Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00419 ATGGGATGTACAAATTTGGTGTTGCATGTTCGACTCTTTGTTACTCTGATGGTGATTCTTGCTGGAACTTTCTGTGCAGTTGGTGACACTGACGTAGTTGATGTTGCAGCAATCAGTAGTCTATATGTTGCTCTTGGCTCACCGCCTCTTCTAGGGTGGAAGCCTGTGGGAGGAGATCCATGTTTTGAAATGTGGCAAGGTGTTGGCTGTGTATTTTCCAACATCACTTCCATAAGACTTGATGGCCTGAATTTGGGTGGAGAGCTTGGTAGTAATTTGAATTTTCCATCCATCTTAGAAATTGATCTTAGCAACAACCACATTGGAGGGCCCATTCCATTCACTTTGCCCCCTACTCTTACGAGCTTGTCTCTCTCAGGAAACCAGTTAAATGGAAGCATTCCAGATGCTTTATCATTACTAACTCAATTGTCACACTTGGATTTGTCAAATAACAACTTGAGTGGTCAGCTGCCTTCCTCAACAGGGACTTTATCATCCCTTACTACATTATACTTGCAGAACAATCAACTCTCTGGGACCCTTTATGTTTTGCAGGACCTGCCTCTTCAGGATCTGAATATTGAGAATAACTCATTCTCCGGGCCAATTCCGCCAAAACTGCTGAGTGTCCCTATTTTCAGAAAAGATGGAAATCCATTTAATACTAGTGTTATTCCATCACCTGCCGCAGCCCCATCACCTGCAGCTATGGCTCCATCCCCTGGGAAATCACCGTGGAGAGTAGCAAATAGTCCTTCTTCCCCAACTGCATCAGTGCTTGCAAGTGCTAGGAAGTCATTTATAGCTAAGAATATCATTTGGATTGCTGGTGCTGGTCTTTTGATATTTATTTTGTTAGGTGTTTGTATTTTTATGCTGTGGTGCTTTAAACGAAGGCCAGAGAAGAAAAATGCCAAGAAGCAAAATGTTGGTGTCTTCGAAAGTCCTTTACATAAACCTACTTGCAGTGACACTTCCTTTGAAACAACCAATCAGGAGGAGAAAGCAGTTGAGAAACCATCATTTGTATCTGAAGTGCCAAATAGAAAAACAAATTTGATTCCAAAGGTTCAGGATGAACAAGGAAAATATGTGAAAACAGCATCTGCAACTAGTGAGGCTTCCAAACTTTCACACCTCCAGCCACCACCGCGTCCTTACCCAACGACACAAAGTCAGAAGTTGATCCTCAATCCAGCTATACCTGTCAAAGGGTCTGAAATAAATGACAAAACATGTTCCCTTGAAGTTTATTCTATTGCATCACTTCAACAATATACCAATAGCTTTTCCCAAGAAAATTTTATTGGGGAAGGCACCTTAGGGCCTGTTTATAGGGCTGAGTTCCCTGATGGAAAGATATTGGCTGTGAGGAAATTAGATGCCACTGCTTCTATGGAGCAGAACCATGAACAATTTCTCCAATTAGTGTCCAACATCTCAAAAATTCAGCACCCTAATATTGTAAAGTTTACGGGCTACTGTACCGAGTATAGCCAACGGCTGCTTGTGTATGAGTACTGCAGTAATGGAACCCTGCATGACGCACTGCATGGCGATAGCGAATGCCGTATTAGACTAACATGGAATGCTCGAATTCAGGTGGCTCTTGGAGCTGCAAGAGCTTTAGAGTATATGCATGAGAACTTTCGGCCACCTATTGTGCACCGAAATTTTAAGTCTGCCAATGTACTCCTAAATGACAACCTGGAAGTGTGCATCTCTGATTGTGGATTAGGTCCTTTGCTATCTTCTGGCTCTGCTGGTCAGTTATCAGGACGACTCCTCACGGCTTATGGCTACAGTGCTCCAGAATTTGAGTTCGGAAGCTATACACATCAAAGTGATGTATTCAGTTTTGGAGTGGTAATGTTGGAACTTCTCACGGGACGAAAATCCCACGACAGGTCACTTCCGCGAGGGGAGCAAATATTGGTGAGATGGGCAGTCCCTCAACTCCATGACATTGACGCATTGTCGAAAATGGTTGACCCCAGCTTAAATGGAGCCTATCCTATGAAGTCCTTGTCGCGTTTTGCAGATATTGTTTCTTCATGCGTCCAGCATGAACCTGAATTCAGGCCAGCAATGTCTGAAGTTGTTCAAGATCTTCTAAGGATGATGTAA 2130 0.4319 