Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00502 ATGAGAATCTTCTTCAACCACCTTAACTACCTCATCATCATTCTTATTATCACTCCACCAGCCTCTTCCGACACTTTAACGGGAAAACAAATCCTCAGAACCAACCAAACGCTATTGTCACAAAACCAAACCTTCGTGCTGGGCTTCTTCAGAGGTTCCAACACCAACTATTACCTCGGAATATGGTACAACAACATCAATCCTCAAACAATAGTTTGGGTTGCAAACAGAGACAACCCCATTGACAACTCTACAGGCTATCTCAAGATCGGAGACAAGGGAAACTTTGTTCTTCTCAATTCATCCGGGAACCCCGCATGGTCCTCCAACCAAACCAACGCCATGAATCCAGTTCTCCAGCTCCTCGATACAGGTAATCTTGTTCTCAAGGATTCATCAGACACGACCAATAGTAACTACTTATGGCAGAGCTTCGATTATCCAACCGATACCATGTTACCAGGGATGAAGCTTGGTTGGAACTTGGACACAAGAACAGAGAAGCACTTGACATCATGGAAGGTCGCAGGTGAAGACCCTTCCAGCGGTGACTACACTTTGAAGGTAGATTACCATGGTTTACCAGATATTTTCATCAGGAGAAACCAAACTATAATATTCCGAACTGGTGATTGGAATGGTGAGAGATTCAGTGGGGTCCCAGGAATGGGAGACAACATAAATGAAATCAAGTACAATTTCACTTATGATGAGCACGGTGTGTGGTACTCTTACTCCGTTACAATAGCTTCCTTGTTGTCGAGGTTAATCCTGACATCTGATTCTGATGGCCAGTATCAACGCTACATGTGGATACAAGGAACATGGAGCAAGTTCTCGTACGTACCAGCGTATCAATGCGATTACTACAGAGTGTGTGGTTCGTATGGAGTGTGTGACAATGATGCTTCGCCGATTTGCTCTTGTATGCAGGGGTTCAGGCCTAAGAACCAAGAAGCTTGGAACTTGAGAGATGGGTCTGATGGGTGTGTGAGGAAGACGGTTTTGAATTGTTCGACTGACAAGTTCTTGCATCTTGAGAACATGAAGCTGCCGGAGACAACTAGTGTGTTTGTGAATAAGAGTATGACACTTGATGAATGTGGGAGTTTGTGTAAGAGGAATTGTTCATGCACTGCATATGCAAACATCGACATCACAAATGGAGGAAGTGGCTGTGTTATGTGGCTTGATCAACTCTTTGACATGGTTGTCTTCCCTAAGAATGGCCAAGATCTCTATGTCAGATTGGCCGCTGCTGATATAGGATCTACTAGCTCCAACAAGAATCATAGAGTAGATCTGGCTATTGGCATCACACTTAGTGCACTTGTTTTAGTTTTGGGATTGGTTGCTATTTGTTACTTAAGGAAGAAGAGCAAACAAAAATCAAGAGGTTTTGTCCACAGAAGTCATGAATTCTTAATGAATGAGGTGGTGCCTTCTGTTGAAAGGAACATGGATGATTTAGAGTTGCCAATGTTTGATTTTGATACTTTAACAATGGCTACAAACAATTTCTCTCAAAATAATAAACTTGGAGAAGGAGGCTTCGGTAATGTTCATAAGGGTAGATTGGTTGATGGTCAAGAAATTGCTATAAAAAGATTATCAAAAGACTCTGGACAAGGAATAGAAGAGTTTAAGAATGAAGTCAAGTTAATTGTCAAACTACAACACCGAAATCTTGTTCGGTTGCTTGGTTGCTGCATTGAGAAGGACGAGAAGATATTGGTTTATGAGTATATGGAAAATAGAGGCCTGGATTCCGTTTTGTTTGACAAATCAAAAGGACCTTTGCTTGATTGGAAAAAACGTTTCAATATTATATATGGTATAGCTAAAGGGCTTCTATATTTGCATCAAGATTCAAGATTTCGAATTATTCATAGAGATCTTAAGACAAGTAACATATTACTAGATAGTGAAATGAATCCAAAGATATCAGACTTTGGGATGGCTAGAATTTTTGACGAAGATCAAATGCAAGCAAAAACACGAAGAATTGTTGGAACATATGGTTATATGTCTCCAGAATATGCTATGGACGGAAATTTCTCTGTAAAAACTGATGTTTTTAGTTTTGGAGTTCTAGTATTGGAGATCATAACTGGAAATAAGAATAGAGGGTTTTACATTGATAACGAAGAATTGAATCTTTTGGGAAATGTATGGAGGCATTGGCATGAAGGAACTGTATTGACATTGATTGATCCATCCATTGGCAATTCATACATAAAGTCTGATGTTATAAGATGCTTACATATTGGACTTTTATGTGTTCAAGAACATGCAGAAGATAGACCAACAATGTCTTCAGTGATCTTAATGTTAAATAATGAAGTTCCAGCATTGTCATATCCTAAAAATCCTGGATTTTTCGCAAGAAAAAGTCATCCAGAGACCGATTCATCTTCAAATAAACAAGATGAAGTATGGAGTGTGAATCAAGTCACAACGACAATGTTAGATGCTAGATAA 2481 0.3938 