Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00411 ATGGATAACATTATAGTAGAGAGTACTACTACTTTAAGTTATATATATATAATAATGCTTTTTCTATCATTGAAACATGAAATAGTAGCAGCAGGAGATAACAACAGTGTCATTGATGACCTTGTGACTAACTTGCCTGGCCAGCCTCTTGTAGATTTCAAGCACTATGCTGGTTATGTCACTGTTAGTGATGACACCAATAATGGAGGAAGAGCACTCTTCTATTGGTTTTTTGAAGCCATCACCAACCCTCAAGATAAACCATTGGTGCTGTGGCTCAATGGAGGTCCTGGGTGCTCTTCTGTGGGATATGGAGCAACACAAGAGATTGGTCCATTTTTAGTGGACACAGATGGCAAGGGCCTTAAATTTAATAACTACTCTTGGAACAAAGAAGCCAACATGTTATTCCTGGAATCTCCTGTTGGAGTAGGCTTTTCCTACTCAAATTCAACTATGGTCTATGAAAATCTGGATGATGATATCACAGCTAATGATGCTTACAATTTTCTGCACAATTGGTTTCTCAAGTTTCCATCATATAGAACAAGCACATTTTATATTGCAGGAGAGAGCTATGCAGGGAAGTATGTACCTGAGCTAGCAGAACTGATATATGATAGGAAAGATGACCCTTCCCTTCATATTAATCTCAAGGGTATTTTGTTGGGGAATCCTGAAACATCTGATCCTGAAGACTTGTTAGGGCAAGTTGATTACGCTTGGAGCCATGCAGTGATATCTGATGAAACCTACAAAACAATAAGAAGAAGTTGTAACTTCAGTGATCCATATAAAAACAAAGATTGTGGTGATGGACTTGATGAACTTTATAAGCAATACGACCAAATTGATATTTATAGCCTCTACACCTCTGTTTGTTTTGCCACCACAGCGCTTTCAAATCATCAAATCAAGCACTCATCTAGGAACAAGATGCGTAGAATGATGGGAGGTTTTGATCCATGCTTGGATAATTATGCCAGAGCCTTTTACAATAGAGCAGATGTTCAGAAAGCTCTCCATGCCAGTGATGGTCTCATTCTCAAGAATTGGACTATTTGCAACAACGATATATTCAATAGTTGGAATTGGAACAAATCAAAGGCCTCTGTTATCCCAATATACAGGAAGCTTATTTCAGGAGGACTTAGGATTTGGGTTTATAGTGGAGACACAGATGGAAGAGTGCCAGTGCTTTCTACAAGATACAGCTTAAGTATTCTGGGTTTGGGAATCACTAAGCAATGGAGGCCATGGTACCATGAGAAACAGGTTAGTGGGTGGTATCAAGAATACGAGGGTCTCACTTTTGCAACATTTCGAGGAGCTGGCCATGCTGTCCCTTCTTTCAAACCAAGCAATTCACTTGCATTCTTCTCTTCCTTCCTTCTTGGACAATCTCCACCCTCTACTAGATCTACATGA 1428 0.3978 MDNIIVESTTTLSYIYIIMLFLSLKHEIVAAGDNNSVIDDLVTNLPGQPLVDFKHYAGYVTVSDDTNNGGRALFYWFFEAITNPQDKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGKGLKFNNYSWNKEANMLFLESPVGVGFSYSNSTMVYENLDDDITANDAYNFLHNWFLKFPSYRTSTFYIAGESYAGKYVPELAELIYDRKDDPSLHINLKGILLGNPETSDPEDLLGQVDYAWSHAVISDETYKTIRRSCNFSDPYKNKDCGDGLDELYKQYDQIDIYSLYTSVCFATTALSNHQIKHSSRNKMRRMMGGFDPCLDNYARAFYNRADVQKALHASDGLILKNWTICNNDIFNSWNWNKSKASVIPIYRKLISGGLRIWVYSGDTDGRVPVLSTRYSLSILGLGITKQWRPWYHEKQVSGWYQEYEGLTFATFRGAGHAVPSFKPSNSLAFFSSFLLGQSPPSTRST 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00411 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 138 148 IPR001563 GO:0004185|GO:0006508
Arst10g00411 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 137 IPR001563 GO:0004185|GO:0006508
Arst10g00411 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 174 199 IPR001563 GO:0004185|GO:0006508
Arst10g00411 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 436 449 IPR001563 GO:0004185|GO:0006508
Arst10g00411 475 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 40 453 IPR001563 GO:0004185|GO:0006508
Arst10g00411 475 ProSitePatterns Serine carboxypeptidases, serine active site. 188 195 IPR018202 GO:0004185
Arst10g00411 475 Pfam Serine carboxypeptidase 47 464 IPR001563 GO:0004185|GO:0006508
Arst10g00411 475 Gene3D - 372 466 - -
Arst10g00411 475 SUPERFAMILY alpha/beta-Hydrolases 40 468 IPR029058 -
Arst10g00411 475 Gene3D alpha/beta hydrolase 37 296 IPR029058 -
Arst10g00411 475 FunFam Carboxypeptidase 372 466 - -
Arst10g00411 475 Gene3D - 323 359 - -
Arst10g00411 475 FunFam Carboxypeptidase 36 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00411 Arst-Chr10 3348151 3352080 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00411 307 467 Calmodulin-binding Proteins AT2G22960 30.000 1.72e-15 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00411 K16297 - gmx:100819700 733.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g04402 3 119190396 119192907 Arst10g00411 10 3348151 3352080 PCT