Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00485 ATGAGAATCTTCTTCACTCACCTTAACTACTTCATCATCCTTGTTATTAGCTGCTTCTTCTTCTTTATCACTCCATCAACCTCTTTGGATACTTTAACCGGAACTCAAATCCTCACAACCAACCAAACCTTGTTGTCAAAAAACCAAACCTTCGCTCTAGGCTTCTTCAGAGGTTCCAACACCAACTATTACCTCGGAATATGGTATAACAACATCAATCCTCAAACTATAGTTTGGGTTGCAAACAGAGACAACCCCGTTGACAACTCTACCGGCTATCTCAAGATCGGAGACAACGGAAACTTTGTCCTCCTCAATTCATCCGGGAACCCTGCATGGTCCTCCAACCAAACCAGCGCCAAGAATCCTGTTCTCCAGCTCCTCGATACCGGTAACCTTGTTCTCAAAGATTCATCAGACAAGACCAACAATAACTACTTATGGCAGAGCTTTGATTACCCAACGGATACCGTGTTACCGGGGATGAAGATCGGTTGGAACTTGGACACAGGAACGGAGAAGCATTTAACATCATGGAAGGTTACAGGTGAAGACCCTTCAAGCGGTGACTTCACTATTAAGTTAGATTACCATGGTTTACCTGAGGCTTTCCTCAGGAAAAACCAAACTATAATATTCCGAACTGGTCCTTGGAATGGTGAGGGATACAGTGGGATCCCGGCGATGAAAGACAACATCGACGGTCTCAAGTTTAATTTCACTTATGATGAGCACAGTGTGTTGTACTCTTTTTCCATTACAGAACCTTCCTTGTTGCCGAGGATAATTCTGACATCTGATACTGATGGCGAGTTTCAACGCTACATGTGGATACAAGGAAGTTGGAACAAGTTCTGGTATCAACCAGCGGATCAATGCGATTACTATAGACAGTGTGGTCCGTATGGAGTGTGTGACGAGAATGCTTCACCGATTTGCAAGTGTATGCAGGGGTTCAGGCCTAAGAACCAAGAAGCTTGGAACTTGAGAGATGGATCTGATGGGTGTGTGAGGAACACGGCTTTGAATTGTTCCACTGACAAGTTCTTGCATCTTGAGCACACGAAGCTTCCAGAGACAAGCAGCGTGTTTATGAATAAGAGTATGACACTTGATGAATGTGGGAGTTTGTGTAAGAGGAATTGTTCATGCACTGCATATGCAAACATCGATATCAGAAATGGAGGAAGTGGCTGTGTTATGTGGCTTGGTCAACTCGTTGACATGAGAGTCTACAGTACGGATGGCCAAGATCTCTATGTCAGATTAGCAGCTGCTGATATAGGATCTACTAGCTCCAACAAGAATCATAGAGTAGTACAGGCTGTTGGCATCACACTTAGCGCACTTGTTTTAGTTTTGGGATTGGTTGCTATTTGTTACCTAATGAAGAAGAGTAAACAAAGATCTAGAGCCGCTATTCCAGGTTTTGTCCGCAGAAGTCATGATTGGATAATGAATGAGGTGGTGTTTTCTAGAAAACACTTACGTGATGAAAGGAACATGGATGATCTGGAATTGCCAATGTTTGATTTCGATACCTTAACAATGGCTACAAACAATTTCTCTCAAGATAATAAACTTGGAGAAGGAGGCTTCGGTAGAGTTTATAGAGGAAGATTGATTGAAGGCCAAGAAATTGCTGTGAAGAGATTATCAAAGAAATCTGGACAAGGAAATGAAGAGTTCAAGAATGAAGTCAAGTTAATTGTCAAGCTGCAACACCAAAATCTTGTTCGGTTGCTTGGTTGCTGCATTGAGAAGGATGAGAAGATGTTGGTGTATGAGTATTTGGAAAATAGAGGCCTTGATTCCATTTTATTTGACAAATCGAAAAGACCCTTGCTTGATTGGGAAAGACGTTTCAATATTATCTATGGGATAGCTAAAGGGCTTCTTTATTTGCATCAAGATTCGAGATATCGAATTATTCATAGAGATCTCAAGACAAGTAACATATTATTAGATAATGAAATGAATCCAAAAATATCAGACTTTGGAATCGCTAGAATTTTTGACAAAAATCAAATGCAAGCAAAAACATTAAGAATTGTTGGAACATATGGTTATATGTCTCCTGAATATGCTATGGACGGAAACTTCTCAATAAAATCTGATGTTTTTAGCTTTGGAGTTATGGTATTGGAGATTATAACTGGAAAAAAGAATAGAGAGTTTTACAGTGATAACAATGAATTGAATCTTCTAGGAAATGTATGGAGGCATTGGCATGAAGGAACTGCACTGACACTAATTGATCCATCCATTGGCAATTCATACGCAGAATCTAAAGTTATGAGATGCATACATATTAGTCTCTTATGTGTACAAGAACGTGCAGAAGATAGACCAACAATGTCTTCAGTGATCTTAATGTTGAGTAGTGAAGCTCCATCAATGCCAAAACCTAAAATTCCTGGATTTTCCGCAAGGACAAATTATCCAGACATTGATTCATCTTCAAACAAGCAAAATGATATCTGGAGTGTGAATCAAATCACAATCACAATGTTAGATGCTAGGTAG 2526 0.4002 MRIFFTHLNYFIILVISCFFFFITPSTSLDTLTGTQILTTNQTLLSKNQTFALGFFRGSNTNYYLGIWYNNINPQTIVWVANRDNPVDNSTGYLKIGDNGNFVLLNSSGNPAWSSNQTSAKNPVLQLLDTGNLVLKDSSDKTNNNYLWQSFDYPTDTVLPGMKIGWNLDTGTEKHLTSWKVTGEDPSSGDFTIKLDYHGLPEAFLRKNQTIIFRTGPWNGEGYSGIPAMKDNIDGLKFNFTYDEHSVLYSFSITEPSLLPRIILTSDTDGEFQRYMWIQGSWNKFWYQPADQCDYYRQCGPYGVCDENASPICKCMQGFRPKNQEAWNLRDGSDGCVRNTALNCSTDKFLHLEHTKLPETSSVFMNKSMTLDECGSLCKRNCSCTAYANIDIRNGGSGCVMWLGQLVDMRVYSTDGQDLYVRLAAADIGSTSSNKNHRVVQAVGITLSALVLVLGLVAICYLMKKSKQRSRAAIPGFVRRSHDWIMNEVVFSRKHLRDERNMDDLELPMFDFDTLTMATNNFSQDNKLGEGGFGRVYRGRLIEGQEIAVKRLSKKSGQGNEEFKNEVKLIVKLQHQNLVRLLGCCIEKDEKMLVYEYLENRGLDSILFDKSKRPLLDWERRFNIIYGIAKGLLYLHQDSRYRIIHRDLKTSNILLDNEMNPKISDFGIARIFDKNQMQAKTLRIVGTYGYMSPEYAMDGNFSIKSDVFSFGVMVLEIITGKKNREFYSDNNELNLLGNVWRHWHEGTALTLIDPSIGNSYAESKVMRCIHISLLCVQERAEDRPTMSSVILMLSSEAPSMPKPKIPGFSARTNYPDIDSSSNKQNDIWSVNQITITMLDAR 