Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00482 ATGAGAATCTTCTTCACTCACCTTAACTACTTCATCATCCTTGTTATTAGCTGCTTCTTCTTCTTTATCACTCCATCAACCTCTTTGGATACTTTAACCGGAACTCAAATCCTCACAACCAACCAAACCTTGTTGTCAAAAAACCAAACCTTCGCTCTAGGCTTCTTCAGAGGTTCCAACACCAACTATTACCTCGGAATATGGTACAACAACATCAATCCTCAAACCATAGTTTGGGTTGCAAACAGAGACAACCCCATTGAAACCTCCACAGGCTATCTCAAGATTGGAGACAATGGAAACTTTGTCCTTCTCAATTCATCCGGGAATCCTGCATGGTCCTCCAACCAAACCCACGCCAAGAATCCAGTTCTCCAGCTCCTTGATACCGGTAACCTTGTTCTCAAAGATTCATCAGACAAGACCAATAATAACTACTTATGGCAGAGCTTCGATTATCCAACCGATACCATGTTACCGGGGATGAAGATCGGTTGGAACTTGGACACAGGAACAGAGAAGTACTTAACATCATGGAAGGTCACAGGTGAAGACCCTTCAAGCGGGGACTACACTTTGAAGATAGATTACCATGGTTTACCTGAGACTTTCTTCTGGAGAAACCAAACTATAATATGCCGAAGTGGTCCTTGGAATGGTGAGAGATTCAGTGGGCACCCGGCGATGAAAGATAACACCGATGGTCTCAAGTTCAATTTCACTTATGATGATCACGGTGTGTCGTACTCTTTTTCCGTTACAAGACCCTCCTTGTTGTCGAGGATAATTGTGACATCTGATACTGATGGCGTGTTTCAACGCTACATGTGGATACAAGGAAGATGGAACAAGTTCTGTTACTTACCAGCGGATCAATGCGATGAATATGGAGTGTGTGGTCCGTATGGAGTTTGTGACAAGAATGCTTCCCCGGTTTGCACTTGTATGGAGGGGTTCAGGCCTAAGAACCAAGAAGCTTGGAACTTGAGAGATGGGTCTGATGGGTGTGTGAGGAACACGGATTTGAATTGTTTGACTGACAAGTTCTTGCATCTTGAGAACATGAAGCTGCCAGAGACAAATAGCGTGTTTATGAATAAGAGTATGACACTTGATGAATGTGGGAGTTTGTGTAAGAGGAATTGTTCATGCACTGCATATGCAAACATTGATATCAGAAACGGAGGAAGTGGCTGTGTTATGTGGATTGGTCAACTCTTTGACATGAGTGTCTACAGTACGGATGGCCAAGATCTCTATGTCAGATTGGCTGCAGCTGATATAGGATCTACTAACTCCAACAAGAATCATAGAGTAGTACAGGCTATTAGCATCACACTTACTGCACTTGTTTTAGTTTTTGGATTGGTTGCTATTTGTTACTTATGGAAGAAGGGAAAACAAAGATCTAGAGGTTTTGTCCACAGAAGTCATGATAGTTTGATGAATGAGGTGGTGTCTTCTAGAGGATACTTAGGTGATGAAAGGAACATGGATGATATAGAGCTGCCATTGTTTGATTGTGATACCTTAACAATGGCTACGAACAATTTCTCTCAAGATAATAAACTTGGAGAAGGAGGCTTCGGTAGTGTTTATATGGGTAGATTGATTGAAGGTCAAAAAATTGCTGTGAAGAGATTATCAAAATATTCTGGACAAGGAATTGAGGAGTTTAAGAATGAAGTCAAGCTAATTGTCAAACTCCAACATCGAAATCTTGTTCGATTGCTTGGTTGCTGTATTGAAAATGATGAAAAGATGTTGGTGTATGAGTATATGGAAAATAGAGGCCTTGATTCCATTTTGTTTGACAAATCAGAAAGTAGAGTCTTGCTTGACTGGGAAAGGCGTTTTAATATTATATATGGAATAGCTAGAGGACTTCTTTACTTGCATCAAGATTCAAGATTTCGAATTATTCATAGAGATCTTAAGATAAGTAATATATTACTAGATAGTGAAATGATTCCCAAGATATCAGATTTTGGAATGGCAAGAATATTTGACAAAGATCAAACACAAGCAAAAACATTAAGAGTTGTTGGAACATATGGTTATATGTCTCCTGAATATGCTATGGACGGAAACTTTTCAGTAAAATCTGATGTTTTTAGTTTTGGTGTTATGGTATTGGAGATCATAACTGGAAAGAAGAATAGAGAGTTTTATAGTGATAACGATGAATTGAATCTTTTGGGAAATGTATGGAGACATTGGCATGAAGGAACTGCATTGACACTTCTTGATCCATCAATCGGCAATTCATACACAGAAGCTGAAGTTGTAAGATGCATACATATTGGGCTCTTATGTGTCCAAGAACATGCAGAAGATAGACCAACAATGTCTTCGGTGATCTTAATGTTAAGTAGTGAAACTCCATCTTTACCAAATCCTAAAACTCCTGGATTTTCCATAAAGAAAAATCATCCAAAGACTGAGTCATCTTCAAGTAGTGTAAATCAAGTTACCGTCACAATGTTAGATGCTAGGTAG 2499 0.3938 MRIFFTHLNYFIILVISCFFFFITPSTSLDTLTGTQILTTNQTLLSKNQTFALGFFRGSNTNYYLGIWYNNINPQTIVWVANRDNPIETSTGYLKIGDNGNFVLLNSSGNPAWSSNQTHAKNPVLQLLDTGNLVLKDSSDKTNNNYLWQSFDYPTDTMLPGMKIGWNLDTGTEKYLTSWKVTGEDPSSGDYTLKIDYHGLPETFFWRNQTIICRSGPWNGERFSGHPAMKDNTDGLKFNFTYDDHGVSYSFSVTRPSLLSRIIVTSDTDGVFQRYMWIQGRWNKFCYLPADQCDEYGVCGPYGVCDKNASPVCTCMEGFRPKNQEAWNLRDGSDGCVRNTDLNCLTDKFLHLENMKLPETNSVFMNKSMTLDECGSLCKRNCSCTAYANIDIRNGGSGCVMWIGQLFDMSVYSTDGQDLYVRLAAADIGSTNSNKNHRVVQAISITLTALVLVFGLVAICYLWKKGKQRSRGFVHRSHDSLMNEVVSSRGYLGDERNMDDIELPLFDCDTLTMATNNFSQDNKLGEGGFGSVYMGRLIEGQKIAVKRLSKYSGQGIEEFKNEVKLIVKLQHRNLVRLLGCCIENDEKMLVYEYMENRGLDSILFDKSESRVLLDWERRFNIIYGIARGLLYLHQDSRFRIIHRDLKISNILLDSEMIPKISDFGMARIFDKDQTQAKTLRVVGTYGYMSPEYAMDGNFSVKSDVFSFGVMVLEIITGKKNREFYSDNDELNLLGNVWRHWHEGTALTLLDPSIGNSYTEAEVVRCIHIGLLCVQEHAEDRPTMSSVILMLSSETPSLPNPKTPGFSIKKNHPKTESSSSSVNQVTVTMLDAR 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00482 832 CDD STKc_IRAK 524 790 - -
