Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00557 ATGATCACCTGCATCATAGCACTCTCCAACCAAGTCCACCTTCAAAAGCAAGAACATATATTCTGTGCAGCTCTTTTTCAGTCTCTACTTTTCGAAGCATGTGGACGAACGGTTAACCCGGTTAACGGTGACGTTGGACTACTATGGACTGGAAACTGGCACATATGTCAGGCCGCCATTGAAACGGTGCTCCGAGGAGGCTCCCTCAGGCCTATGCCGGAGCTATTCGGTCTCAACGTGCCTGTTCCTGTTGCTGTTGACGCCGACTCCGAGAGAAAAGTCACGTGCACTGACGCGCGGAAGCTCCAAGACCTGAACCCGAGTCCGAGCATAAGGTTCACGAGCTCTCGATCTGGTAAAGACAGTTCCGGCTGGAAGCGGAAGCAATCAGAAGAGTGGGTCGCGGTGGGGAGGTGA 417 0.5324 MITCIIALSNQVHLQKQEHIFCAALFQSLLFEACGRTVNPVNGDVGLLWTGNWHICQAAIETVLRGGSLRPMPELFGLNVPVPVAVDADSERKVTCTDARKLQDLNPSPSIRFTSSRSGKDSSGWKRKQSEEWVAVGR 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00557 138 MobiDBLite consensus disorder prediction 121 138 - -
Arst10g00557 138 MobiDBLite consensus disorder prediction 103 120 - -
Arst10g00557 138 Pfam Lateral organ boundaries (LOB) domain 23 62 IPR004883 -
Arst10g00557 138 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 23 108 - -
Arst10g00557 138 MobiDBLite consensus disorder prediction 103 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00557 Arst-Chr10 4589421 4589837 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00557 22 104 AS2 family AT3G49940 62.069 5.58e-30 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Arst10g00557 LOB 6.9e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00557 - - adu:107468436 285.804