Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00445 ATGACAGAAACTTGGTTAAGTTCTGTTTTTGAAGAAGGGAGATTCTGTGAAATCTTTCACTCAAATGCATCTGGTTGGAGGACTTGTGAGACTTGTAGGAAGCGGATTCATTGTGGATGTATTGTTTCAAGTCATGCCTTTATGTTGTTGGATCCTGGAGGAATTGAGTGCCTTGCATGTGCCCGCAAACATATGGTTTTGCCATCTAACTCGCCATGGCATCAATCTTTCTCCCTTCAAAATCGTTTACCAGAAAGAATTAGAGACATGTCTGGAAAAAATTGGAGTCAATTAGCTGGATCAGGTCCTGTTCCATGGAAACAAGCACCGAGTTTGTTCAACTCAGTTTCTTCATCTGACTTACATCCAGATGTGCCATCCCTAGTTGAATTGTCTAATAGCATTGACAAAAGGTATGTCATTGAAAGGTTACCTGCCTCGACCATGGAAAAGAAAAATGACGATTTGTCTGGAATATCTGTTAACTGGAGTGTAAAGCTTGGTACCCGGGAAACGATGTTTATGAATGACCTTGCAGGAATAAGGAATGATGACAAACCAAGTTCAGGTTTAAATATGTGCCAGCAGCCTCCATCTCTGAAGGAAGATTCATCTTCTCAACCATTTGGTATGTCTATACCTTATGCATCTGCAAATGAAAGAAATGGTCAAATTGGAGTGACAGGAAGTCATTCGCAACAAATACAAACTCCCCCAGGAAAACATTTCAGTGGTCTTATGCAATTAGCGCTTGACTCGTCAAGTGAAGCTCTGGTTCGTAATGGACGGCCTCGGGCAGATGCCCGAGGAAGAAACCAGTTATTGCCACGGTACTGGCCCAGGTGTACTGATCTAGAGCTACAACAAATATCTATAGATTCTAATTCAGTAATCACTCCCTTGTTCCAAAAAACCTTGAGTGCCAGTGATGCTGGGAGAATTGGGCGTTTAGTGCTACCAAAAAAGTGTGCCGAGGCCTACTTCCCACCAATTTCTCAGCCTGAAGGATTGCCACTTAAAATCCTTGATGCAAAAGGCAAGGAATGGATATTTCAATTTCGCTTCTGGCCAAACAATAATAGCAGGATGTATGTTTTAGAGGGTGTCACTCCTTGCATACAGTCAATGCAGTTGCAAGCAGGTGACACAGTAACATTTAGTCGATTGGAGCCAGAAGGGAGGTTGGTTATGGGATTTAGAAAGGCTTCAAATGCCACGCCATCTGATCAGGACAATGAAACAAATAAGAATGGAAATGGATTTTCTGCACCTGGTGAAGTTGAGTTGGCTGATCCTAGTTCATGGTCTAAAGTTGATAAATCTGGCTACATAGCAAAAGATGCATTGGGGAGCAAATCTTCAATGCCTAGAAAGAGAAAGCTCAACATCTTGGGTTCAAAAAGTAAACGTCTAAAAATTGAAAGTGAGGATATGATAGAGCTGAAGATTACGTGGCAAGAAGCTCAAGGCCTGCTCCGTCCCCCTCCTAGCCATGTCCCAAGTATTGTTGTGATTGAAGGTTTTGAATTTGAGGAATATGAGGATGCTCCGGTGCTTGGAAAGCCTACAATTTTCACAGATGATAATACGGGTGAAAAGGTCCAGTGGGCTCAGTGCGAAGATTGTCTCAAATGGCGTAAATTGCCAGCAAGTGCACTTCTTCAATCAAAATGGACATGTTCAGATAATTCATGGGATCAAGAAAGATCTTCATGTTCGGCTGCTCAAGAGATGACAACAGAAGAGATTGAGAATTTGCTTCCACCTTGTAATTCAGGTGCTTCCAACAAAATGAAGGCTACCAAGCAGGAATCTGATAATGCTGAAGCTTTGGAGGGACTTGACACACTCGCAAATTTAGCTATTTTGGGAGAGGGTGAGTCACTCCCTACGTCTGCCCAGGCCACTACTAAACACCCGCGTCATAGGCCGGGCTGCTCATGTATTGTTTGCATTCAACCTCCCAGTGGAAAGGGCCCCAAGCATAAGCAGTCATGCACATGTAATGTCTGCTTAACGGTGAAGCGTCGATTTCGGACTCTAATGTTACGACGTGAAAAGAAACAATTTGAGAAGGAAGCAGAGACTACACGTAAAAAGCAAAAGCAACCACATTCTCAACCATTACATTCATCCGAAATTTTTCTTGAGGATGATTCCTTGCCTTGTAGTAACCCTGTTGACAGTAGTAGTCCAAATCAAAATAAGGAAGGCAACGAGGTTTCTGATGAAGATCCAAACCAGGTAAAATCATCTACCTCACCTTTTAAAGGCCAAATCGACCTGAATATCCAGCCAGAACGGGAAGAAGAGTCATCTCCCGGTTCAGATTCCGGTGGCATGATGAAATCGCTCCACAATGCTGTTGAGAGGTGTACCAAACCGACATTGAACAGCGGTATTGGAGATACATCTGGAAGTCAGTCACGTCAGGTTGCGGATGGAGTCAGGGAAGATCAACTTAGCAATGGTGTAGCTCTCGGCAGTAGTAGTCATGGTAGCAAGGAACATGCACAAGCTTTGCCTATGAATCTGTGA 2538 0.433 