Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00488 ATGAGAATCTTCTTCACTCACCTTAACTACTTCATCATCCTTGTTATTAGCTGCTTCTTCTTCTTTATCACTCCATCAACCTCTTTGGATACTTTAACCGGAACTCAAATCCTCACAACCAACCAAACCTTGTTGTCAAAAAACCAAACCTTCGCTCTAGGCTTCTTCAGAGGTTCCAACACCAACTATTACCTCGGAATATGGTATAACAACATCAATCCTCAAACTATAGTTTGGGTTGCAAACAGAGACAACCCCGTTGACAACTCTACCGGCTATCTCAAGATCGGAGACAACGGAAACTTTGTCCTCCTCAATTCATCCGGGAACCCTGCATGGTCCTCCAACCAAACCAGCGCCAAGAATCCTGTTCTCCAGCTCCTCGATACCGGTAACCTTGTTCTCAAAGATTCATCAGACAAGACCAACAATAACTACTTATGGCAGAGCTTTGATTACCCAACGGATACCGTGTTACCGGGGATGAAGATCGGTTGGAACTTGGACACAGGAACGGAGAAGCATTTAACATCATGGAAGGTTACAGGTGAAGACCCTTCAAGCGGTGACTTCACTATTAAGTTAGATTACCATGGTTTACCTGAGGCTTTCCTCAGGAAAAACCAAACTATAATATTCCGAACTGGTCCTTGGAATGGTGAGGGATACAGTGGGATCCCGGCGATGAAAGACAACATCGACGGTCTCAAGTTTAATTTCACTTATGATGAGCACAGTGTGTTGTACTCTTTTTCCATTACAGAACCTTCCTTGTTGCCGAGGATAATTCTGACATCTGATACTGATGGCGAGTTTCAACGCTACATGTGGATACAAGGAAGTTGGAACAAGTTCTGGTATCAACCAGCGGATCAATGCGATTACTATAGACAGTGTGGTCCGTATGGAGTGTGTGACGAGAATGCTTCACCGATTTGCAAGTGTATGCAGGGGTTCAGGCCTAAGAACCAAGAAGCTTGGAACTTGAGAGATGGATCTGATGGGTGTGTGAGGAACACGGCTTTGAATTGTTCCACTGACAAGTTCTTGCATCTTGAGCACACGAAGCTTCCAGAGACAAGCAGCGTGTTTATGAATAAGAGTATGACACTTGATGAATGTGGGAGTTTGTGTAAGAGGAATTGTTCATGCACTGCATATGCAAACATCGATATCAGAAATGGAGGAAGTGGCTGTGTTATGTGGCTTGGTCAACTCGTTGACATGAGAGTCTACAGTACGGATGGCCAAGATCTCTATGTCAGATTAGCAGCTGCTGATATAGGATCTACTAGCTCCAACAAGAATCATAGAGTAGTACAGGCTGTTGGCATCACACTTAGCGCACTTGTTTTAGTTTTGGGATTGGTTGCTATTTGTTACCTAATGAAGAAGAGTAAACAAAGATCTAGAGCCGCTATTCCAGGTTTTGTCCGCAGAAGTCATGATTGGATAATGAATGAGGTGGTGTTTTCTAGAAAACACTTACGTGATGAAAGGAACATGGATGATCTGGAATTGCCAATGTTTGATTTCGATACCTTAACAATGGCTACAAACAATTTCTCTCAAGATAATAAACTTGGAGAAGGAGGCTTCGGTAGAGTTTATAGAGGAAGATTGATTGAAGGCCAAGAAATTGCTGTGAAGAGATTATCAAAGAAATCTGGACAAGGAAATGAAGAGTTCAAGAATGAAGTCAAGTTAATTGTCAAGCTGCAACACCAAAATCTTGTTCGGTTGCTTGGTTGCTGCATTGAGAAGGATGAGAAGATGTTGGTGTATGAGTATTTGGAAAATAGAGGCCTTGATTCCATTTTATTTGGTAGTATTGTTTATTTCAATATTTTCTTCTTTCTGATTATGATCTATATTTGTTTTACTCTTATCCTTAGTTTATATGTATTAATAATAACTAATGTTGCAGACAAATCGAAAAGACCCTTGCTTGATTGGGAAAGACGTTTCAATATTATCTATGGGATAGCTAAAGGGCTTCTTTATTTGCATCAAGATTCGAGATATCGAATTATTCATAGAGATCTCAAGACAAGTAACATATTATTAGATAATGAAATGAATCCAAAAATATCAGACTTTGGAATCGCTAGAATTTTTGACAAAAATCAAATGCAAGCAAAAACATTAAGAATTGTTGGAACATATGGTTATATGTCTCCTGAATATGCTATGGACGGAAACTTCTCAATAAAATCTGATGTTTTTAGCTTTGGAGTTATGGTATTGGAGATTATAACTGGAAAAAAGAATAGAGAGTTTTACAGTGATAACAATGAATTGAATCTTCTAGGAAATGTATGGAGACATTGGCATGAAGGAACTGCATTGACACTTCTTGATCCATCAATCGGCAATTCATACACAGAAGCTGAAGTTGTAAGATGCATACATATTGGGCTCTTATGTGTCCAAGAACATGCAGAAGATAGACCAACAATGTCTTCGGTGATCTTAATGTTAAGTAGTGAAACTCCATCTTTACCAAATCCTAAAACTCCTGGATTTTCCATAAAGAAAAATCATCCAAAGACTGAGTCATCTTCAAGTAGTGTAAATCAAGTTACCGTCACAATGTTAGATGCTAGGTAG 2610 0.3935 MRIFFTHLNYFIILVISCFFFFITPSTSLDTLTGTQILTTNQTLLSKNQTFALGFFRGSNTNYYLGIWYNNINPQTIVWVANRDNPVDNSTGYLKIGDNGNFVLLNSSGNPAWSSNQTSAKNPVLQLLDTGNLVLKDSSDKTNNNYLWQSFDYPTDTVLPGMKIGWNLDTGTEKHLTSWKVTGEDPSSGDFTIKLDYHGLPEAFLRKNQTIIFRTGPWNGEGYSGIPAMKDNIDGLKFNFTYDEHSVLYSFSITEPSLLPRIILTSDTDGEFQRYMWIQGSWNKFWYQPADQCDYYRQCGPYGVCDENASPICKCMQGFRPKNQEAWNLRDGSDGCVRNTALNCSTDKFLHLEHTKLPETSSVFMNKSMTLDECGSLCKRNCSCTAYANIDIRNGGSGCVMWLGQLVDMRVYSTDGQDLYVRLAAADIGSTSSNKNHRVVQAVGITLSALVLVLGLVAICYLMKKSKQRSRAAIPGFVRRSHDWIMNEVVFSRKHLRDERNMDDLELPMFDFDTLTMATNNFSQDNKLGEGGFGRVYRGRLIEGQEIAVKRLSKKSGQGNEEFKNEVKLIVKLQHQNLVRLLGCCIEKDEKMLVYEYLENRGLDSILFGSIVYFNIFFFLIMIYICFTLILSLYVLIITNVADKSKRPLLDWERRFNIIYGIAKGLLYLHQDSRYRIIHRDLKTSNILLDNEMNPKISDFGIARIFDKNQMQAKTLRIVGTYGYMSPEYAMDGNFSIKSDVFSFGVMVLEIITGKKNREFYSDNNELNLLGNVWRHWHEGTALTLLDPSIGNSYTEAEVVRCIHIGLLCVQEHAEDRPTMSSVILMLSSETPSLPNPKTPGFSIKKNHPKTESSSSSVNQVTVTMLDAR 