Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00498 ATGAGAGTCTTCTTCACTTACCTTAACTACCACTTCATCTTTGTTATTAGCTTCTTCTTCGTCACTCCATCAACCGCTTCTGATACTTTAACCGCCACACAAATCCTCACAACTAACCAAACGCTATTATCACAAAACCGATCCTTCGTGCTGGGCTTCTTCAGAGATTCCAACACCAACTATTACCTCGGAATATGGTACAACAACATCAGTCCTCAAACAATAGTTTGGACTGCAAACAGAGACAACCCCATCGACAATAGTTCAGGCTATCTCAAGATCGGAGACAACGGAAGCTTTGTCCTCCTCAATTCATCCGGGAACCCCGCATGGTCCTCCAATCAAACCAACTCCAAGAATCCAGTTCTCCATCTCCTCGATACAGGTAACCTTGTTCTCAAGGATTCATCAGACAAGACCAATAATAACTACTTATGGCAGAGCTTCGATTACCCAACGGATACCTTGTTACCGGGGATGAAGGTCGGTTGGAACCTGGATACAGGAACGGAGAAGCACTTAACATCATGGAAGGTCGAAGGTGAAGACCCTTCAAGCGGTGACTACACTTTGAAGATAGATTACCATGGTTTACCTGAGGGCTTCCTCAGGAGAAACCAAACTATAACATACCGAACTGGTCCTTGGAATGGTGAGAGATTCAGTGGGATCCCAGGGATGAAAGACGACACCAATGATCTCAAGTACAATTTCACTTATGATGAGCATGGGGTGTGGTTCTCTTTCTCCGTTACAGACCCTTCCTTGTTGTCAAGGATAATTCTGTCATCTGATTCTGATGGCCAGTATCAACGCTACATGTGGATACAAGGAAGATGGAACAAGTTCTCCTACGCACCAAAGGATCAATGCGATTTCTATGGAGTGTGTGGTTCCTATGGAGTTTGTGATAATAATGCTTCGCCGGTATGCTCTTGTATTCAGGGGTTCAGACCAAAGAACCAAGAAGCTTGGAACTTGAGAGATGGATCTGATGGATGTGTGAGGAACACGGGTTTGAATTGTTCCACTGACAAGTTCTTGCGTCTTGAGCACATGAAGCTGCCGGATACAACGAACGTGTTTGTGAATAAGAGTATGACACTTGATGAATGTGGGAGTTTGTGCAAGAGGAATTGTTCATGCACTGCATATGCAAACATTGATATCAGAAATGGAGGAAGTGGCTGTGTTATGTGGCTTGGCCAACTCTTTGACATGAATGTCCACCGTACAGACGGTCAAGATCTCTATGTCAGATTGGCAGCTGCTGATATAGGATCTACTAGCTCCAACAAGAATCATAGAGCAGTTCTGGCTATTGGCATTACAGTTTGTGCACTTGTTTTAGTTTTGGGATTGGTTGCTGTTTGTTACTTAAGGAAGAAGAGACAACAAAGTTCTAGAGGTTTTGTCCACAGAAGTCATGATAGTTTGATGAATGAGGTGGTGTCTTCTAGAGGATACTTAGGTGATGAAAGGAACATGGATGATATAGAGCTGCCATTGTTTGATTGTGATACCTTAACAATGGCTACGAACAATTTCTCTCAAGATAATAAACTTGGAGAAGGAGGCTTCGGTAGTGTTTATATGGGTAGATTGATTGAAGGTCAAAAAATTGCTGTGAAGAGATTATCAAAATATTCTGGACAAGGAATTGAGGAGTTTAAGAATGAAGTCAAGCTAATTGTCAAACTCCAACATCGAAATCTTGTTCGATTGCTTGGTTGCTGTATTGAAAATGATGAAAAGATGTTGGTGTATGAGTATATGGAAAATAGAGGCCTTGATTCCATTTTGTTTGACAAATCAGAAAGTAGAGTCTTGCTTGACTGGGAAAGGCGTTTTAATATTATATATGGAATAGCTAGAGGACTTCTTTACTTGCATCAAGATTCAAGATTTCGAATTATTCATAGAGATCTTAAGATAAGTAATATATTACTAGATAGTGAAATGATTCCCAAGATATCAGATTTTGGAATGGCAAGAATATTTGACAAAGATCAAACACAAGCAAAAACATTAAGAGTTGTTGGAACATATGGTTATATGTCTCCTGAATATGCTATGGACGGAAACTTTTCAGTAAAATCTGATGTTTTTAGTTTTGGTGTTATGGTATTGGAGATCATAACTGGAAAGAAGAATAGAGAGTTTTATAGTGATAACGATGAATTGAATCTTTTGGGAAATGTATGGAGACATTGGCATGAAGGAACTGCATTGACACTTCTTGATCCATCAATCGGCAATTCATACACAGAAGCTGAAGTTGTAAGATGCATACATATTGGGCTCTTATGTGTCCAAGAACATGCAGAAGATAGACCAACAATGTCTTCGGTGATCTTAATGTTAAGTAGTGAAACTCCATCTTTACCAAATCCTAAAACTCCTGGATTTTCCATAAAGAAAAATCATCCAAAGACTGAGTCATCTTCAAGTAGTGTAAATCAAGTTACCGTCACAATGTTAGATGCTAGGTAG 2493 0.4003 MRVFFTYLNYHFIFVISFFFVTPSTASDTLTATQILTTNQTLLSQNRSFVLGFFRDSNTNYYLGIWYNNISPQTIVWTANRDNPIDNSSGYLKIGDNGSFVLLNSSGNPAWSSNQTNSKNPVLHLLDTGNLVLKDSSDKTNNNYLWQSFDYPTDTLLPGMKVGWNLDTGTEKHLTSWKVEGEDPSSGDYTLKIDYHGLPEGFLRRNQTITYRTGPWNGERFSGIPGMKDDTNDLKYNFTYDEHGVWFSFSVTDPSLLSRIILSSDSDGQYQRYMWIQGRWNKFSYAPKDQCDFYGVCGSYGVCDNNASPVCSCIQGFRPKNQEAWNLRDGSDGCVRNTGLNCSTDKFLRLEHMKLPDTTNVFVNKSMTLDECGSLCKRNCSCTAYANIDIRNGGSGCVMWLGQLFDMNVHRTDGQDLYVRLAAADIGSTSSNKNHRAVLAIGITVCALVLVLGLVAVCYLRKKRQQSSRGFVHRSHDSLMNEVVSSRGYLGDERNMDDIELPLFDCDTLTMATNNFSQDNKLGEGGFGSVYMGRLIEGQKIAVKRLSKYSGQGIEEFKNEVKLIVKLQHRNLVRLLGCCIENDEKMLVYEYMENRGLDSILFDKSESRVLLDWERRFNIIYGIARGLLYLHQDSRFRIIHRDLKISNILLDSEMIPKISDFGMARIFDKDQTQAKTLRVVGTYGYMSPEYAMDGNFSVKSDVFSFGVMVLEIITGKKNREFYSDNDELNLLGNVWRHWHEGTALTLLDPSIGNSYTEAEVVRCIHIGLLCVQEHAEDRPTMSSVILMLSSETPSLPNPKTPGFSIKKNHPKTESSSSSVNQVTVTMLDAR 