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00485 841 SMART serkin_6 522 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g00485 841 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 15 784 - -
Arst10g00485 841 Pfam S-locus glycoprotein domain 213 323 IPR000858 GO:0048544
Arst10g00485 841 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 25 151 - -
Arst10g00485 841 Gene3D - 25 151 IPR036426 -
Arst10g00485 841 Pfam Protein tyrosine and serine/threonine kinase 524 790 IPR001245 GO:0004672|GO:0006468
Arst10g00485 841 Pfam D-mannose binding lectin 76 180 IPR001480 -
Arst10g00485 841 SMART blect_4 35 154 IPR001480 -
Arst10g00485 841 Pfam PAN-like domain 344 409 IPR003609 -
Arst10g00485 841 ProSitePatterns Serine/Threonine protein kinases active-site signature. 643 655 IPR008271 GO:0004672|GO:0006468
Arst10g00485 841 SMART ntp_6 344 423 IPR003609 -
Arst10g00485 841 Gene3D Phosphorylase Kinase; domain 1 496 597 - -
Arst10g00485 841 CDD PAN_AP_plant 340 424 - -
Arst10g00485 841 SUPERFAMILY Protein kinase-like (PK-like) 507 814 IPR011009 -
Arst10g00485 841 ProSitePatterns Protein kinases ATP-binding region signature. 528 550 IPR017441 GO:0005524
Arst10g00485 841 ProSiteProfiles Bulb-type lectin domain profile. 29 148 IPR001480 -
Arst10g00485 841 Gene3D Transferase(Phosphotransferase) domain 1 598 802 - -
Arst10g00485 841 Pfam Receptor serine/threonine kinase 479 512 IPR022126 GO:0004674
Arst10g00485 841 ProSiteProfiles PAN/Apple domain profile. 344 424 IPR003609 -
Arst10g00485 841 PIRSF SRK 1 841 IPR024171 GO:0004674
Arst10g00485 841 Pfam Domain of unknown function (DUF3403) 795 841 IPR021820 GO:0004674
Arst10g00485 841 CDD B_lectin 35 154 IPR001480 -
Arst10g00485 841 CDD STKc_IRAK 528 793 - -
Arst10g00485 841 ProSiteProfiles Protein kinase domain profile. 522 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g00485 841 SUPERFAMILY alpha-D-mannose-specific plant lectins 62 219 IPR036426 -
Arst10g00485 841 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 487 597 - -
Arst10g00485 841 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Arst10g00485 841 Gene3D Hepatocyte Growth Factor 340 424 - -
Arst10g00485 841 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 598 801 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00485 Arst-Chr10 3882579 3895055 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00485 510 808 Receptor kinase-like Gene Family AT4G11530 62.000 7.80e-128 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Arst10g00485 PK_Tyr_Ser-Thr 5.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00485 - - aip:107621495 1405.19