g00573 975 ProSitePatterns Serine/Threonine protein kinases active-site signature. 811 823 IPR008271 GO:0004672|GO:0006468
Arst10g00573 975 SMART LRR_sd22_2 222 245 - -
Arst10g00573 975 SMART LRR_sd22_2 125 156 - -
Arst10g00573 975 SMART LRR_sd22_2 462 488 - -
Arst10g00573 975 SMART LRR_sd22_2 173 195 - -
Arst10g00573 975 SMART LRR_sd22_2 101 122 - -
Arst10g00573 975 SMART LRR_sd22_2 318 333 - -
Arst10g00573 975 SMART LRR_sd22_2 270 299 - -
Arst10g00573 975 Gene3D Phosphorylase Kinase; domain 1 658 766 - -
Arst10g00573 975 SMART LRR_typ_2 173 198 IPR003591 -
Arst10g00573 975 SMART LRR_typ_2 294 318 IPR003591 -
Arst10g00573 975 SMART LRR_typ_2 486 509 IPR003591 -
Arst10g00573 975 SMART LRR_typ_2 414 438 IPR003591 -
Arst10g00573 975 SMART LRR_typ_2 534 558 IPR003591 -
Arst10g00573 975 SMART LRR_typ_2 222 246 IPR003591 -
Arst10g00573 975 SMART LRR_typ_2 270 293 IPR003591 -
Arst10g00573 975 Gene3D Transferase(Phosphotransferase) domain 1 767 968 - -
Arst10g00573 975 Pfam Protein kinase domain 677 957 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g00573 975 SUPERFAMILY L domain-like 38 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00573 Arst-Chr10 4799075 4802919 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00573 25 975 Receptor kinase-like Gene Family AT1G09970 57.411 0.0 1045
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Arst10g00573 Pkinase 1.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00573 - - gmx:100811489 1392.87