Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00497 ATGAGAGTCTTCTTCACTTACCTTAACTACCACTTCATCTTTGTTATTAGCTTCTTCTTCGTCACTCCATCAACCGCTTCTGATACTTTAACCGCCACACAAATCCTCACAACTAACCAAACGCTATTATCACAAAACCGATCCTTCGTGCTGGGCTTCTTCAGAGATTCCAACACCAACTATTACCTCGGAATATGGTACAACAACATCAGTCCTCAAACAATAGTTTGGACTGCAAACAGAGACAACCCCATCGACAATAGTTCAGGCTATCTCAAGATCGGAGACAACGGAAGCTTTGTCCTCCTCAATTCATCCGGGAACCCCGCATGGTCCTCCAATCAAACCAACTCCAAGAATCCAGTTCTCCATCTCCTCGATACAGGTAACCTTGTTCTCAAGGATTCATCAGACAAGACCAATAATAACTACTTATGGCAGAGCTTCGATTACCCAACGGATACCTTGTTACCGGGGATGAAGGTCGGTTGGAACCTGGATACAGGAACGGAGAAGCACTTAACATCATGGAAGGTCGAAGGTGAAGACCCTTCAAGCGGTGACTACACTTTGAAGATAGATTACCATGGTTTACCTGAGGGCTTCCTCAGGAGAAACCAAACTATAACATACCGAACTGGTCCTTGGAATGGTGAGAGATTCAGTGGGATCCCAGGGATGAAAGACGACACCAATGATCTCAAGTACAATTTCACTTATGATGAGCATGGGGTGTGGTTCTCTTTCTCCGTTACAGACCCTTCCTTGTTGTCAAGGATAATTCTGTCATCTGATTCTGATGGCCAGTATCAACGCTACATGTGGATACAAGGAAGATGGAACAAGTTCTCCTACGCACCAAAGGATCAATGCGATTTCTATGGAGTGTGTGGTTCCTATGGAGTTTGTGATAATAATGCTTCGCCGGTATGCTCTTGTATTCAGGGGTTCAGACCAAAGAACCAAGAAGCTTGGAACTTGAGAGATGGATCTGATGGATGTGTGAGGAACACGGGTTTGAATTGTTCCACTGACAAGTTCTTGCGTCTTGAGCACATGAAGCTGCCGGATACAACGAACGTGTTTGTGAATAAGAGTATGACACTTGATGAATGTGGGAGTTTGTGCAAGAGGAATTGTTCATGCACTGCATATGCAAACATTGATATCAGAAATGGAGGAAGTGGCTGTGTTATGTGGCTTGGCCAACTCTTTGACATGAATGTCCACCGTACAGACGGTCAAGATCTCTATGTCAGATTGGCAGCTGCTGATATAGGATCTACTAGCTCCAACAAGAATCATAGAGCAGTTCTGGCTATTGGCATTACAGTTTGTGCACTTGTTTTAGTTTTGGGATTGGTTGCTGTTTGTTACTTAAGGAAGAAGAGACAACAAAGTTCTAGAGCCACTATTTCAGGTTTTGTCCACAGAAGTCATGATAGTTTGATGAATGAGGTGGTGTCTTCTAGAGGATACTTAGGTGATGAAAGGAACATGGATGATATAGAGCTGCCATTGTTTGATTGTGATACCTTAACAATGGCTACGAACAATTTCTCTCAAGATAATAAACTTGGAGAAGGAGGCTTCGGTAGTGTTTATATGGGTAGATTGATTGAAGGTCAAAAAATTGCTGTGAAGAGATTATCAAAATATTCTGGACAAGGAATTGAGGAGTTTAAGAATGAAGTCAAGCTAATTGTCAAACTCCAACATCGAAATCTTGTTCGATTGCTTGGTTGCTGTATTGAAAATGATGAAAAGATGTTGGTGTATGAGTATATGGAAAATAGAGGCCTTGATTCCATTTTGTTTGACAAATCAGAAAGTAGAGTCTTGCTTGACTGGGAAAGGCGTTTTAATATTATATATGGAATAGCTAGAGGACTTCTTTACTTGCATCAAGATTCAAGATTTCGAATTATTCATAGAGATCTTAAGATAAGTAATATATTACTAGATAGTGAAATGATTCCCAAGATATCAGATTTTGGAATGGCAAGAATATTTGACAAAGATCAAACACAAGCAAAAACATTAAGAGTTGTTGGAACATATGGTTATATGTCTCCTGAATATGCTATGGACGGAAACTTTTCAGTAAAATCTGATGTTTTTAGTTTTGGTGTTATGGTATTGGAGATCATAACTGGAAAGAAGAATAGAGAGTTTTATAGTGATAACGATGAATTGAATCTTTTGGGAAATGTATGGAGACATTGGCATGAAGGAACTGCATTGACACTTCTTGATCCATCAATCGGCAATTCATACACAGAAGCTGAAGTTGTAAGATGCATACATATTGGGCTCTTATGTGTCCAAGAACATGCAGAAGATAGACCAACAATGTCTTCGGTGATCTTAATGTTAAGTAGTGAAACTCCATCTTTACCAAATCCTAAAACTCCTGGATTTTCCATAAAGAAAAATCATCCAAAGACTGAGTCATCTTCAAGTAGTGTAAATCAAGTTACCGTCACAATGTTAGATGCTAGGTAG 2505 0.4004 MRVFFTYLNYHFIFVISFFFVTPSTASDTLTATQILTTNQTLLSQNRSFVLGFFRDSNTNYYLGIWYNNISPQTIVWTANRDNPIDNSSGYLKIGDNGSFVLLNSSGNPAWSSNQTNSKNPVLHLLDTGNLVLKDSSDKTNNNYLWQSFDYPTDTLLPGMKVGWNLDTGTEKHLTSWKVEGEDPSSGDYTLKIDYHGLPEGFLRRNQTITYRTGPWNGERFSGIPGMKDDTNDLKYNFTYDEHGVWFSFSVTDPSLLSRIILSSDSDGQYQRYMWIQGRWNKFSYAPKDQCDFYGVCGSYGVCDNNASPVCSCIQGFRPKNQEAWNLRDGSDGCVRNTGLNCSTDKFLRLEHMKLPDTTNVFVNKSMTLDECGSLCKRNCSCTAYANIDIRNGGSGCVMWLGQLFDMNVHRTDGQDLYVRLAAADIGSTSSNKNHRAVLAIGITVCALVLVLGLVAVCYLRKKRQQSSRATISGFVHRSHDSLMNEVVSSRGYLGDERNMDDIELPLFDCDTLTMATNNFSQDNKLGEGGFGSVYMGRLIEGQKIAVKRLSKYSGQGIEEFKNEVKLIVKLQHRNLVRLLGCCIENDEKMLVYEYMENRGLDSILFDKSESRVLLDWERRFNIIYGIARGLLYLHQDSRFRIIHRDLKISNILLDSEMIPKISDFGMARIFDKDQTQAKTLRVVGTYGYMSPEYAMDGNFSVKSDVFSFGVMVLEIITGKKNREFYSDNDELNLLGNVWRHWHEGTALTLLDPSIGNSYTEAEVVRCIHIGLLCVQEHAEDRPTMSSVILMLSSETPSLPNPKTPGFSIKKNHPKTESSSSSVNQVTVTMLDAR 