Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00493 ATGAATGAGGTGGTGTCTTCTAGAGGATACTTAGGTGATGAAAGGAACATGGATGATATAGAGCTGCCATTGTTTGATTGTGATACCTTAACAATGGCTACGAACAATTTCTCTCAAGATAATAAACTTGGAGAAGGAGGCTTCGGTAGTGTTTATATGGGTAGATTGATTGAAGGTCAAAAAATTGCTGTGAAGAGATTATCAAAATATTCTGGACAAGGAATTGAGGAGTTTAAGAATGAAGTCAAGCTAATTGTCAAACTCCAACATCGAAATCTTGTTCGATTGCTTGGTTGCTGTATTGAAAATGATGAAAAGATGTTGGTGTATGAGTATATGGAAAATAGAGGCCTTGATTCCATTTTGTTTGACAAATCAGAAAGTAGAGTCTTGCTTGACTGGGAAAGGCGTTTTAATATTATATATGGAATAGCTAGAGGACTTCTTTACTTGCATCAAGATTCAAGATTTCGAATTATTCATAGAGATCTTAAGATAAGTAATATATTACTAGATAGTGAAATGATTCCCAAGATATCAGATTTTGGAATGGCAAGAATATTTGACAAAGATCAAACACAAGCAAAAACATTAAGAGTTGTTGGAACATATGGTTATATGTCTCCTGAATATGCTATGGACGGAAACTTTTCAGTAAAATCTGATGTTTTTAGTTTTGGTGTTATGGTATTGGAGATCATAACTGGAAAGAAGAATAGAGAGTTTTATAGTGATAACGATGAATTGAATCTTTTGGGAAATGTATGGAGACATTGGCATGAAGGAACTGCATTGACACTTCTTGATCCATCAATCGGCAATTCATACACAGAAGCTGAAGTTGTAAGATGCATACATATTGGGCTCTTATGTGTCCAAGAACATGCAGAAGATAGACCAACAATGTCTTCGGTGATCTTAATGTTAAGTAGTGAAACTCCATCTTTACCAAATCCTAAAACTCCTGGATTTTCCATAAAGAAAAATCATCCAAAGACTGAGTCATCTTCAAGTAGTGTAAATCAAGTTACCGTCACAATGTTAGATGCTAGGTAG 1056 0.3475 MNEVVSSRGYLGDERNMDDIELPLFDCDTLTMATNNFSQDNKLGEGGFGSVYMGRLIEGQKIAVKRLSKYSGQGIEEFKNEVKLIVKLQHRNLVRLLGCCIENDEKMLVYEYMENRGLDSILFDKSESRVLLDWERRFNIIYGIARGLLYLHQDSRFRIIHRDLKISNILLDSEMIPKISDFGMARIFDKDQTQAKTLRVVGTYGYMSPEYAMDGNFSVKSDVFSFGVMVLEIITGKKNREFYSDNDELNLLGNVWRHWHEGTALTLLDPSIGNSYTEAEVVRCIHIGLLCVQEHAEDRPTMSSVILMLSSETPSLPNPKTPGFSIKKNHPKTESSSSSVNQVTVTMLDAR 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00493 351 Gene3D Phosphorylase Kinase; domain 1 12 112 - -
Arst10g00493 351 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 113 317 - -
Arst10g00493 351 Gene3D Transferase(Phosphotransferase) domain 1 113 317 - -
Arst10g00493 351 ProSitePatterns Serine/Threonine protein kinases active-site signature. 159 171 IPR008271 GO:0004672|GO:0006468
Arst10g00493 351 Pfam Protein tyrosine and serine/threonine kinase 39 306 IPR001245 GO:0004672|GO:0006468
Arst10g00493 351 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 19 351 - -
Arst10g00493 351 SUPERFAMILY Protein kinase-like (PK-like) 22 337 IPR011009 -
Arst10g00493 351 ProSiteProfiles Protein kinase domain profile. 37 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g00493 351 CDD STKc_IRAK 43 309 - -
Arst10g00493 351 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 3 112 - -
Arst10g00493 351 SMART serkin_6 37 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g00493 351 ProSitePatterns Protein kinases ATP-binding region signature. 43 65 IPR017441 GO:0005524
Arst10g00493 351 Pfam Domain of unknown function (DUF3403) 311 351 IPR021820 GO:0004674
Arst10g00493 351 MobiDBLite consensus disorder prediction 314 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00493 Arst-Chr10 3893458 3939079 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00493 25 351 Receptor kinase-like Gene Family AT4G11530 57.101 2.86e-132 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Arst10g00493 PK_Tyr_Ser-Thr 3.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00493 - - aip:107621495 556.214