Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00480 ATGGCTACTGTGTTTTACCAACACGTGTCTATTCTGTTCTTGCTCTGTTTCTTCTTCTTCCTCTGTTTCTGTGCTATGTTTTCTGCTGCAGCTGCCAGGTCCAGCATCACAACCGCTCAGTTCATTAGGAACCGTGACAATCTCATCTCAGATGGAAACAACTTCGAAATGGGTTTCTTCACTTACGATAATTATAACAACACTTACGTTGGGATTTGGTACTACACCATTCCTCAACCATACGTCATATGGGTCGCTAACAGAGACTACCCCGTCAAAGGCGATGGTGGCGCTATAACTATCCAACAAGATGGAAACTTGGTTATCTTCGATGGACAAAAGCGCAAAGTATGGTCAAGTAATGTCACAATTTCTGCGAATAACAAGACCACTGAAGCTGTTCTTGGTGATGATGGAAACCTCGTACTTACACTCACAGATTCTAGGAAAAAGGTATGGCAGAGCTTTGAGGATCCAAGCGATACGTATTTACCGGGTATGAAGGTTCCAGCGAATCCTTCAAAGGGGAAGAACAACTTTGTCTTCACTTCATGGAAATCAGCCAAGGACCCTTCACCTGGGAAATACACAATGGGGGTTGATCCTGAGAGTTTGCCTCAGATTGTGGTTTGGGAAGCAGGGGAAAGAAGGTGGAGGAGTGGTTACTGGAATGGAGGAGTCTTCACTGGTGTGGACATGACAGGAAGCGTGCTCAACGGTTTCACTATTAACAAAGGCGATAAAAGCTCTTACTTTTCTTATAGCGTGCCCAATGGTAGTGATAAGGTAAGGTTTCAGATAACTTGGGATGGGTATGAGAAAGACTTGAAGTGGGATCCATCTCAGAAACAATGGAACGAGACACAGAAAGGGCCTTCTAATGATTGTGAGGTTTACAACAAGTGTGGTAGTTTCTCAGCTTGTGATATTAGTTCAGGTTCACCTGTTTGTAAGTGCTTAAGAGGGTTTCAACAAAGAGGTGGTGTTGGTGGTGGGTGTAAGAGGGTGACACCACTCAAAGCTGAAAAGACAACCTCTCAGGTCGGTGTCAAAGAAGATGGATTCAAGAGGCATCGCTGCTTGAGGCTGCCGGATTTTGCACAGCAAGGAAACCCGGTTGGCGCCGAGAACTGCGAGAGCTTTTGCTTGCAGAATAGTTCTTGCACTGCTTATGCTGAAGTTAGTGGGATTGGGTGCATGGTTTGGTATGGGGAGTTGGTTGATCTTCAAGATTTTAGAGGAAATGTAGGAGAAACACTTTTCATTCGTTTAGCTGCTTCTGATTTAGAAGATGGAGGGAAAAAGAACAAGGTTGTGATAGTAACAGCTATTATAGCAGGATTAATCTCTATAGGGATTTTTGTATTTATAGTATGGAGGTGCAAGGCAAAACTCAAACTCAAAGTTTCGTCCGCTTCATGTCGCAAGAATAGTGATGTAATACCAATTTATGATGCAAGCAAGAGTAAAGAGATGTCCACAGAATTTTCAGCATCAGCTGATCTTAGTTTGGAGGGTAATGAGCTAAGTGGACCAGAACTTCCACTTTTCAATTTTAATTGCATTTCCATAGCCACAGACAACTTTTCACAAGGAAATAAGCTTGGGGAAGGGGGTTTCGGTCCTGTTTATAAGGGAAAGCTTCCAAGTGGAGAACAAATAGCTGTCAAAAGGCTTTCAAGACATTCCTGCCAAGGTTTGGAGGAGTTCAAGAATGAAATGATGCTGATAGCCAAACTACAACACAGAAATTTGGTTAGACAAATGGGTTGCTCTATTCGAGGTGAAGAAAAATTGCTTGTATATGAGTACATGCCGAACAAAAGCTTGGATCGCTTTTTATTTGATCCGGTCAAGCAAACACAGTTAGACTGGGCAAGACGCTATGATATCATTGAAGGCATTGCAAGAGGACTACTTTATCTACATCGAGATTCAAGACTAAGAATAATTCATCGAGATCTAAAAGCAAGCAATATTTTATTGGACGAAAACATGAACCCAAAAATCTCAGACTTCGGGCTGGCCAGGATATTTGGTGGAAACCAGAACGAAGGCAATACAACCAGAGTGGTTGGTACATATGGTTATATGGCTCCAGAATATGCAATGGAAGGTCTATTTTCAGTTAAATCCGATGTATATAGTTTTGGTGTATTACTTTTAGAGATTGTGAGTGGTCGGAGGAACACTAGCTTTCGTCACTCGGATGACACAAGTCTCATTGGATATGCATGGCATCTTTGGAATGAAGGCAGAGCAATGGAGCTTGTAGACCCTTGCATACGTGAATCAAGTCCTAAAGACAAAGCCTTGAGGTGCATAAACATAGGAATGTTGTGTGTGCAAGATTCAGCATCTCATAGACCAAACATGTCCAATGTAGTGTTGATGCTAGAAAGTGAGACAACCACTCTTCCATTACCTTCACAACCTTTGGTCACTTCCATGAGGAGATCTGAGGACAGAGAATTTCATATGGAAGGTCTTGATGTTTCAAATGATTTAACTGTCACAATGGTGGTTGGAAGATAG 2535 0.4233 