Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00560 ATGACGTATGATATTTTCATCCCGTTTGATTTTATTGGTATGATTGCTGCAAGTTTCTCATTTACTGAGCAATGGTTGAACAGGCAACAAGAGTTTAAGCAGCAGCAGCAACCTGTGGTAGACAGAATAGTGGCATTTGAGGGGAGAAATTTATTATCTGATGGAAGAGATAAAGAGATAGAAAGGGAGCAAATCCGACAAGGAATTGATGAGTTTGGAATATTGTATTCTGAATTAAGTGATTCTAACCGATCTGAAAGCAGTAATGGTTCTTTTGCATTCCCTGTCATAAGATGGTCTGGTGTAGATGGGGAGGATAATGTTCTTGTGATGGATTTGCTTGGGCTTAGTCTTGAGGATCCCTTTGTGTATTGTGGAAGGAAGTTCTCATTGAAGACAGTATTGATGTTGGCTGATCAAATGATGACTAGAATAGAATATGTGCATTCCAAAGGTTTTCTACATAGAGATATAAAGCCTGACAACTTCCTCATGGGACTTGGTCGGAAAGCAAACCAGGTTTACATAATTGATTTTGGGCTTGCAAAACGATATTAGGACTCTACAACCAATCGCCACATCCCTTACAGGCTTGCAATACACATCTTGGGATTGGATGAAACTTTTGAGAGCAAGAATGTCTAA 645 0.3907 MTYDIFIPFDFIGMIAASFSFTEQWLNRQQEFKQQQQPVVDRIVAFEGRNLLSDGRDKEIEREQIRQGIDEFGILYSELSDSNRSESSNGSFAFPVIRWSGVDGEDNVLVMDLLGLSLEDPFVYCGRKFSLKTVLMLADQMMTRIEYVHSKGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKRYXDSTTNRHIPYRLAIHILGLDETFESKNV 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00560 214 SUPERFAMILY Protein kinase-like (PK-like) 93 203 IPR011009 -
Arst10g00560 214 PANTHER CASEIN KINASE-RELATED 94 195 - -
Arst10g00560 214 Gene3D Transferase(Phosphotransferase) domain 1 56 203 - -
Arst10g00560 214 ProSitePatterns Serine/Threonine protein kinases active-site signature. 153 165 IPR008271 GO:0004672|GO:0006468
Arst10g00560 214 ProSiteProfiles Protein kinase domain profile. 6 214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g00560 214 Pfam Protein kinase domain 126 190 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00560 Arst-Chr10 4649534 4653736 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00560 103 182 EF-hand Containing Proteins AT2G46700 33.333 4.12e-08 50.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Arst10g00560 Pkinase 4.6e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00560 K08960 - adu:107468584 412.92