Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00481 ATGAGAATCTTCTTCACTCACCTTAACTACTTCATCATCCTTGTTATTAGCTGCTTCTTCTTCTTTATCACTCCATCAACCTCTTTGGATACTTTAACCGGAACTCAAATCCTCACAACCAACCAAACCTTGTTGTCAAAAAACCAAACCTTCGCTCTAGGCTTCTTCAGAGGTTCCAACACCAACTATTACCTCGGAATATGGTACAACAACATCAATCCTCAAACCATAGTTTGGGTTGCAAACAGAGACAACCCCATTGAAACCTCCACAGGCTATCTCAAGATTGGAGACAATGGAAACTTTGTCCTTCTCAATTCATCCGGGAATCCTGCATGGTCCTCCAACCAAACCCACGCCAAGAATCCAGTTCTCCAGCTCCTTGATACCGGTAACCTTGTTCTCAAAGATTCATCAGACAAGACCAATAATAACTACTTATGGCAGAGCTTCGATTATCCAACCGATACCATGTTACCGGGGATGAAGATCGGTTGGAACTTGGACACAGGAACAGAGAAGTACTTAACATCATGGAAGGTCACAGGTGAAGACCCTTCAAGCGGGGACTACACTTTGAAGATAGATTACCATGGTTTACCTGAGACTTTCTTCTGGAGAAACCAAACTATAATATGCCGAAGTGGTCCTTGGAATGGTGAGAGATTCAGTGGGCACCCGGCGATGAAAGATAACACCGATGGTCTCAAGTTCAATTTCACTTATGATGATCACGGTGTGTCGTACTCTTTTTCCGTTACAAGACCCTCCTTGTTGTCGAGGATAATTGTGACATCTGATACTGATGGCGTGTTTCAACGCTACATGTGGATACAAGGAAGATGGAACAAGTTCTGTTACTTACCAGCGGATCAATGCGATGAATATGGAGTGTGTGGTCCGTATGGAGTTTGTGACAAGAATGCTTCCCCGGTTTGCACTTGTATGGAGGGGTTCAGGCCTAAGAACCAAGAAGCTTGGAACTTGAGAGATGGGTCTGATGGGTGTGTGAGGAACACGGATTTGAATTGTTTGACTGACAAGTTCTTGCATCTTGAGAACATGAAGCTGCCAGAGACAAATAGCGTGTTTATGAATAAGAGTATGACACTTGATGAATGTGGGAGTTTGTGTAAGAGGAATTGTTCATGCACTGCATATGCAAACATTGATATCAGAAACGGAGGAAGTGGCTGTGTTATGTGGATTGGTCAACTCTTTGACATGAGTGTCTACAGTACGGATGGCCAAGATCTCTATGTCAGATTGGCTGCAGCTGATATAGGATCTACTAACTCCAACAAGAATCATAGAGTAGTACAGGCTATTAGCATCACACTTACTGCACTTGTTTTAGTTTTTGGATTGGTTGCTATTTGTTACTTATGGAAGAAGGGAAAACAAAGATCTAGAGCTGCTATTTCAGGTTTTGTCCACAGAAATCATGATTGGTTAATGAATGAGGTGGTGCCTTCTAGAAGATACTTGGGTGATGAAAGGAACATGGATGATCTAGAGTTGCCAATGTTTGATTTTGATACCTTAATGATGGCTACAAACAATTTCTCTATAGATAATAAACTTGGAGAAGGAGGCTTCGGTAGTGTTTATAGGGGCAGATTGATTGAAGGCCAAGAAATTGCTGTGAAAAGATTGTCAGAAGACTCTGGACAAGGAATTGAAGAATTTAAAAATGAAGTCAAATTAATTGTCAAGCTGCAACACCGAAATCTTGTTCGGTTGCTTGGTTGCTGCATTAAGAAAAATGAGAAGATGTTGGTGTATGAATATATGGAAAATAGAGGCCTTGATTCCATTTTGTTTGACAAATCAGAAAGTAGAGTCTTGCTTGACTGGGAAAGGCGTTTTAATATTATATATGGAATAGCTAGAGGACTTCTTTACTTGCATCAAGATTCAAGATTTCGAATTATTCATAGAGATCTTAAGATAAGTAATATATTACTAGATAGTGAAATGATTCCCAAGATATCAGATTTTGGAATGGCAAGAATATTTGACAAAGATCAAACACAAGCAAAAACATTAAGAGTTGTTGGAACATATGGTTATATGTCTCCTGAATATGCTATGGACGGAAACTTTTCAGTAAAATCTGATGTTTTTAGTTTTGGTGTTATGGTATTGGAGATCATAACTGGAAAGAAGAATAGAGAGTTTTATAGTGATAACGATGAATTGAATCTTTTGGGAAATGTATGGAGACATTGGCATGAAGGAACTGCATTGACACTTCTTGATCCATCAATCGGCAATTCATACACAGAAGCTGAAGTTGTAAGATGCATACATATTGGGCTCTTATGTGTCCAAGAACATGCAGAAGATAGACCAACAATGTCTTCGGTGATCTTAATGTTAAGTAGTGAAACTCCATCTTTACCAAATCCTAAAACTCCTGGATTTTCCATAAAGAAAAATCATCCAAAGACTGAGTCATCTTCAAGTAGTGTAAATCAAGTTACCGTCACAATGTTAGATGCTAGGTAG 2511 0.3947 MRIFFTHLNYFIILVISCFFFFITPSTSLDTLTGTQILTTNQTLLSKNQTFALGFFRGSNTNYYLGIWYNNINPQTIVWVANRDNPIETSTGYLKIGDNGNFVLLNSSGNPAWSSNQTHAKNPVLQLLDTGNLVLKDSSDKTNNNYLWQSFDYPTDTMLPGMKIGWNLDTGTEKYLTSWKVTGEDPSSGDYTLKIDYHGLPETFFWRNQTIICRSGPWNGERFSGHPAMKDNTDGLKFNFTYDDHGVSYSFSVTRPSLLSRIIVTSDTDGVFQRYMWIQGRWNKFCYLPADQCDEYGVCGPYGVCDKNASPVCTCMEGFRPKNQEAWNLRDGSDGCVRNTDLNCLTDKFLHLENMKLPETNSVFMNKSMTLDECGSLCKRNCSCTAYANIDIRNGGSGCVMWIGQLFDMSVYSTDGQDLYVRLAAADIGSTNSNKNHRVVQAISITLTALVLVFGLVAICYLWKKGKQRSRAAISGFVHRNHDWLMNEVVPSRRYLGDERNMDDLELPMFDFDTLMMATNNFSIDNKLGEGGFGSVYRGRLIEGQEIAVKRLSEDSGQGIEEFKNEVKLIVKLQHRNLVRLLGCCIKKNEKMLVYEYMENRGLDSILFDKSESRVLLDWERRFNIIYGIARGLLYLHQDSRFRIIHRDLKISNILLDSEMIPKISDFGMARIFDKDQTQAKTLRVVGTYGYMSPEYAMDGNFSVKSDVFSFGVMVLEIITGKKNREFYSDNDELNLLGNVWRHWHEGTALTLLDPSIGNSYTEAEVVRCIHIGLLCVQEHAEDRPTMSSVILMLSSETPSLPNPKTPGFSIKKNHPKTESSSSSVNQVTVTMLDAR 