Arst10g00482 832 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 484 593 - -
Arst10g00482 832 Pfam D-mannose binding lectin 76 180 IPR001480 -
Arst10g00482 832 Pfam Protein tyrosine and serine/threonine kinase 520 787 IPR001245 GO:0004672|GO:0006468
Arst10g00482 832 Gene3D Hepatocyte Growth Factor 343 424 - -
Arst10g00482 832 ProSiteProfiles Bulb-type lectin domain profile. 29 148 IPR001480 -
Arst10g00482 832 Pfam Domain of unknown function (DUF3403) 792 832 IPR021820 GO:0004674
Arst10g00482 832 ProSiteProfiles Protein kinase domain profile. 518 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g00482 832 Gene3D - 25 151 IPR036426 -
Arst10g00482 832 SMART ntp_6 344 423 IPR003609 -
Arst10g00482 832 Pfam PAN-like domain 345 409 IPR003609 -
Arst10g00482 832 CDD PAN_AP_plant 340 424 - -
Arst10g00482 832 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 15 781 - -
Arst10g00482 832 SUPERFAMILY Protein kinase-like (PK-like) 503 818 IPR011009 -
Arst10g00482 832 ProSitePatterns Serine/Threonine protein kinases active-site signature. 640 652 IPR008271 GO:0004672|GO:0006468
Arst10g00482 832 Gene3D Transferase(Phosphotransferase) domain 1 594 798 - -
Arst10g00482 832 Gene3D Phosphorylase Kinase; domain 1 493 593 - -
Arst10g00482 832 MobiDBLite consensus disorder prediction 795 832 - -
Arst10g00482 832 PIRSF SRK 1 832 IPR024171 GO:0004674
Arst10g00482 832 SMART serkin_6 518 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g00482 832 CDD B_lectin 35 154 IPR001480 -
Arst10g00482 832 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 25 151 - -
Arst10g00482 832 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 594 798 - -
Arst10g00482 832 SMART blect_4 35 154 IPR001480 -
Arst10g00482 832 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Arst10g00482 832 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 180 IPR036426 -
Arst10g00482 832 ProSitePatterns Protein kinases ATP-binding region signature. 524 546 IPR017441 GO:0005524
Arst10g00482 832 ProSiteProfiles PAN/Apple domain profile. 344 424 IPR003609 -
Arst10g00482 832 Pfam S-locus glycoprotein domain 214 323 IPR000858 GO:0048544
Arst10g00482 832 Pfam Receptor serine/threonine kinase 475 506 IPR022126 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00482 Arst-Chr10 3882578 3939085 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00482 439 819 Receptor kinase-like Gene Family AT4G05200 50.909 6.99e-125 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Arst10g00482 PK_Tyr_Ser-Thr 3.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00482 - - aip:107621495 1362.44