Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00430 ATGAAGTTCAACCCAAGAGTATCGAGCAGTCGCCGCAAGAGCCGCAAGGCGCACTTCACGGCCCCGTCCAGCGTGCGGCGCGTGATCATGAGCGCACCCGTCTCCACCGACCTCCGCGCCAAGTACAACGTGCGCTCCATGCCGGTCCGCAAGGAAGACGAGGTTCAGGTTGTTCGTGGCACCTACAAGGGCCGTGAGGGCAAGGTCACACAGGTCTACCGCCGCAAATGGGTGATCCACATTGAGCGCATCACTCGAGAGAAGGTTAACGGCTCCACCGTCAACGTCGGAATCCACCCTTCCAAGGTTGTTATCACCAAGCTTCGCCTCGACAAGGACCGCAAGTCTCTCCTTGACCGTAAGTTTTTGGGAACGACATGGTTGCTGTTGTATTTGCAATGTGGGATTGCCATAATCGGTGCTGAAATTTTGTATTCTGACATGCACTGTTTACTTCCAAATTTGTTTGTTAATGATGGTTCCCTTTGTCAGACTATGGGTTAG 504 0.5357 MKFNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPVSTDLRAKYNVRSMPVRKEDEVQVVRGTYKGREGKVTQVYRRKWVIHIERITREKVNGSTVNVGIHPSKVVITKLRLDKDRKSLLDRKFLGTTWLLLYLQCGIAIIGAEILYSDMHCLLPNLFVNDGSLCQTMG 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00430 167 Pfam KOW motif 53 82 IPR005824 -
Arst10g00430 167 MobiDBLite consensus disorder prediction 1 20 - -
Arst10g00430 167 SUPERFAMILY Translation proteins SH3-like domain 8 120 IPR008991 -
Arst10g00430 167 PANTHER 60S RIBOSOMAL PROTEIN L26 FAMILY MEMBER 1 121 IPR005756 GO:0003735|GO:0006412|GO:0015934
Arst10g00430 167 ProSitePatterns Ribosomal protein L24 signature. 52 69 IPR005825 GO:0003735|GO:0005840|GO:0006412
Arst10g00430 167 SMART kow_9 48 75 IPR005824 -
Arst10g00430 167 Pfam Ribosomal proteins L26 eukaryotic, L24P archaeal 8 121 IPR005756 GO:0003735|GO:0006412|GO:0015934
Arst10g00430 167 FunFam 60S ribosomal protein L26 1 126 - -
Arst10g00430 167 CDD KOW_RPL26 53 105 IPR041988 GO:0003723
Arst10g00430 167 Hamap 50S ribosomal protein L24 [rplX]. 9 121 IPR005756 GO:0003735|GO:0006412|GO:0015934
Arst10g00430 167 Gene3D - 1 127 IPR014722 -
Arst10g00430 167 NCBIfam 50S ribosomal protein L24 8 121 IPR005756 GO:0003735|GO:0006412|GO:0015934
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00430 Arst-Chr10 3488324 3489302 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00430 1 124 Cytoplasmic Ribosomal Protein Gene Family AT3G49910 86.290 8.67e-76 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00430 K02898 - gmx:100819391 206.068