MGCTNLVLHVRLFVTLMVILAGTFCAVGDTDVVDVAAISSLYVALGSPPLLGWKPVGGDPCFEMWQGVGCVFSNITSIRLDGLNLGGELGSNLNFPSILEIDLSNNHIGGPIPFTLPPTLTSLSLSGNQLNGSIPDALSLLTQLSHLDLSNNNLSGQLPSSTGTLSSLTTLYLQNNQLSGTLYVLQDLPLQDLNIENNSFSGPIPPKLLSVPIFRKDGNPFNTSVIPSPAAAPSPAAMAPSPGKSPWRVANSPSSPTASVLASARKSFIAKNIIWIAGAGLLIFILLGVCIFMLWCFKRRPEKKNAKKQNVGVFESPLHKPTCSDTSFETTNQEEKAVEKPSFVSEVPNRKTNLIPKVQDEQGKYVKTASATSEASKLSHLQPPPRPYPTTQSQKLILNPAIPVKGSEINDKTCSLEVYSIASLQQYTNSFSQENFIGEGTLGPVYRAEFPDGKILAVRKLDATASMEQNHEQFLQLVSNISKIQHPNIVKFTGYCTEYSQRLLVYEYCSNGTLHDALHGDSECRIRLTWNARIQVALGAARALEYMHENFRPPIVHRNFKSANVLLNDNLEVCISDCGLGPLLSSGSAGQLSGRLLTAYGYSAPEFEFGSYTHQSDVFSFGVVMLELLTGRKSHDRSLPRGEQILVRWAVPQLHDIDALSKMVDPSLNGAYPMKSLSRFADIVSSCVQHEPEFRPAMSEVVQDLLRMM 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00419 709 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 19 707 IPR046959 -
Arst10g00419 709 ProSiteProfiles Leucine-rich repeat profile. 119 141 IPR001611 GO:0005515
Arst10g00419 709 ProSiteProfiles Protein kinase domain profile. 431 709 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g00419 709 MobiDBLite consensus disorder prediction 232 251 - -
Arst10g00419 709 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 509 709 - -
Arst10g00419 709 Gene3D Transferase(Phosphotransferase) domain 1 509 709 - -
Arst10g00419 709 MobiDBLite consensus disorder prediction 369 392 - -
Arst10g00419 709 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 31 147 - -
Arst10g00419 709 SUPERFAMILY Protein kinase-like (PK-like) 414 705 IPR011009 -
Arst10g00419 709 SUPERFAMILY L domain-like 45 208 - -
Arst10g00419 709 Gene3D Ribonuclease Inhibitor 36 231 IPR032675 -
Arst10g00419 709 PRINTS Leucine-rich repeat signature 120 133 - -
Arst10g00419 709 PRINTS Leucine-rich repeat signature 141 154 - -
Arst10g00419 709 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 403 508 - -
Arst10g00419 709 Gene3D Phosphorylase Kinase; domain 1 403 508 - -
Arst10g00419 709 Pfam Protein tyrosine and serine/threonine kinase 434 705 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00419 Arst-Chr10 3432122 3437324 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00419 30 709 Strubbelig Receptor Gene Family AT4G03390 51.055 0.0 650
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Arst10g00419 PK_Tyr_Ser-Thr 7.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00419 - - ahf:112783685 1251.88