Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00490 ATGAGGAGAATCTTCTTCCCACACCTTAACTACCTCATCATCATTCTTATTAGCGTCTTCTTCATCACTCTATCAACCTCCTCGGATACTTTAACCGGAACACAAATCCTCACAACCAACCAAACCCTGTTGTCACAAAACCAAACCTTCGTGCTGGGCTTCTTCAGAGTTTCCGACACCAACTATTACCTTGGAATATGGTATAACAACATCAATCCTCAAACAATAGTTTGGGTTGCAAACAGAGACAACCCCATTGATAACTCCACAGGCTATCTTATGATTGGAGACAACGGAAACCTTGTCCTCCTCAATTCATCCGGGAACCCTGCATGGTCCTCCAACCAAACCAACGCCAAGAATCCAGTTCTCCAGCTCCTTGATACTGGTAACCTTGTTCTCAAAGATTCATCAGACAAGATCAGTAGTAGCTACTTATGGCAGAGCTTCGATTACCCAACAGATACCTTGTTACCGGAGATGAAGATCGGTTGGAACTTGGACACAGGAACGGAGAAGCACTTAACATCATGGAAAGTCAAAGGTGAAGACCCTTCAAGCGGTGACTACACTATGAAGGTAGATTACCATGGTTTACCTGAGATTCTCCTCAGCAAAAACCAAACAATAATATGCCGAAGTGGTCCTTGGAATGGTGAGAGATTCAGTGGGCACCCGGCGATGAAAGATAACACCTATGGTCTCAAGTTCAATTTCACTTATGATGTGCACAGTGTGTTTTTCTCTTTTTCCATTACAAAATCTTCCTTGTTGTCTAGAACAATTGTGACATCTGATTCTGATGGTGAGTTTCAACGCTACATGTGGATACAAGGAAGTTGGAACCAGTTCTGGTACCTACCAGCGGATCAATGCGATTACTATGGACAGTGTGGTCCGTATGGAGTGTGTGACAATGATGCTTCGCCAATTTGCACTTGTATGCAGGGGTTCAGGCCTAAGAACCAGGAAGCTTGGAACTTGAGAGATGGGTCTGATGGGTGTGTGAGGAACACGGGTTTGAATTGTTCGACTGATAAGTTCTTGCATCTTGAGAACATGAAGCTGCCGGAGACAAGCAGCGTGTTTATGAATAAGAGTATGACACTTGATGAATGTGGGAGTTTGTGTAAGAGGAATTGTTCATGCACTGCATATGCAAACATCTACATCACAAATGGAGGAAGTGGCTGTGTTATGTGGCTTGGCCAACTCTTTGACATGAGCGTCTACCGTACGGATGGTCAAGATCTCTATGTCAGATTGGCAGCTGCTGATATAGGATCTACTAGCTCCAACAAGAATCATAGAGTAGTACAGGCTGTTGGCATCACACTTAGCGCACTTGTTTTAGTTTTGGGATTGGTTGCTATTTGTTACCTAATGAAGAAGAGTAAACAAAGATCTAGAGCCGCTATTCCAGGTTTTGTCCGCAGAAGTCATGATTGGATAATGAATGAGGTGGTGTTTTCTAGAAAACACTTACGTGATGAAAGGAACATGGATGATCTGGAATTGCCAATGTTTGATTTCGATACCTTAACAATGGCTACAAACAATTTCTCTCAAGATAATAAACTTGGAGAAGGAGGCTTCGGTAGAGTTTATAGAGGAAGATTGATTGAAGGCCAAGAAATTGCTGTGAAGAGATTATCAAAGAAATCTGGACAAGGAAATGAAGAGTTCAAGAATGAAGTCAAGTTAATTGTCAAGCTGCAACACCAAAATCTTGTTCGGTTGCTTGGTTGCTGCATTGAGAAGGATGAGAAGATGTTGGTGTATGAGTATTTGGAAAATAGAGGCCTTGATTCCATTTTATTTGGTAGTATTGTTTATTTCAATATTTTCTTCTTTCTGATTATGATCTATATTTGTTTTACTCTTATCCTTAGTTTATATGTATTAATAATAACTAATGTTGCAGACAAATCGAAAAGACCCTTGCTTGATTGGGAAAGACGTTTCAATATTATCTATGGGATAGCTAAAGGGCTTCTTTATTTGCATCAAGATTCGAGATATCGAATTATTCATAGAGATCTCAAGACAAGTAACATATTATTAGATAATGAAATGAATCCAAAAATATCAGACTTTGGAATCGCTAGAATTTTTGACAAAAATCAAATGCAAGCAAAAACATTAAGAATTGTTGGAACATATGGTTATATGTCTCCTGAATATGCTATGGACGGAAACTTCTCAATAAAATCTGATGTTTTTAGCTTTGGAGTTATGGTATTGGAGATTATAACTGGAAAAAAGAATAGAGAGTTTTACAGTGATAACAATGAATTGAATCTTCTAGGAAATGTATGGAGGCATTGGCATGAAGGAACTGCACTGACACTAATTGATCCATCCATTGGCAATTCATACGCAGAATCTAAAGTTATGAGATGCATACATATTAGTCTCTTATGTGTACAAGAACGTGCAGAAGATAGACCAACAATGTCTTCAGTGATCTTAATGTTGAGTAGTGAAGCTCCATCAATGCCAAAACCTAAAATTCCTGGATTTTCCGCAAGGACAAATTATCCAGACATTGATTCATCTTCAAACAAGCAAAATGATATCTGGAGTGTGAATCAAATCACAATCACAATGTTAGATGCTAGGTAG 2625 0.3928 