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00481 836 SMART serkin_6 522 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g00481 836 Gene3D Hepatocyte Growth Factor 343 424 - -
Arst10g00481 836 ProSiteProfiles Bulb-type lectin domain profile. 29 148 IPR001480 -
Arst10g00481 836 SMART ntp_6 344 423 IPR003609 -
Arst10g00481 836 Gene3D Transferase(Phosphotransferase) domain 1 598 802 - -
Arst10g00481 836 Pfam PAN-like domain 345 409 IPR003609 -
Arst10g00481 836 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 598 802 - -
Arst10g00481 836 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 15 785 - -
Arst10g00481 836 Pfam Protein tyrosine and serine/threonine kinase 523 791 IPR001245 GO:0004672|GO:0006468
Arst10g00481 836 CDD PAN_AP_plant 340 424 - -
Arst10g00481 836 ProSitePatterns Protein kinases ATP-binding region signature. 528 550 IPR017441 GO:0005524
Arst10g00481 836 Pfam Domain of unknown function (DUF3403) 796 836 IPR021820 GO:0004674
Arst10g00481 836 PIRSF SRK 1 836 IPR024171 GO:0004674
Arst10g00481 836 MobiDBLite consensus disorder prediction 799 836 - -
Arst10g00481 836 Pfam D-mannose binding lectin 76 180 IPR001480 -
Arst10g00481 836 CDD B_lectin 35 154 IPR001480 -
Arst10g00481 836 Pfam S-locus glycoprotein domain 214 323 IPR000858 GO:0048544
Arst10g00481 836 Gene3D Phosphorylase Kinase; domain 1 497 597 - -
Arst10g00481 836 SUPERFAMILY Protein kinase-like (PK-like) 507 822 IPR011009 -
Arst10g00481 836 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 25 151 - -
Arst10g00481 836 Gene3D - 25 151 IPR036426 -
Arst10g00481 836 ProSiteProfiles Protein kinase domain profile. 522 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g00481 836 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 488 597 - -
Arst10g00481 836 SMART blect_4 35 154 IPR001480 -
Arst10g00481 836 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Arst10g00481 836 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 180 IPR036426 -
Arst10g00481 836 ProSitePatterns Serine/Threonine protein kinases active-site signature. 644 656 IPR008271 GO:0004672|GO:0006468
Arst10g00481 836 ProSiteProfiles PAN/Apple domain profile. 344 424 IPR003609 -
Arst10g00481 836 CDD STKc_IRAK 528 794 - -
Arst10g00481 836 Pfam Receptor serine/threonine kinase 479 512 IPR022126 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00481 Arst-Chr10 3882578 3939087 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00481 510 836 Receptor kinase-like Gene Family AT4G11530 57.396 1.32e-125 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Arst10g00481 PK_Tyr_Ser-Thr 8.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00481 - - aip:107621495 1376.3