Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00454 ATGGGCTACGATGAACAACTCAAACCGTGCCGGAATAACTTGCCGGAATCCTCCAATCCCCGGCGAGTCGTCAACCTTATTTCATCCCTAATCTCCCTCTCCCTCTCGATTAGGGTCTTCGCCGGAAAATGGCAACTGATTCGCAACAAGCTCGAGGAGCTGTACTCCGGTCTAGTCGGAGCCGACGACGACCCTTCACTCTCCGGCGTTCTCCCTGCGATCCTCTCCACCGCGGAGGAGTGTTCCGACCTAGCTCGCCGCTGCACCGATCTGACATACAGCGGGAAGCTTCTTATGCAGAGCGACTTAGAGGTGGTTTTCGCGAAGCTCCATTGCCATGTGAAGAAGCTGTCTGAGATGTACACGAAGGGTGTTCTCACACACAGCTACGCTCTGGTGGTCTCGAAGCCTGGACTTGGAGCTTCCAAAGAGGACATGAGGTTCTTCGTGAGGGACCTACTCACCAGAATGAAGGTTGGCGATGTTGGTATGAAGAAGCAGGCATTGATCAACCTCCACGAAGTTGCTTCCGAAGACGACAAGTACGTGAAGGTGATTGTTGAAGTCGGTGACGTTGTTCATGTTCTGGTTGATTTTCTAGGGTCCTCTGAGTTGGAGATTCAACAAGAGTCTGCAAAGGTAGTTTCTTTGATTGCGGGGTTTGATTCTTATAAAGGAGTTCTTGTTGGCGCTGGCGTTGTTGCGCCTTTGGTTAAGGTTTTGGAGTGTTCAAGTGAGACTGGCAAAGTTGCTGCTGCCTTGTGTCTGCAGAGTTTGACTGAGAATTCCGATAATGCTTGGTCGGTTTCCGCTCACGGCGGCGTGACGGCGTTGTTGAAGATTTGTGGCGGTGTAGATTGCAGAGCAGAATTGGTTTGTCCTGCTTGTGGAGTTCTGAGGAATCTGGTTGGTGTTGAAGAGATTAAGAGGTTCATGGTTGATGAAGGTGCGGTTTCAAGCTTCATTAGGCTTATGAGGTCAAGGGACGAAGCGATTCAGGTGAGTTCCATTGAGTTTCTTCAGAGTATTGCATCCGGAGATGAGTCATTGGTTAAGCAGATTGTTGTTAGAGAAGGGGGGGTTCGTGTTTTGCTGCGACTTTTGGATCCTAAATGGCCTTGTTCTTCCAAAACAAGAGAGGTAGTGATGAGGGCTATTGAGAATTTGTTCTTCTCTTGGTCTAGTTGTGTCACTATTTTGATGAGCTATGGTTTTGTGGATCAATTGATGTACTATATTCGAAACGGCGACGTTTCTGTTCAAGAATTGGCTCTCAAAGTGGCGTTTAGATTGTGTGGAACATGTGAAGATGCTAAGAAAGCTCTAGGTGATGCTGGATTCATGGCAGAGCTTGTTAAGTTTCTAAATGTGAAATCATTCGAGGTTCGAGAAATGGCGGCGGAGGCACTCTCCGGGATGGTTATGGTTGCCAAGAACAGGAAGAGGTTTGTGCAAGATGATGAAAGCATTGCTCTTCTTCTGCAGTTGTTGGATCCAGAGGAGGGGAATTCAGGTAACAACAAGTTCTTGATCTCTGTATTGATGTCATTGACGCATTGCAACAGTGGGAGGAAGAAGATTGTGAGTTCTGGGTATGCAAAGAACATAGAGAGGCTTGCATCAGAATCTCAAGTTTCTTCTGCTGACGCAAAGAGACTTGTCAGGAAGCTATCCACCAATACATTCCGCACCATGCTCAGTGGAATCTGGCACCACCACCACCACCACCACTCTTGA 1737 0.4807 MGYDEQLKPCRNNLPESSNPRRVVNLISSLISLSLSIRVFAGKWQLIRNKLEELYSGLVGADDDPSLSGVLPAILSTAEECSDLARRCTDLTYSGKLLMQSDLEVVFAKLHCHVKKLSEMYTKGVLTHSYALVVSKPGLGASKEDMRFFVRDLLTRMKVGDVGMKKQALINLHEVASEDDKYVKVIVEVGDVVHVLVDFLGSSELEIQQESAKVVSLIAGFDSYKGVLVGAGVVAPLVKVLECSSETGKVAAALCLQSLTENSDNAWSVSAHGGVTALLKICGGVDCRAELVCPACGVLRNLVGVEEIKRFMVDEGAVSSFIRLMRSRDEAIQVSSIEFLQSIASGDESLVKQIVVREGGVRVLLRLLDPKWPCSSKTREVVMRAIENLFFSWSSCVTILMSYGFVDQLMYYIRNGDVSVQELALKVAFRLCGTCEDAKKALGDAGFMAELVKFLNVKSFEVREMAAEALSGMVMVAKNRKRFVQDDESIALLLQLLDPEEGNSGNNKFLISVLMSLTHCNSGRKKIVSSGYAKNIERLASESQVSSADAKRLVRKLSTNTFRTMLSGIWHHHHHHHS 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00454 578 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 13 571 - -
Arst10g00454 578 SMART arm_5 221 261 IPR000225 GO:0005515
Arst10g00454 578 SMART arm_5 435 475 IPR000225 GO:0005515
Arst10g00454 578 SMART arm_5 305 345 IPR000225 GO:0005515
Arst10g00454 578 SMART arm_5 179 220 IPR000225 GO:0005515
Arst10g00454 578 SMART arm_5 262 304 IPR000225 GO:0005515
Arst10g00454 578 SMART arm_5 347 391 IPR000225 GO:0005515
Arst10g00454 578 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 316 360 IPR000225 GO:0005515
Arst10g00454 578 SUPERFAMILY ARM repeat 143 541 IPR016024 -
Arst10g00454 578 Gene3D - 149 578 IPR011989 -
Arst10g00454 578 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 273 317 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00454 Arst-Chr10 3711951 3714177 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00454 150 424 U-box Gene Family AT2G23140 24.731 1.30e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00454 - - gmx:100783537 790.801
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g04324 3 118599514 118601911 Arst10g00454 10 3711951 3714177 PCT