MRRIFFPHLNYLIIILISVFFITLSTSSDTLTGTQILTTNQTLLSQNQTFVLGFFRVSDTNYYLGIWYNNINPQTIVWVANRDNPIDNSTGYLMIGDNGNLVLLNSSGNPAWSSNQTNAKNPVLQLLDTGNLVLKDSSDKISSSYLWQSFDYPTDTLLPEMKIGWNLDTGTEKHLTSWKVKGEDPSSGDYTMKVDYHGLPEILLSKNQTIICRSGPWNGERFSGHPAMKDNTYGLKFNFTYDVHSVFFSFSITKSSLLSRTIVTSDSDGEFQRYMWIQGSWNQFWYLPADQCDYYGQCGPYGVCDNDASPICTCMQGFRPKNQEAWNLRDGSDGCVRNTGLNCSTDKFLHLENMKLPETSSVFMNKSMTLDECGSLCKRNCSCTAYANIYITNGGSGCVMWLGQLFDMSVYRTDGQDLYVRLAAADIGSTSSNKNHRVVQAVGITLSALVLVLGLVAICYLMKKSKQRSRAAIPGFVRRSHDWIMNEVVFSRKHLRDERNMDDLELPMFDFDTLTMATNNFSQDNKLGEGGFGRVYRGRLIEGQEIAVKRLSKKSGQGNEEFKNEVKLIVKLQHQNLVRLLGCCIEKDEKMLVYEYLENRGLDSILFGSIVYFNIFFFLIMIYICFTLILSLYVLIITNVADKSKRPLLDWERRFNIIYGIAKGLLYLHQDSRYRIIHRDLKTSNILLDNEMNPKISDFGIARIFDKNQMQAKTLRIVGTYGYMSPEYAMDGNFSIKSDVFSFGVMVLEIITGKKNREFYSDNNELNLLGNVWRHWHEGTALTLIDPSIGNSYAESKVMRCIHISLLCVQERAEDRPTMSSVILMLSSEAPSMPKPKIPGFSARTNYPDIDSSSNKQNDIWSVNQITITMLDAR 874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00490 874 Pfam D-mannose binding lectin 75 179 IPR001480 -
Arst10g00490 874 Pfam PAN-like domain 343 408 IPR003609 -
Arst10g00490 874 Gene3D - 23 150 IPR036426 -
Arst10g00490 874 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 632 834 - -
Arst10g00490 874 ProSiteProfiles Protein kinase domain profile. 521 833 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g00490 874 Pfam Receptor serine/threonine kinase 478 511 IPR022126 GO:0004674
Arst10g00490 874 Pfam S-locus glycoprotein domain 213 322 IPR000858 GO:0048544
Arst10g00490 874 PIRSF SRK 637 874 IPR024171 GO:0004674
Arst10g00490 874 PIRSF SRK 1 611 IPR024171 GO:0004674
Arst10g00490 874 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 24 150 - -
Arst10g00490 874 Gene3D Hepatocyte Growth Factor 341 423 - -
Arst10g00490 874 Gene3D Transferase(Phosphotransferase) domain 1 632 835 - -
Arst10g00490 874 ProSiteProfiles EGF-like domain profile. 288 324 IPR000742 -
Arst10g00490 874 Pfam Domain of unknown function (DUF3403) 828 874 IPR021820 GO:0004674
Arst10g00490 874 ProSitePatterns Protein kinases ATP-binding region signature. 527 549 IPR017441 GO:0005524
Arst10g00490 874 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 16 817 - -
Arst10g00490 874 CDD STKc_IRAK 527 826 - -
Arst10g00490 874 CDD PAN_AP_plant 341 423 - -
Arst10g00490 874 ProSiteProfiles PAN/Apple domain profile. 343 423 IPR003609 -
Arst10g00490 874 SMART ntp_6 343 422 IPR003609 -
Arst10g00490 874 ProSitePatterns Serine/Threonine protein kinases active-site signature. 676 688 IPR008271 GO:0004672|GO:0006468
Arst10g00490 874 SMART blect_4 34 153 IPR001480 -
Arst10g00490 874 ProSiteProfiles Bulb-type lectin domain profile. 28 147 IPR001480 -
Arst10g00490 874 SMART serkin_6 521 833 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g00490 874 Gene3D Phosphorylase Kinase; domain 1 495 596 - -
Arst10g00490 874 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 486 596 - -
Arst10g00490 874 Pfam Protein tyrosine and serine/threonine kinase 523 823 IPR001245 GO:0004672|GO:0006468
Arst10g00490 874 SUPERFAMILY alpha-D-mannose-specific plant lectins 61 218 IPR036426 -
Arst10g00490 874 SUPERFAMILY Protein kinase-like (PK-like) 506 847 IPR011009 -
Arst10g00490 874 CDD B_lectin 34 153 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00490 Arst-Chr10 3891029 3895079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00490 508 874 Receptor kinase-like Gene Family AT4G21400 52.561 1.31e-122 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Arst10g00490 PK_Tyr_Ser-Thr 3.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00490 - - aip:107621495 1294.26