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00497 834 ProSiteProfiles Bulb-type lectin domain profile. 27 146 IPR001480 -
Arst10g00497 834 Pfam Receptor serine/threonine kinase 477 508 IPR022126 GO:0004674
Arst10g00497 834 SMART ntp_6 342 421 IPR003609 -
Arst10g00497 834 CDD B_lectin 33 152 IPR001480 -
Arst10g00497 834 Gene3D Transferase(Phosphotransferase) domain 1 596 800 - -
Arst10g00497 834 Gene3D Hepatocyte Growth Factor 340 422 - -
Arst10g00497 834 ProSiteProfiles Protein kinase domain profile. 520 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g00497 834 Pfam S-locus glycoprotein domain 211 321 IPR000858 GO:0048544
Arst10g00497 834 ProSiteProfiles PAN/Apple domain profile. 342 422 IPR003609 -
Arst10g00497 834 Pfam Protein tyrosine and serine/threonine kinase 522 789 IPR001245 GO:0004672|GO:0006468
Arst10g00497 834 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 596 800 - -
Arst10g00497 834 SMART blect_4 33 152 IPR001480 -
Arst10g00497 834 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 22 149 - -
Arst10g00497 834 ProSitePatterns Protein kinases ATP-binding region signature. 526 548 IPR017441 GO:0005524
Arst10g00497 834 ProSitePatterns Serine/Threonine protein kinases active-site signature. 642 654 IPR008271 GO:0004672|GO:0006468
Arst10g00497 834 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 486 595 - -
Arst10g00497 834 SUPERFAMILY Protein kinase-like (PK-like) 505 820 IPR011009 -
Arst10g00497 834 Gene3D Phosphorylase Kinase; domain 1 495 595 - -
Arst10g00497 834 Pfam Domain of unknown function (DUF3403) 794 834 IPR021820 GO:0004674
Arst10g00497 834 CDD STKc_IRAK 526 792 - -
Arst10g00497 834 Pfam PAN-like domain 342 407 IPR003609 -
Arst10g00497 834 SMART serkin_6 520 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g00497 834 MobiDBLite consensus disorder prediction 797 834 - -
Arst10g00497 834 Pfam D-mannose binding lectin 74 178 IPR001480 -
Arst10g00497 834 CDD PAN_AP_plant 340 422 - -
Arst10g00497 834 SUPERFAMILY alpha-D-mannose-specific plant lectins 60 217 IPR036426 -
Arst10g00497 834 Gene3D - 22 149 IPR036426 -
Arst10g00497 834 PIRSF SRK 1 834 IPR024171 GO:0004674
Arst10g00497 834 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 12 783 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00497 Arst-Chr10 3935794 3939079 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00497 438 810 Receptor kinase-like Gene Family AT4G05200 52.547 5.35e-125 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Arst10g00497 PK_Tyr_Ser-Thr 3.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00497 - - aip:107621495 1337.01