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00498 830 ProSiteProfiles Bulb-type lectin domain profile. 27 146 IPR001480 -
Arst10g00498 830 Pfam Receptor serine/threonine kinase 473 504 IPR022126 GO:0004674
Arst10g00498 830 SUPERFAMILY Protein kinase-like (PK-like) 501 816 IPR011009 -
Arst10g00498 830 SMART ntp_6 342 421 IPR003609 -
Arst10g00498 830 CDD B_lectin 33 152 IPR001480 -
Arst10g00498 830 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 12 779 - -
Arst10g00498 830 ProSiteProfiles PAN/Apple domain profile. 342 422 IPR003609 -
Arst10g00498 830 ProSiteProfiles Protein kinase domain profile. 516 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g00498 830 Gene3D Phosphorylase Kinase; domain 1 491 591 - -
Arst10g00498 830 SMART serkin_6 516 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g00498 830 SMART blect_4 33 152 IPR001480 -
Arst10g00498 830 Pfam Domain of unknown function (DUF3403) 790 830 IPR021820 GO:0004674
Arst10g00498 830 MobiDBLite consensus disorder prediction 793 830 - -
Arst10g00498 830 PIRSF SRK 1 830 IPR024171 GO:0004674
Arst10g00498 830 Pfam Protein tyrosine and serine/threonine kinase 518 785 IPR001245 GO:0004672|GO:0006468
Arst10g00498 830 Pfam S-locus glycoprotein domain 211 321 IPR000858 GO:0048544
Arst10g00498 830 Pfam PAN-like domain 342 407 IPR003609 -
Arst10g00498 830 ProSitePatterns Protein kinases ATP-binding region signature. 522 544 IPR017441 GO:0005524
Arst10g00498 830 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 22 149 - -
Arst10g00498 830 CDD STKc_IRAK 522 788 - -
Arst10g00498 830 Pfam D-mannose binding lectin 74 178 IPR001480 -
Arst10g00498 830 CDD PAN_AP_plant 340 422 - -
Arst10g00498 830 ProSitePatterns Serine/Threonine protein kinases active-site signature. 638 650 IPR008271 GO:0004672|GO:0006468
Arst10g00498 830 Gene3D Hepatocyte Growth Factor 340 422 - -
Arst10g00498 830 SUPERFAMILY alpha-D-mannose-specific plant lectins 60 217 IPR036426 -
Arst10g00498 830 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 482 591 - -
Arst10g00498 830 Gene3D - 22 149 IPR036426 -
Arst10g00498 830 Gene3D Transferase(Phosphotransferase) domain 1 592 796 - -
Arst10g00498 830 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 592 796 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00498 Arst-Chr10 3935794 3939079 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00498 438 806 Receptor kinase-like Gene Family AT4G05200 53.117 1.84e-125 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Arst10g00498 PK_Tyr_Ser-Thr 3.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00498 - - aip:107621495 1338.55