Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00478 ATGCACATACCAGTTTTGCTGCTACTAACACTTAGCTTCTGCCATGTTGCGAATTCCTTATTAGACACCATAACCTCCTCAAATTACATCCTTAAGGACCCTGAAACCTTAAGCTCCAACAACACTTTGTTCCACCTAGGATTCTTCACCCATTCTAACTCATCAACCTTGTCCTACCTCGGAATTTGGTACATGTCCAAATCCTCTGTGGTCTGGGTTGCCAACAGAAACCAACCTATAAAGGATTCTTCTTCAGGGCATCTCAAAATATCTGAGGATGGAAACCTTGTTGTCATGAACCAACAGAAGCAGATTCTTTGGTCAACAAACATCACAAATATTACATCCAACACAACGGCACAGCTTCAGAACACCGGAAACCTTGTGTTGCAAGAAATCACCACAGGAAGGATCCTTTGGCAGAGTTTCCAGCACCCTGCAGATACTTTCTTGCAGAAAATGGAGCTTAGCACCAATGAGATTACCGGCCAGAGAGTGAAACTCACCTCATGGAGAACTCCTAATGATCCATCCATAGGAGACTTCACTATGAGTCTTGAACCCCTTAACATCCCTCAAGTGTTCATATGGAGAGGCACTCAACCTTATTGGCGAAGCGGTCCATGGAACGGTCAAGTTTTTATTGGGATACCTACTATGAACACAAACTATCTTGACGGGTTCTCCTTAGATGGTGAAGGTCAAACCAACGGCACTTACTACCTCTCATACAACTATGCGAATGTGTCAATGATGTATGTGTTGAGTTCTGATGGAAACTTTCACGAAACCTATTGGGATTATGCAAAGAGAGATTGGATTGTGGACTGGTCTGCTGTAAGCTCTGTGTGTGATGTTTATGGAGAGTGTGGTCCCTTTGGAAGCTGTGATCCTAAAAATTCACCTATTTGCAGCTGTTTGAGAGGGTTTGAGCCAAAGAATGCTCAAGAGTGGAATAAACAAAACTGGAGCAGCGGTTGTGTGAGGAAGAAGCCTCTGCAGTGTGATGAGAGAGTTAGAAATAATGGAAGTAGTGATGGGTTTGTGAAGCTGCAAAATGTCAAGGTTCCAGATTTTTCACAGTGGTTGTCTTCCATTGCTTATGATTGCAGAACTGAATGCTTGGCAAATTGCTCTTGCATTGCATATGCTTATGATTCTGGCATTGGCTGCATGTTATGGTGTGGAAACTTGATTGACATACAGCAGTTCTCAATGGGAGGAATTGATCTTTACATTCGAGTTCCCTCTTCGGAACTTGAGAAGAAAAATCACACACTGATCATAGTTCTTTCGGTCATAATAGCAATGGCTCTTGTTGTGGCTTGTGCATATATCTTGAGGAAAAGGGCAATCAGAGGAGTGAAAGCACTTCAAAGAATTCAGAGAAGAAGTTATCTTAATGATACAAGTCAAGTTGAACTTCCGGAGAATTCACTATTTGAGCTTGAAAAGCTTGCTACTGCAACAAACAACTTCCACTCCAATAATAAGCTAGGACAAGGTGGTTTTGGATCTGTATATAAGGGTAGATTGGAAGATGGACAGGAGATAGCAGTTAAAAGACTTTCAAAAACATCTGGACAAGGTGTAGAAGAATTTATGAATGAAGTTATGGTAATATCAAAACTTCAACATCGAAATCTTGTCAGACTTCTTGGATGTTGCATCGAAAGAGATGAAAAGATTTTGATCTATGAATACCTACCAAACAGAAGTTTGGATGCACATATATTTGATCCGCCTAAACAAAAGGTATTAAATTGGGAAAAACGTTTTAACATACTCGAAGGAATCGCTCGAGGTTTACTTTATCTTCACAGAGATTCTAGATTAAAGATTATACACAGAGACTTGAAATTAAGTAATATATTGTTAGATGACGAGTTAAATCCGAAAATATCAGATTTTGGTATGGCAAAAATTTTTGAGAATACTGAAAATGAGGCCAATACGAGAAGAATTGTTGGAACGTTTGGTTATATATCACCAGAATATGCTCTACAAGGACTATTTTCAGAAAAATCAGACGTATTTAGTTTCGGAGTTTTACTTTTGGAGATTATTAGTGGCAGAAAAAATAGCAGCTTTTATGAGAATGTTGAATCTTTGAGCCTTTTGGGGTTTGCATGGAAATTGTGGAGAAATGACAACATAGCATCACTAATAGATCCAGAAATATCAAATCCAAGCAATAAAGAAGACATAACGAGGTGCATACATATTGGTCTTTTGTGTGTACAAGAACTTGCAAGCTATAGGCCTACTATGCCTGCAGTAATTTCGATGCTTAATAGTGAGACTGTTAATCTTCCTCCTCCCAAACAGCCAGCATTCATTCAAATACAGACTATGATAGATGTAGAGTCTTCTCTTAGAAATGATGGAGCATGTTCCATCAATTACATGAGTCTAACAAACATCCAAATCAAATCAAGCAAAACCAGATCTTCCTCCACTCTCAAAACACATTCATTCATTCATCTCTCAATGATGGTTATGGGACTAAGTAGTCACTTTATAAACACACAAGTTTTGATAACACTTTGCTTTAGTTTCTTCCTACATGATGCTGGAAGTTCCATAGACACCATCACCTCCTCTTACATCCTTAAAGCCCCCGAAACTTTAAGCTCTAATGATGGTATGTTCCATCTAGGATTCTTCACCCCTACCAACTCCACCTTTTCCTACCTCGGAATCTGGTACATAATCAAACCTCCTTTGGTGTGGGTTGCCAACAGAGACCAACCAATAAAGGATTCTTCTTCTTCTTCCTCTGGTGTGCTCAAGATATCTAAAGATGGAAACCTTGTTGTGCTGAATTCACAAGATGACATCCTTTGGTCTACAAATGTGTCCAATATTTCATCTAACACAACGGCTAAGCTTCTGAACACCGGAAACCTTGTGCTGCAAGAAAACGCGACAGGAAGGATCCTATGGCAGAGTTTCCAACACCCCACAAACGCTTTCTTGCAGGGAATGGAACTCAGCACCGGTAACATCAGCGGCGGCCAGAGAACAAAACTCACCTCGTGGAAAAGTGATGAGGATGCATCCATTGGGGAATTCTCAATGAGTCTTGAACGCCTGAATATCCCGGAAGTGTTGGTGTGGAGAGGGAGCCAACCTCACTGGCGTAGTGGTCCATGGAATGGTCAAATATTTCTGGGGATACCTGACATGGCAACCAACTATCTTTTCGGGTTTTACTTAAGTCAAGATAACGGCAATACTAATTACTATCTTGCTTACAACTACGGAAATCATACTTTTCCTGTATACTACTTATTAAGTGTTGATGGAAATGTATACGAAGTATCTTGGGATCCTGAAAAGAGAGATTGGTATATCTCCTGGTTAGCTATAAATTCAGAGTGTGATGTGTATGGCAAGTGTGGAGAGTTTGGAATCTGTGATCACATGAGCTCTCCAATTTGCAGGTGTTTGAGAGGGTATAAGCCAAGGAATGATGAGGAATGGAGCAAACAGAACTGGAGCAGCGGTTGTGTTAGGAAGGAACCTTTTCAGTGTGAGAGTGAGAGTGTCAAAAATAACAAACAAGATGGATTTGTGAAGATGCAGAATGCCAAGGTTCCAGCCTCTATCTTGTGGTCGTATGCTGCTGAGGACGATTGCAAAGCTGAGTGCTTAGGCAACTGCTCCTGCACAGCATATGCATATGATGCTGGCACTGGCTGCATGTCATGGATTGGAAGCTTAATTGATCTTCAGCTATTCTCAACTGGAGGAACTGATCTTTACATTCGAGTTCCCTATGCAGAGCTAGGTGAAGACAAAAAAAATGTCACAGTGGTCATTGCAGTGTCAGTGATAGTAGGGACCACTATCATTCTCACCTGTGCTTATATCTTCTGGAAAAGGATTCAAATCAGAGAGAGAGTGAAAAACAAACTAAGGAGAGAAGACAATGACCTAGTAAAACTCCCAGAGCTTTCCCAATTTGAGTTTGAAAGACTTGTTGCTGCAACAAATAACTTCAATCTATCTAATAAGCTAGGAGAAGGAGGTTATGGACCAGTATACAAGGGAACATTGGAAGATGGACAGGAAATAGCAGTGAAAAGGCTTTCAAGATCATCCGGGCAAGGATATGAAGAATTTATGAATGAGGTTATGGTAATATCAAAGCTTCAACATCGTAATCTTGTTAGACTTTTTGGATGTTGTATAGAAGGAGAAGAGAAGATTTTGATCTACGAGTACATGCCAAACAAAAGTCTAGATGCATATATGTTTGATCAATCAAACCAGATACTGAATTGGGAAAAACGTTTTAGTATAATCGATGGAATAGCTCGGGGTTTACTTTATCTTCACAGAGATTCTAGACTGAGAATTATACATAGAGATTTGAAGTTGAGTAACATACTGCTTGATGAAGAGTTAAATCCAAAAATTGCGGATTTTGGCCTGGCAAAAATTTTTAGTCGAACCGAAGATGCAGTCAATACTAGAAGAGTTGTTGGAACATACGGCTATATGTCACCAGAATATGCTATGGAAGGACTATTTTCAGAGAAATCTGATGTATTTAGCTTCGGTGTTTTGCTGTTGGAGATTGTGAGTAGAAGAAAAAATACCAGCTTTTGTGAAGATTCTAAATCTTTGAGTCTCTTGGGATTTGCATGGAATTTATGGAATGCTGATAACACTGCATCTCTAATAGATCCAGAAATATCAAGTTCATGCAACAAAGAAGATATAAAGAGGTGCATACATATTGGTCTTTTGTGTGTGCAAGAACTTGCAAGAGATAGGCCTACAATGACTGCAGTGGTTTCAATGCTTAATAGTGAGACTGTTAATCTTCCTTCTCCCAAGCAGCCAGCATTCGTTCAGAGGCAGACTCTGCTGGATATAGAGTCTTCTATGACAAGTGATGGATTATGCTCCATTAATAATGTGAGCCTAACAAATGTCCAAGGAAGATAA 4959 0.3987 MHIPVLLLLTLSFCHVANSLLDTITSSNYILKDPETLSSNNTLFHLGFFTHSNSSTLSYLGIWYMSKSSVVWVANRNQPIKDSSSGHLKISEDGNLVVMNQQKQILWSTNITNITSNTTAQLQNTGNLVLQEITTGRILWQSFQHPADTFLQKMELSTNEITGQRVKLTSWRTPNDPSIGDFTMSLEPLNIPQVFIWRGTQPYWRSGPWNGQVFIGIPTMNTNYLDGFSLDGEGQTNGTYYLSYNYANVSMMYVLSSDGNFHETYWDYAKRDWIVDWSAVSSVCDVYGECGPFGSCDPKNSPICSCLRGFEPKNAQEWNKQNWSSGCVRKKPLQCDERVRNNGSSDGFVKLQNVKVPDFSQWLSSIAYDCRTECLANCSCIAYAYDSGIGCMLWCGNLIDIQQFSMGGIDLYIRVPSSELEKKNHTLIIVLSVIIAMALVVACAYILRKRAIRGVKALQRIQRRSYLNDTSQVELPENSLFELEKLATATNNFHSNNKLGQGGFGSVYKGRLEDGQEIAVKRLSKTSGQGVEEFMNEVMVISKLQHRNLVRLLGCCIERDEKILIYEYLPNRSLDAHIFDPPKQKVLNWEKRFNILEGIARGLLYLHRDSRLKIIHRDLKLSNILLDDELNPKISDFGMAKIFENTENEANTRRIVGTFGYISPEYALQGLFSEKSDVFSFGVLLLEIISGRKNSSFYENVESLSLLGFAWKLWRNDNIASLIDPEISNPSNKEDITRCIHIGLLCVQELASYRPTMPAVISMLNSETVNLPPPKQPAFIQIQTMIDVESSLRNDGACSINYMSLTNIQIKSSKTRSSSTLKTHSFIHLSMMVMGLSSHFINTQVLITLCFSFFLHDAGSSIDTITSSYILKAPETLSSNDGMFHLGFFTPTNSTFSYLGIWYIIKPPLVWVANRDQPIKDSSSSSSGVLKISKDGNLVVLNSQDDILWSTNVSNISSNTTAKLLNTGNLVLQENATGRILWQSFQHPTNAFLQGMELSTGNISGGQRTKLTSWKSDEDASIGEFSMSLERLNIPEVLVWRGSQPHWRSGPWNGQIFLGIPDMATNYLFGFYLSQDNGNTNYYLAYNYGNHTFPVYYLLSVDGNVYEVSWDPEKRDWYISWLAINSECDVYGKCGEFGICDHMSSPICRCLRGYKPRNDEEWSKQNWSSGCVRKEPFQCESESVKNNKQDGFVKMQNAKVPASILWSYAAEDDCKAECLGNCSCTAYAYDAGTGCMSWIGSLIDLQLFSTGGTDLYIRVPYAELGEDKKNVTVVIAVSVIVGTTIILTCAYIFWKRIQIRERVKNKLRREDNDLVKLPELSQFEFERLVAATNNFNLSNKLGEGGYGPVYKGTLEDGQEIAVKRLSRSSGQGYEEFMNEVMVISKLQHRNLVRLFGCCIEGEEKILIYEYMPNKSLDAYMFDQSNQILNWEKRFSIIDGIARGLLYLHRDSRLRIIHRDLKLSNILLDEELNPKIADFGLAKIFSRTEDAVNTRRVVGTYGYMSPEYAMEGLFSEKSDVFSFGVLLLEIVSRRKNTSFCEDSKSLSLLGFAWNLWNADNTASLIDPEISSSCNKEDIKRCIHIGLLCVQELARDRPTMTAVVSMLNSETVNLPSPKQPAFVQRQTLLDIESSMTSDGLCSINNVSLTNVQGR 1652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00478 1652 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1411 1613 - -
