Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00477 ATGGGGTCACTGGTTTTGCTACTAGCACTTTTTTCCACTTGCACTTCCTTGGACACCATCTCCTCTTCCTACATCCTTAATGCCTCCGAAACTTTAAGCTCCAGTAATGGTTTGTTCCACCTTGGATTTTTCACCCCTACTAACTCGTCAACCTTTTCATCCTACCTCCGTATCTGGTTCATGACCAAACCCTCTGTCGTATGGATTGCCAACAGAAACCAACCAATAACTGATTCTTCATCTTCTGGGCTGCTCAAGATATCAAAGGATGGAAACCTTGTTGTGATGAATTCAAAAAGTGTGGCCCTTTGGTCAACAAAAGCCTCCAATATTTCATCTAACACATTAGCTAAGCTTCTAAACAACGGCAACCTTGTGTTGCAAGAAAACTCCACAGGAAGGATCCTATGGCAGAGTTTCCAACACCCCACCAACACTTTCCTGCAGGGAATGGAACTCGGTACCGGTAACATTAGCGGGGAGAGAATAAAACTGACTTCATGGAGAAGCCCCCAGGATCCATCCATTGGAGAATTCTCAGTGAGTCTTGAACACCTGAATATCCCGGAAGTGATGATATGGAGAGGGAGCCAACCTCACTGGCGCAGTGGTCCATGGAATAGTCAAAAGTTTCTTGGCATACCTGACATGAGAAGCAACTTTCTTTCAGGGTTTTACTTAGGTGTGGAAGACATGGATAATGGAATTACTAATTACTATCTTGCTTACAACTACTCAAACAATCCTGATTCTGTATACTACTACATGTTGAGTGCTGATGGAAACCTACATGAAACATATTGGGATCATGAAAAGGGAGAATGGCTTGACTCGTGGTTAGCTATAAATTCAGAGTGTGATGTGTATGGCAAGTGTGGAGAGTTTGGAATTTGTGATTCCACGAGCTCTCCAATTTGCAGCTGTTTGAGAGGGTATAAGCCAAGGAATCCTGAGGAGTGGAATAAACAGAACTGGAGCAGAGGTTGTGTTAGGAAGGAACCTTTTCAGTGTGAGAATGAGAGTCTCAGAAATAATAAAGAAGATGGATTTGTGAAGTTGCAGAATGCCAAGGTTCCAGCCTCTATCAAGTGGTCGTCTACCGCGATTGGAAACGACTGCAGAGGCCAGTGCTTGGGGAACTGCTCCTGCACAGCATATGCATATGATGCTGGCACTGGTTGTATGGTGTGGACTGCAAACTTAACTGACATACAAAGCTTCTCAGCTGGAGGAATTGATCTTTACATTCGAGTTCCCAATTCAGAGCTTGGTGAAGACAAGAAAAATGTCACAGTGGTCATTGCAGTGCCAGTCATAGTAGGAGCTGCTATCATTCTCATCTGTGCTTATATCTTCTGGAAAAGGATTCAAATCAGAGAGAAAGCGAAAAACAAACCAAGGAGAAAAGACAATGACCTAGTGAAATTCCCAGAGCTTTCCCAATTTGAGTTTAAAAGACTTGTTGCTGCAACAAATAACTTTAATCTATCAAATAAGCTAGGGGAAGGAGGTTATGGCCCAGTATATAAGGGAACATTGGAAGATGGACAGGAAATAGCAGTTAAAAGGCTTTCAAGATCATCCGGGCAAGGATACGAAGAATTTATGAATGAGGTTATGGTAATATCAAAGCTTCAACATTTTAATCTTGTTAGACTTTTTGGATGTTGTATAGAAGGAGATGAGAAGATTTTGATCTATGAGTACATGCCAAACAAAAGTCTAGATGCATATATGTTCGATCAATCACAAATACTGAATTGGGAAAAACGTTTCAGTATAATTGAAGGAATAGCAAGGGGCTTGCTTTACCTTCACAGAGATTCTAGACTAAGAATTATACATAGAGATTTAAAGATGAGTAACATATTGCTTGATGAAGAGCTGAATCCAAAAATTGCCGATTTTGGCATGGCAAAGATTTTTACACGGACTCAAGATGTGGTCAATACTAGAAGGGTTGTTGGAACATACGGTTATATGTCACCAGAATACGTTATACAAGGACTATTTTCGGAAAAGTCTGATGTATTTAGCTTTGGTGTTTTACTGCTGGAAATTGTTAGTAAGAGAAAAAATAGCAGCTTTTATGAAGATGCTGAATCTTTGAATCTTTTAGGATTTGCATGGAATTTATGGAATGCAGATAACATTGCATCTCTTATAGATCCAGAAATATCAAGCTCATGCAACAAAGAAGACATAATGAGGTGCATACATATTGGTCTTTTATGTGTACAAGAGCTTGCAAGAGATAGGCCTACAATGACTTCAGTGATTTCAATGCTTAAAAGTGAGACAATCAATCTTCCTCCTCCAAAACAGCCAGCATTCATTCTAAGGCAGACTATACTTGATATAGAATCTTCTCTTACAAATAAGGAATTAGGCTCTATCAATAATGTGACCCTAACAAATATTCAAGGAAGATAA 2433 0.3999 