MATVFYQHVSILFLLCFFFFLCFCAMFSAAAARSSITTAQFIRNRDNLISDGNNFEMGFFTYDNYNNTYVGIWYYTIPQPYVIWVANRDYPVKGDGGAITIQQDGNLVIFDGQKRKVWSSNVTISANNKTTEAVLGDDGNLVLTLTDSRKKVWQSFEDPSDTYLPGMKVPANPSKGKNNFVFTSWKSAKDPSPGKYTMGVDPESLPQIVVWEAGERRWRSGYWNGGVFTGVDMTGSVLNGFTINKGDKSSYFSYSVPNGSDKVRFQITWDGYEKDLKWDPSQKQWNETQKGPSNDCEVYNKCGSFSACDISSGSPVCKCLRGFQQRGGVGGGCKRVTPLKAEKTTSQVGVKEDGFKRHRCLRLPDFAQQGNPVGAENCESFCLQNSSCTAYAEVSGIGCMVWYGELVDLQDFRGNVGETLFIRLAASDLEDGGKKNKVVIVTAIIAGLISIGIFVFIVWRCKAKLKLKVSSASCRKNSDVIPIYDASKSKEMSTEFSASADLSLEGNELSGPELPLFNFNCISIATDNFSQGNKLGEGGFGPVYKGKLPSGEQIAVKRLSRHSCQGLEEFKNEMMLIAKLQHRNLVRQMGCSIRGEEKLLVYEYMPNKSLDRFLFDPVKQTQLDWARRYDIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDENMNPKISDFGLARIFGGNQNEGNTTRVVGTYGYMAPEYAMEGLFSVKSDVYSFGVLLLEIVSGRRNTSFRHSDDTSLIGYAWHLWNEGRAMELVDPCIRESSPKDKALRCINIGMLCVQDSASHRPNMSNVVLMLESETTTLPLPSQPLVTSMRRSEDREFHMEGLDVSNDLTVTMVVGR 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00480 844 ProSiteProfiles Bulb-type lectin domain profile. 33 156 IPR001480 -
Arst10g00480 844 SMART blect_4 39 159 IPR001480 -
Arst10g00480 844 CDD PAN_AP_plant 349 425 - -
Arst10g00480 844 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 491 604 - -
Arst10g00480 844 Gene3D Phosphorylase Kinase; domain 1 505 604 - -
Arst10g00480 844 SUPERFAMILY alpha-D-mannose-specific plant lectins 82 191 IPR036426 -
Arst10g00480 844 ProSitePatterns Serine/Threonine protein kinases active-site signature. 650 662 IPR008271 GO:0004672|GO:0006468
Arst10g00480 844 SUPERFAMILY Protein kinase-like (PK-like) 514 824 IPR011009 -
Arst10g00480 844 Pfam Protein tyrosine and serine/threonine kinase 531 797 IPR001245 GO:0004672|GO:0006468
Arst10g00480 844 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 17 790 - -
Arst10g00480 844 Gene3D - 28 156 IPR036426 -
Arst10g00480 844 Pfam S-locus glycoprotein domain 218 325 IPR000858 GO:0048544
Arst10g00480 844 CDD B_lectin 48 159 IPR001480 -
Arst10g00480 844 SMART serkin_6 529 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g00480 844 PIRSF SRK 5 844 IPR024171 GO:0004674
Arst10g00480 844 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 28 156 - -
Arst10g00480 844 Pfam D-mannose binding lectin 82 186 IPR001480 -
Arst10g00480 844 Gene3D Transferase(Phosphotransferase) domain 1 605 807 - -
Arst10g00480 844 SMART ntp_6 350 424 IPR003609 -
Arst10g00480 844 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 605 807 - -
Arst10g00480 844 CDD STKc_IRAK 535 800 - -
Arst10g00480 844 ProSiteProfiles Protein kinase domain profile. 529 814 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g00480 844 Pfam PAN-like domain 351 409 IPR003609 -
Arst10g00480 844 ProSiteProfiles PAN/Apple domain profile. 350 425 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00480 Arst-Chr10 3873491 3877411 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00480 432 812 Receptor kinase-like Gene Family AT4G23230 52.880 7.07e-131 403
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Arst10g00480 PK_Tyr_Ser-Thr 3.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00480 - - gmx:102660295 1138.64