Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Arst10g00488 | ATGAGAATCTTCTTCACTCACCTTAACTACTTCATCATCCTTGTTATTAGCTGCTTCTTCTTCTTTATCACTCCATCAACCTCTTTGGATACTTTAACCGGAACTCAAATCCTCACAACCAACCAAACCTTGTTGTCAAAAAACCAAACCTTCGCTCTAGGCTTCTTCAGAGGTTCCAACACCAACTATTACCTCGGAATATGGTATAACAACATCAATCCTCAAACTATAGTTTGGGTTGCAAACAGAGACAACCCCGTTGACAACTCTACCGGCTATCTCAAGATCGGAGACAACGGAAACTTTGTCCTCCTCAATTCATCCGGGAACCCTGCATGGTCCTCCAACCAAACCAGCGCCAAGAATCCTGTTCTCCAGCTCCTCGATACCGGTAACCTTGTTCTCAAAGATTCATCAGACAAGACCAACAATAACTACTTATGGCAGAGCTTTGATTACCCAACGGATACCGTGTTACCGGGGATGAAGATCGGTTGGAACTTGGACACAGGAACGGAGAAGCATTTAACATCATGGAAGGTTACAGGTGAAGACCCTTCAAGCGGTGACTTCACTATTAAGTTAGATTACCATGGTTTACCTGAGGCTTTCCTCAGGAAAAACCAAACTATAATATTCCGAACTGGTCCTTGGAATGGTGAGGGATACAGTGGGATCCCGGCGATGAAAGACAACATCGACGGTCTCAAGTTTAATTTCACTTATGATGAGCACAGTGTGTTGTACTCTTTTTCCATTACAGAACCTTCCTTGTTGCCGAGGATAATTCTGACATCTGATACTGATGGCGAGTTTCAACGCTACATGTGGATACAAGGAAGTTGGAACAAGTTCTGGTATCAACCAGCGGATCAATGCGATTACTATAGACAGTGTGGTCCGTATGGAGTGTGTGACGAGAATGCTTCACCGATTTGCAAGTGTATGCAGGGGTTCAGGCCTAAGAACCAAGAAGCTTGGAACTTGAGAGATGGATCTGATGGGTGTGTGAGGAACACGGCTTTGAATTGTTCCACTGACAAGTTCTTGCATCTTGAGCACACGAAGCTTCCAGAGACAAGCAGCGTGTTTATGAATAAGAGTATGACACTTGATGAATGTGGGAGTTTGTGTAAGAGGAATTGTTCATGCACTGCATATGCAAACATCGATATCAGAAATGGAGGAAGTGGCTGTGTTATGTGGCTTGGTCAACTCGTTGACATGAGAGTCTACAGTACGGATGGCCAAGATCTCTATGTCAGATTAGCAGCTGCTGATATAGGATCTACTAGCTCCAACAAGAATCATAGAGTAGTACAGGCTGTTGGCATCACACTTAGCGCACTTGTTTTAGTTTTGGGATTGGTTGCTATTTGTTACCTAATGAAGAAGAGTAAACAAAGATCTAGAGCCGCTATTCCAGGTTTTGTCCGCAGAAGTCATGATTGGATAATGAATGAGGTGGTGTTTTCTAGAAAACACTTACGTGATGAAAGGAACATGGATGATCTGGAATTGCCAATGTTTGATTTCGATACCTTAACAATGGCTACAAACAATTTCTCTCAAGATAATAAACTTGGAGAAGGAGGCTTCGGTAGAGTTTATAGAGGAAGATTGATTGAAGGCCAAGAAATTGCTGTGAAGAGATTATCAAAGAAATCTGGACAAGGAAATGAAGAGTTCAAGAATGAAGTCAAGTTAATTGTCAAGCTGCAACACCAAAATCTTGTTCGGTTGCTTGGTTGCTGCATTGAGAAGGATGAGAAGATGTTGGTGTATGAGTATTTGGAAAATAGAGGCCTTGATTCCATTTTATTTGGTAGTATTGTTTATTTCAATATTTTCTTCTTTCTGATTATGATCTATATTTGTTTTACTCTTATCCTTAGTTTATATGTATTAATAATAACTAATGTTGCAGACAAATCGAAAAGACCCTTGCTTGATTGGGAAAGACGTTTCAATATTATCTATGGGATAGCTAAAGGGCTTCTTTATTTGCATCAAGATTCGAGATATCGAATTATTCATAGAGATCTCAAGACAAGTAACATATTATTAGATAATGAAATGAATCCAAAAATATCAGACTTTGGAATCGCTAGAATTTTTGACAAAAATCAAATGCAAGCAAAAACATTAAGAATTGTTGGAACATATGGTTATATGTCTCCTGAATATGCTATGGACGGAAACTTCTCAATAAAATCTGATGTTTTTAGCTTTGGAGTTATGGTATTGGAGATTATAACTGGAAAAAAGAATAGAGAGTTTTACAGTGATAACAATGAATTGAATCTTCTAGGAAATGTATGGAGACATTGGCATGAAGGAACTGCATTGACACTTCTTGATCCATCAATCGGCAATTCATACACAGAAGCTGAAGTTGTAAGATGCATACATATTGGGCTCTTATGTGTCCAAGAACATGCAGAAGATAGACCAACAATGTCTTCGGTGATCTTAATGTTAAGTAGTGAAACTCCATCTTTACCAAATCCTAAAACTCCTGGATTTTCCATAAAGAAAAATCATCCAAAGACTGAGTCATCTTCAAGTAGTGTAAATCAAGTTACCGTCACAATGTTAGATGCTAGGTAG | 2610 | 0.3935 | MRIFFTHLNYFIILVISCFFFFITPSTSLDTLTGTQILTTNQTLLSKNQTFALGFFRGSNTNYYLGIWYNNINPQTIVWVANRDNPVDNSTGYLKIGDNGNFVLLNSSGNPAWSSNQTSAKNPVLQLLDTGNLVLKDSSDKTNNNYLWQSFDYPTDTVLPGMKIGWNLDTGTEKHLTSWKVTGEDPSSGDFTIKLDYHGLPEAFLRKNQTIIFRTGPWNGEGYSGIPAMKDNIDGLKFNFTYDEHSVLYSFSITEPSLLPRIILTSDTDGEFQRYMWIQGSWNKFWYQPADQCDYYRQCGPYGVCDENASPICKCMQGFRPKNQEAWNLRDGSDGCVRNTALNCSTDKFLHLEHTKLPETSSVFMNKSMTLDECGSLCKRNCSCTAYANIDIRNGGSGCVMWLGQLVDMRVYSTDGQDLYVRLAAADIGSTSSNKNHRVVQAVGITLSALVLVLGLVAICYLMKKSKQRSRAAIPGFVRRSHDWIMNEVVFSRKHLRDERNMDDLELPMFDFDTLTMATNNFSQDNKLGEGGFGRVYRGRLIEGQEIAVKRLSKKSGQGNEEFKNEVKLIVKLQHQNLVRLLGCCIEKDEKMLVYEYLENRGLDSILFGSIVYFNIFFFLIMIYICFTLILSLYVLIITNVADKSKRPLLDWERRFNIIYGIAKGLLYLHQDSRYRIIHRDLKTSNILLDNEMNPKISDFGIARIFDKNQMQAKTLRIVGTYGYMSPEYAMDGNFSIKSDVFSFGVMVLEIITGKKNREFYSDNNELNLLGNVWRHWHEGTALTLLDPSIGNSYTEAEVVRCIHIGLLCVQEHAEDRPTMSSVILMLSSETPSLPNPKTPGFSIKKNHPKTESSSSSVNQVTVTMLDAR | 869 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Arst10g00488 | 869 | Pfam | Domain of unknown function (DUF3403) | 829 | 869 | IPR021820 | GO:0004674 | |
Arst10g00488 | 869 | SMART | blect_4 | 35 | 154 | IPR001480 | - | |
Arst10g00488 | 869 | Pfam | Receptor serine/threonine kinase | 479 | 512 | IPR022126 | GO:0004674 | |
Arst10g00488 | 869 | SMART | serkin_6 | 522 | 834 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Arst10g00488 | 869 | SMART | ntp_6 | 344 | 423 | IPR003609 | - | |
Arst10g00488 | 869 | CDD | STKc_IRAK | 528 | 827 | - | - | |
Arst10g00488 | 869 | MobiDBLite | consensus disorder prediction | 832 | 869 | - | - | |
Arst10g00488 | 869 | CDD | PAN_AP_plant | 340 | 424 | - | - | |
Arst10g00488 | 869 | PANTHER | BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN | 15 | 818 | - | - | |
Arst10g00488 | 869 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 633 | 835 | - | - | |
Arst10g00488 | 869 | ProSitePatterns | Protein kinases ATP-binding region signature. | 528 | 550 | IPR017441 | GO:0005524 | |