MGSLVLLLALFSTCTSLDTISSSYILNASETLSSSNGLFHLGFFTPTNSSTFSSYLRIWFMTKPSVVWIANRNQPITDSSSSGLLKISKDGNLVVMNSKSVALWSTKASNISSNTLAKLLNNGNLVLQENSTGRILWQSFQHPTNTFLQGMELGTGNISGERIKLTSWRSPQDPSIGEFSVSLEHLNIPEVMIWRGSQPHWRSGPWNSQKFLGIPDMRSNFLSGFYLGVEDMDNGITNYYLAYNYSNNPDSVYYYMLSADGNLHETYWDHEKGEWLDSWLAINSECDVYGKCGEFGICDSTSSPICSCLRGYKPRNPEEWNKQNWSRGCVRKEPFQCENESLRNNKEDGFVKLQNAKVPASIKWSSTAIGNDCRGQCLGNCSCTAYAYDAGTGCMVWTANLTDIQSFSAGGIDLYIRVPNSELGEDKKNVTVVIAVPVIVGAAIILICAYIFWKRIQIREKAKNKPRRKDNDLVKFPELSQFEFKRLVAATNNFNLSNKLGEGGYGPVYKGTLEDGQEIAVKRLSRSSGQGYEEFMNEVMVISKLQHFNLVRLFGCCIEGDEKILIYEYMPNKSLDAYMFDQSQILNWEKRFSIIEGIARGLLYLHRDSRLRIIHRDLKMSNILLDEELNPKIADFGMAKIFTRTQDVVNTRRVVGTYGYMSPEYVIQGLFSEKSDVFSFGVLLLEIVSKRKNSSFYEDAESLNLLGFAWNLWNADNIASLIDPEISSSCNKEDIMRCIHIGLLCVQELARDRPTMTSVISMLKSETINLPPPKQPAFILRQTILDIESSLTNKELGSINNVTLTNIQGR 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00477 810 Gene3D Transferase(Phosphotransferase) domain 1 570 770 - -
Arst10g00477 810 Gene3D Phosphorylase Kinase; domain 1 455 569 - -
Arst10g00477 810 CDD PAN_AP_plant 334 419 - -
Arst10g00477 810 ProSitePatterns Serine/Threonine protein kinases active-site signature. 613 625 IPR008271 GO:0004672|GO:0006468
Arst10g00477 810 ProSiteProfiles PAN/Apple domain profile. 337 419 IPR003609 -
Arst10g00477 810 CDD STKc_IRAK 500 764 - -
Arst10g00477 810 SUPERFAMILY alpha-D-mannose-specific plant lectins 57 174 IPR036426 -
Arst10g00477 810 SMART ntp_6 345 418 IPR003609 -
Arst10g00477 810 SUPERFAMILY Protein kinase-like (PK-like) 480 787 IPR011009 -
Arst10g00477 810 ProSiteProfiles Bulb-type lectin domain profile. 17 140 IPR001480 -
Arst10g00477 810 Pfam Protein tyrosine and serine/threonine kinase 495 763 IPR001245 GO:0004672|GO:0006468
Arst10g00477 810 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 570 771 - -
Arst10g00477 810 ProSiteProfiles EGF-like domain profile. 282 318 IPR000742 -
Arst10g00477 810 ProSiteProfiles Protein kinase domain profile. 494 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g00477 810 SMART serkin_6 494 756 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g00477 810 Gene3D - 13 141 IPR036426 -
Arst10g00477 810 CDD B_lectin 23 143 IPR001480 -
Arst10g00477 810 Pfam Domain of unknown function (DUF3403) 765 810 IPR021820 GO:0004674
Arst10g00477 810 Pfam D-mannose binding lectin 66 169 IPR001480 -
Arst10g00477 810 Pfam S-locus glycoprotein domain 201 315 IPR000858 GO:0048544
Arst10g00477 810 Pfam PAN-like domain 344 404 IPR003609 -
Arst10g00477 810 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 457 569 - -
Arst10g00477 810 SMART blect_4 23 143 IPR001480 -
Arst10g00477 810 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 5 753 - -
Arst10g00477 810 PIRSF SRK 1 810 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00477 Arst-Chr10 3843681 3846922 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00477 429 778 Receptor kinase-like Gene Family AT4G23230 54.261 1.14e-127 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Arst10g00477 PK_Tyr_Ser-Thr 8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00477 - - ahf:112714694 1614.36