Arst10g00478 1652 ProSiteProfiles Bulb-type lectin domain profile. 22 143 IPR001480 -
Arst10g00478 1652 FunFam Liguleless narrow1 569 772 - -
Arst10g00478 1652 FunFam Os04g0303100 protein 62 203 - -
Arst10g00478 1652 Pfam Protein tyrosine and serine/threonine kinase 1336 1605 IPR001245 GO:0004672|GO:0006468
Arst10g00478 1652 Pfam Protein tyrosine and serine/threonine kinase 495 763 IPR001245 GO:0004672|GO:0006468
Arst10g00478 1652 SMART serkin_6 1335 1598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g00478 1652 SMART serkin_6 493 827 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g00478 1652 ProSiteProfiles Bulb-type lectin domain profile. 862 985 IPR001480 -
Arst10g00478 1652 SMART ntp_6 1187 1259 IPR003609 -
Arst10g00478 1652 SMART ntp_6 343 415 IPR003609 -
Arst10g00478 1652 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 858 985 - -
Arst10g00478 1652 Gene3D Phosphorylase Kinase; domain 1 454 568 - -
Arst10g00478 1652 Gene3D Phosphorylase Kinase; domain 1 1296 1410 - -
Arst10g00478 1652 ProSiteProfiles PAN/Apple domain profile. 1179 1260 IPR003609 -
Arst10g00478 1652 ProSitePatterns Protein kinases ATP-binding region signature. 499 521 IPR017441 GO:0005524
Arst10g00478 1652 SUPERFAMILY alpha-D-mannose-specific plant lectins 60 211 IPR036426 -
Arst10g00478 1652 CDD B_lectin 868 988 IPR001480 -
Arst10g00478 1652 Pfam S-locus glycoprotein domain 1047 1157 IPR000858 GO:0048544
Arst10g00478 1652 Pfam S-locus glycoprotein domain 204 314 IPR000858 GO:0048544
Arst10g00478 1652 SUPERFAMILY Protein kinase-like (PK-like) 1321 1631 IPR011009 -
Arst10g00478 1652 CDD STKc_IRAK 499 765 - -
Arst10g00478 1652 CDD PAN_AP_plant 332 416 - -
Arst10g00478 1652 Pfam Domain of unknown function (DUF3403) 1607 1652 IPR021820 GO:0004674
