Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00558 ATGTTGAGTTTTGTTCCAATTCATATATTCTTGTGGTCATTATTCTGTTTCTTCATGATTGTTTATGGAGCTGAATTAGGTGACATCAATTGCCTAAGAGAAATCAACAACTCATCGGACTCATCTAATCAAATATGGGATTTCAATTTCAATATCAACACCATAGATTTGTGCTCATCATTCACTGGTATTGAATGCATGACCAGTGGTATTGATGAAGAAAAAGTAATAAGTATCAAGCTTTCTAACATGGGGTTAGAAGGCCAATTTCCTCATTGCATTGAGAATTTCTCATGGCTGCAGAATCTGAACCTTTCACACAACAAGCTCTTTGGGAATATCCCACCTGATATTTCAAGTAAGCTTCCATATCTAACCTCACTTGACCTATCAAACAACAACTTTTATGGTGAAATCCCAAAGGCTATTGCAAACTTGTCTTACTTGAATACCCTTAGACTTGATGGTAACCAGTTAAATGGAACAATCCCAAAAGAACTTGGCTTTCTTCCAAGGATCACAGTGTTCAGTGTTGCAAACAATTTGTTATCAGGGCCAGTGCCTGTGTTTGTGAACAATAATGTTAATGTTACCTTGAGCTATGTCAATAATAATGGACTCTGTGGGGGAACAACATTGGAAAGCTGTGATGAAGAGAGCTTATTTGGTAAACCCTTTTGGTATAGTTTTGTTATTGCTTTTGTTTGTTCAGCAACTTCTGTCATAGTAACTTTCATGGACTATACTCAACCTTGGAATGAATTCAAAAAGAGTAGTAGGAAGAGTAACACCATATATCCCTTGAGAAAAGAACAGAACAACCAAAAGCATACCACTAATGTAGCTCAATTGCTTCCACTGGCTTTGCAAGAGGAAGGAAATAAAGAGCTCTGTAGATTGTTGGAGAGATTGATACCAAGAATGAGCTTCATGGAGCTTTGCAAAGCAACTAACTACTTTAGCTCAAACAACATCATGGGGTTAGGAACAACAGGGATAATGTATAAGGCAGAGGTTTCAAATAACTGTTTGATAGCAGTGAAGAGATTCTATTATTCTGACAAGTACAAGAGACAATTCTTGCTTGAAACAATGATTCCAGGGAGACACATGCACCGAAACATAGCCTCTCTGCTTGGATTCTGCATAGAGAAGAAGGAGAGGATACTAGTCTATAGCTACATCTCAAATGGAACATTATGTCACTGGTTACATAATTCTCAATTGGAATGGCCTGAGAGGATTCACATTGCAATTGGGATAGCAAGGGGATTATCTTGGCTTCACAAAAAGTGCAAGATCATACACCTCAATCTATCTTCTGAATGTGTCTTGCTAGACAAGAATTTCGAGCCAAAAATTTCGAATTTCGGCAAAGCAAAGTTCATCATGAACCAAAAGAATCATGCAAGGATGAGACTGTTTCTGGTTGATGAAGTCATTGGGGTGAAGGGTTCTTTTGAGAAGGATATCTATGACTTTGGAATAATCCTTTTTGAGCTTATAACAGGACAAAAATTAAGCATAAGTAGTGATTCTTGTTCTACTAATTATGATGATGACATTGGTGTTGATAATAGCTCTTTGAGGAGCTATATTAGCAATAGGTTGTTCACTGATCCTAGTGATTTTTATTATGCCACTGACAAATGCATAACTGGGAAAGGGTTTGATGATAAAATTCATGGCCTCCTAGAAGTTGCATGCAAATGTGTTAAACCTTCTATGGAACAGAGGCCAAAGATGGATGATGTGTATAGAACTATTACAGACTTGTGGAAAGGTTGA 1788 0.3725 MLSFVPIHIFLWSLFCFFMIVYGAELGDINCLREINNSSDSSNQIWDFNFNINTIDLCSSFTGIECMTSGIDEEKVISIKLSNMGLEGQFPHCIENFSWLQNLNLSHNKLFGNIPPDISSKLPYLTSLDLSNNNFYGEIPKAIANLSYLNTLRLDGNQLNGTIPKELGFLPRITVFSVANNLLSGPVPVFVNNNVNVTLSYVNNNGLCGGTTLESCDEESLFGKPFWYSFVIAFVCSATSVIVTFMDYTQPWNEFKKSSRKSNTIYPLRKEQNNQKHTTNVAQLLPLALQEEGNKELCRLLERLIPRMSFMELCKATNYFSSNNIMGLGTTGIMYKAEVSNNCLIAVKRFYYSDKYKRQFLLETMIPGRHMHRNIASLLGFCIEKKERILVYSYISNGTLCHWLHNSQLEWPERIHIAIGIARGLSWLHKKCKIIHLNLSSECVLLDKNFEPKISNFGKAKFIMNQKNHARMRLFLVDEVIGVKGSFEKDIYDFGIILFELITGQKLSISSDSCSTNYDDDIGVDNSSLRSYISNRLFTDPSDFYYATDKCITGKGFDDKIHGLLEVACKCVKPSMEQRPKMDDVYRTITDLWKG 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00558 595 SUPERFAMILY Protein kinase-like (PK-like) 301 587 IPR011009 -
Arst10g00558 595 Pfam Protein tyrosine and serine/threonine kinase 324 521 IPR001245 GO:0004672|GO:0006468
Arst10g00558 595 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 119 211 - -
Arst10g00558 595 Gene3D Ribonuclease Inhibitor 29 218 IPR032675 -
Arst10g00558 595 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 10 592 IPR046959 -
Arst10g00558 595 Pfam Leucine rich repeat 100 159 IPR001611 GO:0005515
Arst10g00558 595 Gene3D Transferase(Phosphotransferase) domain 1 396 594 - -
Arst10g00558 595 SUPERFAMILY L domain-like 48 210 - -
Arst10g00558 595 ProSiteProfiles Protein kinase domain profile. 320 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g00558 595 Gene3D Phosphorylase Kinase; domain 1 283 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00558 Arst-Chr10 4631733 4633960 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00558 15 589 Receptor kinase-like Gene Family AT3G28450 31.313 1.04e-84 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Arst10g00558 PK_Tyr_Ser-Thr 9.4e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00558 - - ahf:112717205 1209.51