Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00517 ATGGCTGAGGAGTTTCAAGCTACAATTTGTGGTGATAACTATTGGTGGAACTCAAACAAAAGCTTGTTCTCTTTGATGGGGGGATCAATGACGTGTTCTGTAGCAGCTGCTAACGATTCAGCAAATAATTATGACTCTTTCTGGCAAGGTTCTGATTTCATGGATTTCAAGGGAGCAACAACAAAATCTTCTTTCAAAGGAGAAGATACAAACAAGTGTAGTAATAATGAATCATCAACATCAGCATCAGCAGTAGCAGGTGGAACCGTTGGGAGTATCTTCATCAATTCCACCTCACAAATGATGAGTGATGGCCTCTCATCTTCACCATCATTCACTTGGAATAATCCTTCTCTATTCGGTTGTAATGAAAGGTCAGAAAACAATTTCCAATCTATTGTGATTCAAGAAGAAACGGGATTAGATCCTTCTAATAATAACTCACAACAGATCCAGCAACAGCAAGAATTTTCGAATTCAATGGGTAGTGGATTTACAATTGAATCATCATTATCTGCATCTTATGATTATCCGTTGATGCAAGCAGGACTATTTGGTTCGACTGACTCATCATCATCACTTTTCACAACTAACCAACCAACCCTTCCTGAACTGTCACCAATATGGTCTACGGTGTCTTCCTTTATGAAGCCTTCATCATTTATGGAGCCAAAGCAACTTAATGGATTGCAATTCTCAAATAATACTCCTTTCTGTAATGCTTCAACTGAAGAGACACTTTATAGTATAAGATCTGATATCTTTTCTTCGTCTTCTTCTCAACCACAGCTATATCAAACACCACCAACAACTTTTGATAATAGCAAACCCAATAATGCTCTAACTAGTACTCCACTCAACAAGTTGAAGAGGGAAGAATCTCCAGAAAAAGCATCGTCATCAGTCTGTAGCAAAAATGTTTCTGGGCGCGTCTTCAAAAAAACGAGAATCGAAACGCCATCTCCTTTGCCTACTTTTAAGGTTCGAAAAGAAAAGTTAGGGGACCGAATTACTGCTCTTCAGCAATTGGTATCACCTTTTGGAAAGACGGACACTGCATCGGTTCTACATGAAGCCATTGAGTACATTAAATTTCTTCATGATCAAGTCAATGTTTTAACAGCTCCATATATGAAAAATGGGTCTTCTATTCAAGATCAACAGGGATGTGATTATGAAAAGGATTCAAAATGTTTAACGCAAGATTTGAATAGTCGAGGGCTTTGTTTGGTACCAGTTGCAAGCACATTTCCGATGGCTACTGAGACTACTGCTGATTTTTGGACGCCTACATTTGGAAACTCACTCATCGGGAATGTGGCAGTGGCAGGTAGTCATCAATGA 1344 0.3891 MAEEFQATICGDNYWWNSNKSLFSLMGGSMTCSVAAANDSANNYDSFWQGSDFMDFKGATTKSSFKGEDTNKCSNNESSTSASAVAGGTVGSIFINSTSQMMSDGLSSSPSFTWNNPSLFGCNERSENNFQSIVIQEETGLDPSNNNSQQIQQQQEFSNSMGSGFTIESSLSASYDYPLMQAGLFGSTDSSSSLFTTNQPTLPELSPIWSTVSSFMKPSSFMEPKQLNGLQFSNNTPFCNASTEETLYSIRSDIFSSSSSQPQLYQTPPTTFDNSKPNNALTSTPLNKLKREESPEKASSSVCSKNVSGRVFKKTRIETPSPLPTFKVRKEKLGDRITALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVNVLTAPYMKNGSSIQDQQGCDYEKDSKCLTQDLNSRGLCLVPVASTFPMATETTADFWTPTFGNSLIGNVAVAGSHQ 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00517 447 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 317 366 IPR011598 GO:0046983
Arst10g00517 447 MobiDBLite consensus disorder prediction 258 300 - -
Arst10g00517 447 FunFam Transcription factor bHLH123 family 327 389 - -
Arst10g00517 447 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 327 379 IPR036638 GO:0046983
Arst10g00517 447 MobiDBLite consensus disorder prediction 258 288 - -
Arst10g00517 447 Gene3D - 327 388 IPR036638 GO:0046983
Arst10g00517 447 CDD bHLH_AtbHLH_like 323 373 IPR045239 -
Arst10g00517 447 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 147 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00517 Arst-Chr10 4192807 4195560 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00517 1 433 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G61660 35.938 9.07e-53 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00517 - - adu:107468661 853.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g04301 3 118307983 118311440 Arst10g00517 10 4192807 4195560 PCT