Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00500 ATGAAGATCGGTTGGAATTTGGACACAGGAACGGAGAAGCATTTAACATCATGGAAGATCAAGGGTGAAGACCCTTCAAGCGGTGACTACACTTTGAAGATAGATTACCATGGTTTACCTGAGGCTTTCCTCAGGAGAAACCAAACTATAATATTCCGAACTGGTCCTTGGAATGGTGAGAGATTCAGTGGGGTCCCTGAGATGAAAAACAACACCGGTCTCGACTTCAATTTCTCTTATGATGAGCATGGCGTGTGGTACTCTTTTTCCGTTACAAAACTTTCCTTGTTGTCGAGGGTAATTGTGACATCTGATTCTGATGGCAAGGCGCTTCAACGCTACATGTTGATACAAGGAAGTTGGAACAAGTTCTGGTACGAACCAGCTGATGAATGCGATTACTATAGACAGTGTGGTCCATATGCAGTGTGTGACAAGAATGCTTCACCGATTTGCAAGTGTATGCAGGGGTTCAGGCCTAAGAACCAAGAAGCTTGGAACATGAGAGATGGATCTGATGGGTGTGTGAGGAACACGGTTTTGAATTGTTCGACTGACAAGTTCTTGCATCTTGAGAACATGAAGCTGCCGGAGACGAGCAGTGTGTTTATGAATAAGAGTATGACACTTGATGAATGTGGGAGTTTGTGTAAGAGGAATTGTTCATGCACTGCATATGCAAACATCGATATCAGAAATGGAGGAAGTGGCTGTGTCATGTGGCTTGATCAACTCATTGACATGAGTGTCTTCGCTACCTATGGCCAAGATCTCTTTGTCAGATTGGCAGCTGCTGATATAGGATCTACTAGCTCCAACAAGAATCATAGAGTAGTTCTGGCTACTGGTATCTCACTTTGTGCACTTGTTTTAGTTTTGGGATTGGTCGCTATTTGTTACTTAAAGAAGAAGACAAAACAAAAATCAAGAGGTGATGAAAGGAACATGGATGATCTGGAATTGCCAATGTTTAATTTTGATACCTTAATGATGGCTACAAACAATTTCTCTCAAGATAATAAACTTGGAGAAGGAGGCTTCGGTAGTGTTTATAGGGGCAGATTGATTGAAGGCCAAGAAATTGCTGTAAAAAGATTGTCAGAAGACTCTAGACAAGGAGTTACAGAGTTTGAAAATGAAGTCAAATTAATGGTCAAACTTCAACACCGAAATCTTGTTCGATTGCTTGGTTGCTGCATTGAGAAGAATGAGAAAATATTGGTGTATGAATATATGGAAAATAGAGGCCTTGATTCCATTTTATTTGATGAATCAAAAAGTCTCTTGCTTAACTGGGAGAAGCGTTTCAATATTATATATGGAATAGCTAGAGGACTTCTTTATTTGCATCAAGATTCAAGATTTCGAATTATTCATAGAGATCTCAAGACAAGTAATATATTACTAGATATTAAAATGAATCCAAAGATATCAGACTTTGGAATTGCTAGAATTTTTGATAACGATCAAACACAAGCAAAAACAGTAAGAGTTGTTGGAACATATGGTTATATGTCTCCTGAATATATTATGGGTGGAAACTTCTCAGAAAAATCTGATGTTTTTAGCTTTGGAGTTATAATATTAGAAATTATAACTGGAAAGAAGAATAGAAGGTTTTCCAATAATAATGATGAACTGAATCTCTTGGAAAATGTATGGAGACACTGGCATGAAGGAACTATATTGAAATTAATTGATCCATCCATTGGAAATTTATATACAGAATCTGAAATTGTAAGATGCATACATATTGGACTCTTATGTGTTCAAGAATGTCCAGAAGATAGACCAACAATGTCCTTAGTGATCTTATTGTTGAGAAGTGAAGCCCCATCAATGCCAAATCCTAAAATTCCTGGATTTTCAGCAAGAAAAAATTATTCAGAGACTGATTTATCTTCAAGTAAGCAAGATGAATCATGGAGTGTGAATCAAGTCACAGTCACATTATTAAATGCTAGGTAG 1968 0.376 MKIGWNLDTGTEKHLTSWKIKGEDPSSGDYTLKIDYHGLPEAFLRRNQTIIFRTGPWNGERFSGVPEMKNNTGLDFNFSYDEHGVWYSFSVTKLSLLSRVIVTSDSDGKALQRYMLIQGSWNKFWYEPADECDYYRQCGPYAVCDKNASPICKCMQGFRPKNQEAWNMRDGSDGCVRNTVLNCSTDKFLHLENMKLPETSSVFMNKSMTLDECGSLCKRNCSCTAYANIDIRNGGSGCVMWLDQLIDMSVFATYGQDLFVRLAAADIGSTSSNKNHRVVLATGISLCALVLVLGLVAICYLKKKTKQKSRGDERNMDDLELPMFNFDTLMMATNNFSQDNKLGEGGFGSVYRGRLIEGQEIAVKRLSEDSRQGVTEFENEVKLMVKLQHRNLVRLLGCCIEKNEKILVYEYMENRGLDSILFDESKSLLLNWEKRFNIIYGIARGLLYLHQDSRFRIIHRDLKTSNILLDIKMNPKISDFGIARIFDNDQTQAKTVRVVGTYGYMSPEYIMGGNFSEKSDVFSFGVIILEIITGKKNRRFSNNNDELNLLENVWRHWHEGTILKLIDPSIGNLYTESEIVRCIHIGLLCVQECPEDRPTMSLVILLLRSEAPSMPNPKIPGFSARKNYSETDLSSSKQDESWSVNQVTVTLLNAR 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00500 655 Pfam Protein kinase domain 337 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g00500 655 ProSitePatterns Protein kinases ATP-binding region signature. 342 364 IPR017441 GO:0005524
Arst10g00500 655 Pfam S-locus glycoprotein domain 52 162 IPR000858 GO:0048544
Arst10g00500 655 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 300 411 - -
Arst10g00500 655 ProSiteProfiles PAN/Apple domain profile. 183 263 IPR003609 -
Arst10g00500 655 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 412 615 - -
Arst10g00500 655 CDD PAN_AP_plant 179 263 - -
Arst10g00500 655 CDD STKc_IRAK 342 604 - -
Arst10g00500 655 Gene3D Transferase(Phosphotransferase) domain 1 412 615 - -
Arst10g00500 655 SMART ntp_6 183 262 IPR003609 -
Arst10g00500 655 ProSiteProfiles Protein kinase domain profile. 336 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g00500 655 Pfam PAN-like domain 183 248 IPR003609 -
Arst10g00500 655 Gene3D Hepatocyte Growth Factor 178 259 - -
Arst10g00500 655 ProSitePatterns Serine/Threonine protein kinases active-site signature. 457 469 IPR008271 GO:0004672|GO:0006468
Arst10g00500 655 Gene3D Phosphorylase Kinase; domain 1 297 411 - -
Arst10g00500 655 SUPERFAMILY Protein kinase-like (PK-like) 319 605 IPR011009 -
Arst10g00500 655 SMART serkin_6 336 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g00500 655 Pfam Domain of unknown function (DUF3403) 609 655 IPR021820 GO:0004674
Arst10g00500 655 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 65 631 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00500 Arst-Chr10 3952495 3958821 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00500 289 655 Receptor kinase-like Gene Family AT4G23150 51.064 4.00e-126 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Arst10g00500 Pkinase 1.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00500 - - aip:107621495 1275