Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00486 ATGAGAATCTTCTTCACTCACCTTAACTACTTCATCATCCTTGTTATTAGCTGCTTCTTCTTCTTTATCACTCCATCAACCTCTTTGGATACTTTAACCGGAACTCAAATCCTCACAACCAACCAAACCTTGTTGTCAAAAAACCAAACCTTCGCTCTAGGCTTCTTCAGAGGTTCCAACACCAACTATTACCTCGGAATATGGTATAACAACATCAATCCTCAAACTATAGTTTGGGTTGCAAACAGAGACAACCCCGTTGACAACTCTACCGGCTATCTCAAGATCGGAGACAACGGAAACTTTGTCCTCCTCAATTCATCCGGGAACCCTGCATGGTCCTCCAACCAAACCAGCGCCAAGAATCCTGTTCTCCAGCTCCTCGATACCGGTAACCTTGTTCTCAAAGATTCATCAGACAAGACCAACAATAACTACTTATGGCAGAGCTTTGATTACCCAACGGATACCGTGTTACCGGGGATGAAGATCGGTTGGAACTTGGACACAGGAACGGAGAAGCATTTAACATCATGGAAGGTTACAGGTGAAGACCCTTCAAGCGGTGACTTCACTATTAAGTTAGATTACCATGGTTTACCTGAGGCTTTCCTCAGGAAAAACCAAACTATAATATTCCGAACTGGTCCTTGGAATGGTGAGGGATACAGTGGGATCCCGGCGATGAAAGACAACATCGACGGTCTCAAGTTTAATTTCACTTATGATGAGCACAGTGTGTTGTACTCTTTTTCCATTACAGAACCTTCCTTGTTGCCGAGGATAATTCTGACATCTGATACTGATGGCGAGTTTCAACGCTACATGTGGATACAAGGAAGTTGGAACAAGTTCTGGTATCAACCAGCGGATCAATGCGATTACTATAGACAGTGTGGTCCGTATGGAGTGTGTGACGAGAATGCTTCACCGATTTGCAAGTGTATGCAGGGGTTCAGGCCTAAGAACCAAGAAGCTTGGAACTTGAGAGATGGATCTGATGGGTGTGTGAGGAACACGGCTTTGAATTGTTCCACTGACAAGTTCTTGCATCTTGAGCACACGAAGCTTCCAGAGACAAGCAGCGTGTTTATGAATAAGAGTATGACACTTGATGAATGTGGGAGTTTGTGTAAGAGGAATTGTTCATGCACTGCATATGCAAACATCGATATCAGAAATGGAGGAAGTGGCTGTGTTATGTGGCTTGGTCAACTCGTTGACATGAGAGTCTACAGTACGGATGGCCAAGATCTCTATGTCAGATTAGCAGCTGCTGATATAGGATCTACTAGCTCCAACAAGAATCATAGAGTAGTACAGGCTGTTGGCATCACACTTAGCGCACTTGTTTTAGTTTTGGGATTGGTTGCTATTTGTTACCTAATGAAGAAGAGTAAACAAAGATCTAGAGGTTTTGTCCGCAGAAGTCATGATTGGATAATGAATGAGGTGGTGTTTTCTAGAAAACACTTACGTGATGAAAGGAACATGGATGATCTGGAATTGCCAATGTTTGATTTCGATACCTTAACAATGGCTACAAACAATTTCTCTCAAGATAATAAACTTGGAGAAGGAGGCTTCGGTAGAGTTTATAGAGGAAGATTGATTGAAGGCCAAGAAATTGCTGTGAAGAGATTATCAAAGAAATCTGGACAAGGAAATGAAGAGTTCAAGAATGAAGTCAAGTTAATTGTCAAGCTGCAACACCAAAATCTTGTTCGGTTGCTTGGTTGCTGCATTGAGAAGGATGAGAAGATGTTGGTGTATGAGTATTTGGAAAATAGAGGCCTTGATTCCATTTTATTTGGTAGTATTGTTTATTTCAATATTTTCTTCTTTCTGATTATGATCTATATTTGTTTTACTCTTATCCTTAGTTTATATGTATTAATAATAACTAATGTTGCAGACAAATCGAAAAGACCCTTGCTTGATTGGGAAAGACGTTTCAATATTATCTATGGGATAGCTAAAGGGCTTCTTTATTTGCATCAAGATTCGAGATATCGAATTATTCATAGAGATCTCAAGACAAGTAACATATTATTAGATAATGAAATGAATCCAAAAATATCAGACTTTGGAATCGCTAGAATTTTTGACAAAAATCAAATGCAAGCAAAAACATTAAGAATTGTTGGAACATATGGTTATATGTCTCCTGAATATGCTATGGACGGAAACTTCTCAATAAAATCTGATGTTTTTAGCTTTGGAGTTATGGTATTGGAGATTATAACTGGAAAAAAGAATAGAGAGTTTTACAGTGATAACAATGAATTGAATCTTCTAGGAAATGTATGGAGGCATTGGCATGAAGGAACTGCACTGACACTAATTGATCCATCCATTGGCAATTCATACGCAGAATCTAAAGTTATGAGATGCATACATATTAGTCTCTTATGTGTACAAGAACGTGCAGAAGATAGACCAACAATGTCTTCAGTGATCTTAATGTTGAGTAGTGAAGCTCCATCAATGCCAAAACCTAAAATTCCTGGATTTTCCGCAAGGACAAATTATCCAGACATTGATTCATCTTCAAACAAGCAAAATGATATCTGGAGTGTGAATCAAATCACAATCACAATGTTAGATGCTAGGTAG 2616 0.3922 