MTETWLSSVFEEGRFCEIFHSNASGWRTCETCRKRIHCGCIVSSHAFMLLDPGGIECLACARKHMVLPSNSPWHQSFSLQNRLPERIRDMSGKNWSQLAGSGPVPWKQAPSLFNSVSSSDLHPDVPSLVELSNSIDKRYVIERLPASTMEKKNDDLSGISVNWSVKLGTRETMFMNDLAGIRNDDKPSSGLNMCQQPPSLKEDSSSQPFGMSIPYASANERNGQIGVTGSHSQQIQTPPGKHFSGLMQLALDSSSEALVRNGRPRADARGRNQLLPRYWPRCTDLELQQISIDSNSVITPLFQKTLSASDAGRIGRLVLPKKCAEAYFPPISQPEGLPLKILDAKGKEWIFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDTVTFSRLEPEGRLVMGFRKASNATPSDQDNETNKNGNGFSAPGEVELADPSSWSKVDKSGYIAKDALGSKSSMPRKRKLNILGSKSKRLKIESEDMIELKITWQEAQGLLRPPPSHVPSIVVIEGFEFEEYEDAPVLGKPTIFTDDNTGEKVQWAQCEDCLKWRKLPASALLQSKWTCSDNSWDQERSSCSAAQEMTTEEIENLLPPCNSGASNKMKATKQESDNAEALEGLDTLANLAILGEGESLPTSAQATTKHPRHRPGCSCIVCIQPPSGKGPKHKQSCTCNVCLTVKRRFRTLMLRREKKQFEKEAETTRKKQKQPHSQPLHSSEIFLEDDSLPCSNPVDSSSPNQNKEGNEVSDEDPNQVKSSTSPFKGQIDLNIQPEREEESSPGSDSGGMMKSLHNAVERCTKPTLNSGIGDTSGSQSRQVADGVREDQLSNGVALGSSSHGSKEHAQALPMNL 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00445 845 ProSiteProfiles Zinc finger CW-type profile. 530 580 IPR011124 GO:0008270
Arst10g00445 845 Gene3D - 534 588 - -
Arst10g00445 845 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 8 805 - -
Arst10g00445 845 Gene3D - 280 406 IPR015300 -
Arst10g00445 845 SUPERFAMILY DNA-binding pseudobarrel domain 299 401 IPR015300 -
Arst10g00445 845 SMART B3_2 302 403 IPR003340 GO:0003677
Arst10g00445 845 MobiDBLite consensus disorder prediction 791 816 - -
Arst10g00445 845 MobiDBLite consensus disorder prediction 403 421 - -
Arst10g00445 845 MobiDBLite consensus disorder prediction 689 845 - -
Arst10g00445 845 ProSiteProfiles B3 DNA-binding domain profile. 302 403 IPR003340 GO:0003677
Arst10g00445 845 MobiDBLite consensus disorder prediction 402 434 - -
Arst10g00445 845 MobiDBLite consensus disorder prediction 181 207 - -
Arst10g00445 845 CDD B3_DNA 300 401 IPR003340 GO:0003677
Arst10g00445 845 Pfam CW-type Zinc Finger 535 577 IPR011124 GO:0008270
Arst10g00445 845 MobiDBLite consensus disorder prediction 723 737 - -
Arst10g00445 845 MobiDBLite consensus disorder prediction 188 207 - -
Arst10g00445 845 MobiDBLite consensus disorder prediction 823 837 - -
Arst10g00445 845 MobiDBLite consensus disorder prediction 745 760 - -
Arst10g00445 845 Pfam B3 DNA binding domain 302 401 IPR003340 GO:0003677
Arst10g00445 845 FunFam B3 domain-containing transcription repressor VAL1 280 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00445 Arst-Chr10 3578117 3584348 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00445 9 70 B3 DNA Binding Superfamily AT4G32010 46.774 1.63e-15 79.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Arst10g00445 B3 9.1e-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00445 K09287 - gmx:100782114 1396.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g00445 10 3578117 3584348 Arst10g00445 10 3578117 3584348 ECH