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00488 869 Pfam Domain of unknown function (DUF3403) 829 869 IPR021820 GO:0004674
Arst10g00488 869 SMART blect_4 35 154 IPR001480 -
Arst10g00488 869 Pfam Receptor serine/threonine kinase 479 512 IPR022126 GO:0004674
Arst10g00488 869 SMART serkin_6 522 834 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g00488 869 SMART ntp_6 344 423 IPR003609 -
Arst10g00488 869 CDD STKc_IRAK 528 827 - -
Arst10g00488 869 MobiDBLite consensus disorder prediction 832 869 - -
Arst10g00488 869 CDD PAN_AP_plant 340 424 - -
Arst10g00488 869 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 15 818 - -
Arst10g00488 869 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 633 835 - -
Arst10g00488 869 ProSitePatterns Protein kinases ATP-binding region signature. 528 550 IPR017441 GO:0005524
Arst10g00488 869 ProSiteProfiles Bulb-type lectin domain profile. 29 148 IPR001480 -
Arst10g00488 869 ProSitePatterns Serine/Threonine protein kinases active-site signature. 677 689 IPR008271 GO:0004672|GO:0006468
Arst10g00488 869 Gene3D Transferase(Phosphotransferase) domain 1 633 835 - -
Arst10g00488 869 PIRSF SRK 638 869 IPR024171 GO:0004674
Arst10g00488 869 PIRSF SRK 1 612 IPR024171 GO:0004674
Arst10g00488 869 Gene3D Phosphorylase Kinase; domain 1 496 597 - -
Arst10g00488 869 ProSiteProfiles Protein kinase domain profile. 522 834 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g00488 869 ProSiteProfiles PAN/Apple domain profile. 344 424 IPR003609 -
Arst10g00488 869 CDD B_lectin 35 154 IPR001480 -
Arst10g00488 869 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 25 151 - -
Arst10g00488 869 Gene3D Hepatocyte Growth Factor 340 424 - -
Arst10g00488 869 Pfam D-mannose binding lectin 76 180 IPR001480 -
Arst10g00488 869 Pfam PAN-like domain 344 409 IPR003609 -
Arst10g00488 869 SUPERFAMILY alpha-D-mannose-specific plant lectins 62 219 IPR036426 -
Arst10g00488 869 Gene3D - 25 151 IPR036426 -
Arst10g00488 869 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Arst10g00488 869 Pfam S-locus glycoprotein domain 213 323 IPR000858 GO:0048544
Arst10g00488 869 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 487 597 - -
Arst10g00488 869 SUPERFAMILY Protein kinase-like (PK-like) 507 855 IPR011009 -
Arst10g00488 869 Pfam Protein tyrosine and serine/threonine kinase 524 824 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00488 Arst-Chr10 3882581 3939081 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00488 509 869 Receptor kinase-like Gene Family AT4G21400 53.639 1.19e-122 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Arst10g00488 PK_Tyr_Ser-Thr 1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00488 - - aip:107621495 1380.93