MRIFFTHLNYFIILVISCFFFFITPSTSLDTLTGTQILTTNQTLLSKNQTFALGFFRGSNTNYYLGIWYNNINPQTIVWVANRDNPVDNSTGYLKIGDNGNFVLLNSSGNPAWSSNQTSAKNPVLQLLDTGNLVLKDSSDKTNNNYLWQSFDYPTDTVLPGMKIGWNLDTGTEKHLTSWKVTGEDPSSGDFTIKLDYHGLPEAFLRKNQTIIFRTGPWNGEGYSGIPAMKDNIDGLKFNFTYDEHSVLYSFSITEPSLLPRIILTSDTDGEFQRYMWIQGSWNKFWYQPADQCDYYRQCGPYGVCDENASPICKCMQGFRPKNQEAWNLRDGSDGCVRNTALNCSTDKFLHLEHTKLPETSSVFMNKSMTLDECGSLCKRNCSCTAYANIDIRNGGSGCVMWLGQLVDMRVYSTDGQDLYVRLAAADIGSTSSNKNHRVVQAVGITLSALVLVLGLVAICYLMKKSKQRSRGFVRRSHDWIMNEVVFSRKHLRDERNMDDLELPMFDFDTLTMATNNFSQDNKLGEGGFGRVYRGRLIEGQEIAVKRLSKKSGQGNEEFKNEVKLIVKLQHQNLVRLLGCCIEKDEKMLVYEYLENRGLDSILFGSIVYFNIFFFLIMIYICFTLILSLYVLIITNVADKSKRPLLDWERRFNIIYGIAKGLLYLHQDSRYRIIHRDLKTSNILLDNEMNPKISDFGIARIFDKNQMQAKTLRIVGTYGYMSPEYAMDGNFSIKSDVFSFGVMVLEIITGKKNREFYSDNNELNLLGNVWRHWHEGTALTLIDPSIGNSYAESKVMRCIHISLLCVQERAEDRPTMSSVILMLSSEAPSMPKPKIPGFSARTNYPDIDSSSNKQNDIWSVNQITITMLDAR 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00486 871 Gene3D Hepatocyte Growth Factor 340 424 - -
Arst10g00486 871 SMART serkin_6 518 830 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g00486 871 SMART blect_4 35 154 IPR001480 -
Arst10g00486 871 Pfam S-locus glycoprotein domain 213 323 IPR000858 GO:0048544
Arst10g00486 871 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 483 593 - -
Arst10g00486 871 SMART ntp_6 344 423 IPR003609 -
Arst10g00486 871 Pfam Receptor serine/threonine kinase 475 508 IPR022126 GO:0004674
Arst10g00486 871 CDD PAN_AP_plant 340 424 - -
Arst10g00486 871 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 629 831 - -
Arst10g00486 871 Pfam Domain of unknown function (DUF3403) 825 871 IPR021820 GO:0004674
Arst10g00486 871 ProSiteProfiles Bulb-type lectin domain profile. 29 148 IPR001480 -
Arst10g00486 871 Pfam Protein tyrosine and serine/threonine kinase 520 820 IPR001245 GO:0004672|GO:0006468
Arst10g00486 871 PIRSF SRK 634 871 IPR024171 GO:0004674
Arst10g00486 871 PIRSF SRK 1 608 IPR024171 GO:0004674
Arst10g00486 871 ProSiteProfiles Protein kinase domain profile. 518 830 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g00486 871 ProSitePatterns Serine/Threonine protein kinases active-site signature. 673 685 IPR008271 GO:0004672|GO:0006468
Arst10g00486 871 ProSiteProfiles PAN/Apple domain profile. 344 424 IPR003609 -
Arst10g00486 871 CDD B_lectin 35 154 IPR001480 -
Arst10g00486 871 Gene3D Phosphorylase Kinase; domain 1 492 593 - -
Arst10g00486 871 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 25 151 - -
Arst10g00486 871 Pfam D-mannose binding lectin 76 180 IPR001480 -
Arst10g00486 871 SUPERFAMILY Protein kinase-like (PK-like) 503 844 IPR011009 -
Arst10g00486 871 Pfam PAN-like domain 344 409 IPR003609 -
Arst10g00486 871 SUPERFAMILY alpha-D-mannose-specific plant lectins 62 219 IPR036426 -
Arst10g00486 871 Gene3D - 25 151 IPR036426 -
Arst10g00486 871 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Arst10g00486 871 Gene3D Transferase(Phosphotransferase) domain 1 629 832 - -
Arst10g00486 871 ProSitePatterns Protein kinases ATP-binding region signature. 524 546 IPR017441 GO:0005524
Arst10g00486 871 CDD STKc_IRAK 524 823 - -
Arst10g00486 871 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 15 814 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00486 Arst-Chr10 3882579 3895055 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00486 453 871 Receptor kinase-like Gene Family AT4G21400 49.409 1.09e-123 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Arst10g00486 PK_Tyr_Ser-Thr 3.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00486 - - aip:107621495 1391.71