Arst10g00488 | 869 | ProSiteProfiles | Bulb-type lectin domain profile. | 29 | 148 | IPR001480 | - | |
Arst10g00488 | 869 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 677 | 689 | IPR008271 | GO:0004672|GO:0006468 | |
Arst10g00488 | 869 | Gene3D | Transferase(Phosphotransferase) domain 1 | 633 | 835 | - | - | |
Arst10g00488 | 869 | PIRSF | SRK | 638 | 869 | IPR024171 | GO:0004674 | |
Arst10g00488 | 869 | PIRSF | SRK | 1 | 612 | IPR024171 | GO:0004674 | |
Arst10g00488 | 869 | Gene3D | Phosphorylase Kinase; domain 1 | 496 | 597 | - | - | |
Arst10g00488 | 869 | ProSiteProfiles | Protein kinase domain profile. | 522 | 834 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Arst10g00488 | 869 | ProSiteProfiles | PAN/Apple domain profile. | 344 | 424 | IPR003609 | - | |
Arst10g00488 | 869 | CDD | B_lectin | 35 | 154 | IPR001480 | - | |
Arst10g00488 | 869 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 25 | 151 | - | - | |
Arst10g00488 | 869 | Gene3D | Hepatocyte Growth Factor | 340 | 424 | - | - | |
Arst10g00488 | 869 | Pfam | D-mannose binding lectin | 76 | 180 | IPR001480 | - | |
Arst10g00488 | 869 | Pfam | PAN-like domain | 344 | 409 | IPR003609 | - | |
Arst10g00488 | 869 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 62 | 219 | IPR036426 | - | |
Arst10g00488 | 869 | Gene3D | - | 25 | 151 | IPR036426 | - | |
Arst10g00488 | 869 | ProSiteProfiles | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 18 | - | - | |
Arst10g00488 | 869 | Pfam | S-locus glycoprotein domain | 213 | 323 | IPR000858 | GO:0048544 | |
Arst10g00488 | 869 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 487 | 597 | - | - | |
Arst10g00488 | 869 | SUPERFAMILY | Protein kinase-like (PK-like) | 507 | 855 | IPR011009 | - | |
Arst10g00488 | 869 | Pfam | Protein tyrosine and serine/threonine kinase | 524 | 824 | IPR001245 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Arst10g00488 | Arst-Chr10 | 3882581 | 3939081 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Arst10g00488 | 509 | 869 | Receptor kinase-like Gene Family | AT4G21400 | 53.639 | 1.19e-122 | 380 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Arst10g00488 | PK_Tyr_Ser-Thr | 1e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Arst10g00488 | - | - | aip:107621495 | 1380.93 |