MRIFFNHLNYLIIILIITPPASSDTLTGKQILRTNQTLLSQNQTFVLGFFRGSNTNYYLGIWYNNINPQTIVWVANRDNPIDNSTGYLKIGDKGNFVLLNSSGNPAWSSNQTNAMNPVLQLLDTGNLVLKDSSDTTNSNYLWQSFDYPTDTMLPGMKLGWNLDTRTEKHLTSWKVAGEDPSSGDYTLKVDYHGLPDIFIRRNQTIIFRTGDWNGERFSGVPGMGDNINEIKYNFTYDEHGVWYSYSVTIASLLSRLILTSDSDGQYQRYMWIQGTWSKFSYVPAYQCDYYRVCGSYGVCDNDASPICSCMQGFRPKNQEAWNLRDGSDGCVRKTVLNCSTDKFLHLENMKLPETTSVFVNKSMTLDECGSLCKRNCSCTAYANIDITNGGSGCVMWLDQLFDMVVFPKNGQDLYVRLAAADIGSTSSNKNHRVDLAIGITLSALVLVLGLVAICYLRKKSKQKSRGFVHRSHEFLMNEVVPSVERNMDDLELPMFDFDTLTMATNNFSQNNKLGEGGFGNVHKGRLVDGQEIAIKRLSKDSGQGIEEFKNEVKLIVKLQHRNLVRLLGCCIEKDEKILVYEYMENRGLDSVLFDKSKGPLLDWKKRFNIIYGIAKGLLYLHQDSRFRIIHRDLKTSNILLDSEMNPKISDFGMARIFDEDQMQAKTRRIVGTYGYMSPEYAMDGNFSVKTDVFSFGVLVLEIITGNKNRGFYIDNEELNLLGNVWRHWHEGTVLTLIDPSIGNSYIKSDVIRCLHIGLLCVQEHAEDRPTMSSVILMLNNEVPALSYPKNPGFFARKSHPETDSSSNKQDEVWSVNQVTTTMLDAR 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00502 826 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 583 786 - -
Arst10g00502 826 ProSitePatterns Serine/Threonine protein kinases active-site signature. 628 640 IPR008271 GO:0004672|GO:0006468
Arst10g00502 826 Pfam Protein tyrosine and serine/threonine kinase 509 775 IPR001245 GO:0004672|GO:0006468
Arst10g00502 826 SUPERFAMILY Protein kinase-like (PK-like) 492 807 IPR011009 -
Arst10g00502 826 SMART serkin_6 507 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g00502 826 ProSitePatterns Protein kinases ATP-binding region signature. 513 535 IPR017441 GO:0005524
Arst10g00502 826 Gene3D Phosphorylase Kinase; domain 1 482 582 - -
Arst10g00502 826 CDD PAN_AP_plant 334 418 - -
Arst10g00502 826 ProSiteProfiles PAN/Apple domain profile. 338 418 IPR003609 -
Arst10g00502 826 Gene3D - 19 145 IPR036426 -
Arst10g00502 826 ProSiteProfiles Bulb-type lectin domain profile. 23 142 IPR001480 -
Arst10g00502 826 CDD B_lectin 30 148 IPR001480 -
Arst10g00502 826 Pfam Domain of unknown function (DUF3403) 785 826 IPR021820 GO:0004674
Arst10g00502 826 CDD STKc_IRAK 513 780 - -
Arst10g00502 826 Gene3D Hepatocyte Growth Factor 334 416 - -
Arst10g00502 826 Gene3D Transferase(Phosphotransferase) domain 1 583 785 - -
Arst10g00502 826 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 145 - -
Arst10g00502 826 SMART blect_4 29 148 IPR001480 -
Arst10g00502 826 SUPERFAMILY alpha-D-mannose-specific plant lectins 70 214 IPR036426 -
Arst10g00502 826 ProSiteProfiles Protein kinase domain profile. 507 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g00502 826 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 472 582 - -
Arst10g00502 826 Pfam S-locus glycoprotein domain 207 317 IPR000858 GO:0048544
Arst10g00502 826 Pfam D-mannose binding lectin 70 174 IPR001480 -
Arst10g00502 826 SMART ntp_6 338 417 IPR003609 -
Arst10g00502 826 Pfam PAN-like domain 338 403 IPR003609 -
Arst10g00502 826 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 12 769 - -
Arst10g00502 826 PIRSF SRK 1 826 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00502 Arst-Chr10 3979962 3983477 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00502 495 793 Receptor kinase-like Gene Family AT4G11530 61.667 2.37e-128 398
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Arst10g00502 PK_Tyr_Ser-Thr 6.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00502 - - aip:107621495 1313.52