Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00505 ATGAGAGTCTTCTTCACTCACCTTAACTCCCTCATTATCATTCTTATTAGCTTCTTCTTCTTCATTACTTCATCAACCTCTTTGGATACTTTAACCGGAACACAAATCCTCAAAACCAACCAAACCTTGTTGTCAGAAAACCAGACCTTCGTTCTAGGCTTCTTCAGAGGTTCCAACACCAACTATTACCTCGGAATATGGTACAACAACATCAGTCCTCAAACAATAGTTTGGGTTGCAAACAGAGACAATCCCATCGACAACTCCGCAGGCCATCTCAAGATCGGAGACAACGGAAACTTTGTCCTTCTCAATTCATCCGGGAACCCCGCATGGTCTTCCAACCAAACCAACGCCAAGAATCCAGTTATCCAGCTCCTCGATACCGGCAACCTTCTTCTTAAAGATTTATCAGACACGACAAATAATAACTACTTGTGGCAGAGCTTCGAATACCCAACGGATACCTTGTTACCGGGGATGAAGGTCGGTTGGAACCTGGACACAGGAACGGAGAAGCACTTAACATCATGGAAGGTCGAAGGTGAAGACCCTTCAAGCGGTGACTACACTTTGAAGATAGATTACCATGGTTTACCTGAGGCCCTCCTCAGGAGAAACCAAACTATAATATACCGAAATGGTCCTTGGAATGGTGAGAGATTTAGTGGGATCCCAGGGATGAAAGACAACACCAATGATCTCAAGTACAATTTCACTTATGATGAGCATGGGGTGTGGTTCTCTTTCTCCGTTACAGAACCTTCCTTGTTGTCGAGGATAATTCTGTCATCTGATTCTGATGGCCAGTATCAACGCTACATGTGGATACAAGGAAGATGGAACAAGTTCTCGTACACACCAAAGGATCCATGCGATTACTATAGACACTGTGGTCCGTATGGAGTGTGTGAGAATGATGCTTCCCCGATTTGCACTTGTATGCAGGGGTTCAGGCCTAAGAACCAAGAAGCTTGGAACTTGAGAGATGGGTCTGATGGGTGTGTGAGGAACACGGTTTTGAATTGTTCGACTGACAAGTTCTTGCATCTTGAGAACATGAAGCTGCCGGAGACGAGCAGTGTGTTTATGAATAAGAGTATGACACTTGATGAATGTGGGAGTTTGTGTAAGAGGAATTGTTCATGCACTGCATATGCAAACATTGATATCAGAAACGGAGGAAGTGGCTGTGTCATGTGGTTTGGCCAACTCTTTGACATGAATGTCCACCGTCCAGGCGGTCAGGATCTCTATGTCAGATTGGCAGCTGCTGATATAGGATCTTCTAGCTCCAACAAGAATCATAGAGCAGTTCTGGCTATTGGCATCACACTTAGTGCACTTGTTTTAGTTTTGGGATTGGTTGCTATTTGTTACTTAAGGAAGAAGAGACAACAAAGTTCTAGAGGTGACCAAAGGAACATGGATGATCTAAAATTGCCAATGTTTAATTTTGATACCTTAATGATGGCTACAAACAATTTCTCTCAAGATAATAAACTTGGAGAAGGAGGCTTCGGTAGTGTTTATAGGGGTAGATTGATTGAAGGTCAAGAAATTGCTGTAAAAAGGTTATCAGAAAATTCTGGACAAGGAATTAACGAATTTAAAAATGAAATCAAATTAATTGCCAAACTCCAACATCGAAATCTAGTCCGATTACTTGGTTGCTGCATTGAGAAGAATGAAAAGATGGTGGTCTATGAATATATGAAAAATAGAGGACTTGATTCCATTTTGTTTGGTTTGGAGGCGTTGGCACGAAGGAACTATATTGACTTTGATTGA 1791 0.4216 MRVFFTHLNSLIIILISFFFFITSSTSLDTLTGTQILKTNQTLLSENQTFVLGFFRGSNTNYYLGIWYNNISPQTIVWVANRDNPIDNSAGHLKIGDNGNFVLLNSSGNPAWSSNQTNAKNPVIQLLDTGNLLLKDLSDTTNNNYLWQSFEYPTDTLLPGMKVGWNLDTGTEKHLTSWKVEGEDPSSGDYTLKIDYHGLPEALLRRNQTIIYRNGPWNGERFSGIPGMKDNTNDLKYNFTYDEHGVWFSFSVTEPSLLSRIILSSDSDGQYQRYMWIQGRWNKFSYTPKDPCDYYRHCGPYGVCENDASPICTCMQGFRPKNQEAWNLRDGSDGCVRNTVLNCSTDKFLHLENMKLPETSSVFMNKSMTLDECGSLCKRNCSCTAYANIDIRNGGSGCVMWFGQLFDMNVHRPGGQDLYVRLAAADIGSSSSNKNHRAVLAIGITLSALVLVLGLVAICYLRKKRQQSSRGDQRNMDDLKLPMFNFDTLMMATNNFSQDNKLGEGGFGSVYRGRLIEGQEIAVKRLSENSGQGINEFKNEIKLIAKLQHRNLVRLLGCCIEKNEKMVVYEYMKNRGLDSILFGLEALARRNYIDFD 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00505 596 ProSitePatterns Protein kinases ATP-binding region signature. 502 524 IPR017441 GO:0005524
Arst10g00505 596 Gene3D - 23 150 IPR036426 -
Arst10g00505 596 SUPERFAMILY Protein kinase-like (PK-like) 477 585 IPR011009 -
Arst10g00505 596 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 24 150 - -
Arst10g00505 596 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 15 586 - -
Arst10g00505 596 SMART ntp_6 343 422 IPR003609 -
Arst10g00505 596 ProSiteProfiles PAN/Apple domain profile. 343 423 IPR003609 -
Arst10g00505 596 SUPERFAMILY alpha-D-mannose-specific plant lectins 75 219 IPR036426 -
Arst10g00505 596 Gene3D Hepatocyte Growth Factor 338 419 - -
Arst10g00505 596 Pfam PAN-like domain 343 408 IPR003609 -
Arst10g00505 596 Gene3D Phosphorylase Kinase; domain 1 457 571 - -
Arst10g00505 596 CDD PAN_AP_plant 339 423 - -
Arst10g00505 596 SMART blect_4 34 153 IPR001480 -
Arst10g00505 596 Pfam Protein tyrosine and serine/threonine kinase 498 581 IPR001245 GO:0004672|GO:0006468
Arst10g00505 596 ProSiteProfiles EGF-like domain profile. 288 324 IPR000742 -
Arst10g00505 596 CDD B_lectin 34 153 IPR001480 -
Arst10g00505 596 ProSiteProfiles Bulb-type lectin domain profile. 28 147 IPR001480 -
Arst10g00505 596 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 461 571 - -
Arst10g00505 596 Pfam S-locus glycoprotein domain 212 322 IPR000858 GO:0048544
Arst10g00505 596 Pfam D-mannose binding lectin 75 179 IPR001480 -
Arst10g00505 596 ProSiteProfiles Protein kinase domain profile. 496 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00505 Arst-Chr10 4066012 4068998 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00505 433 585 Receptor kinase-like Gene Family AT4G23190 43.312 1.46e-36 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Arst10g00505 S_locus_glycop 4e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00505 - - aip:107621495 983.015