Arst10g00478 1652 ProSiteProfiles Protein kinase domain profile. 1335 1620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g00478 1652 SMART blect_4 28 146 IPR001480 -
Arst10g00478 1652 SMART blect_4 868 988 IPR001480 -
Arst10g00478 1652 Pfam PAN-like domain 343 401 IPR003609 -
Arst10g00478 1652 Pfam PAN-like domain 1186 1245 IPR003609 -
Arst10g00478 1652 ProSitePatterns Serine/Threonine protein kinases active-site signature. 614 626 IPR008271 GO:0004672|GO:0006468
Arst10g00478 1652 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1455 1467 IPR008271 GO:0004672|GO:0006468
Arst10g00478 1652 Pfam D-mannose binding lectin 909 1015 IPR001480 -
Arst10g00478 1652 Pfam D-mannose binding lectin 70 172 IPR001480 -
Arst10g00478 1652 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 457 568 - -
Arst10g00478 1652 CDD PAN_AP_plant 1176 1260 - -
Arst10g00478 1652 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 8 755 - -
Arst10g00478 1652 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 8 755 - -
Arst10g00478 1652 Gene3D Transferase(Phosphotransferase) domain 1 569 771 - -
Arst10g00478 1652 Gene3D Transferase(Phosphotransferase) domain 1 1411 1617 - -
Arst10g00478 1652 FunFam Os04g0303100 protein 903 1046 - -
Arst10g00478 1652 SUPERFAMILY alpha-D-mannose-specific plant lectins 899 1054 IPR036426 -
Arst10g00478 1652 ProSiteProfiles PAN/Apple domain profile. 335 416 IPR003609 -
Arst10g00478 1652 CDD B_lectin 28 146 IPR001480 -
Arst10g00478 1652 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1299 1410 - -
Arst10g00478 1652 ProSiteProfiles Protein kinase domain profile. 493 744 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g00478 1652 CDD STKc_IRAK 1341 1606 - -
Arst10g00478 1652 SUPERFAMILY Protein kinase-like (PK-like) 479 791 IPR011009 -
Arst10g00478 1652 Gene3D - 858 986 IPR036426 -
Arst10g00478 1652 Gene3D - 16 144 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00478 Arst-Chr10 3851069 3858010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00478 462 779 Receptor kinase-like Gene Family AT4G11530 57.585 6.23e-120 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Arst10g00478 PK_Tyr_Ser-Thr 1.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00478 - - adu:107468469 2223.36