Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00409 ATGGATTCATGTCAACCCCAACTCCCACCGGGATTCAGGTTCCACCCAACCGACGAAGAACTCATCGTTCACTACCTCAAGAGAAAAGCTTCCTCTGCTCCTCTCCCCGTTGCCATCATCGCCGACGTTGATCTCTACAAGTTCGACCCATGGGAGCTTCCAAGTAAGGCCACGTTTGGGGAGCAAGAATGGTATTTCTTTAGTCCGAGGGATCGCAAGTATCCGAATGGGGCTCGCCCAAACAGAGCAGCTACGTCCGGATATTGGAAGGCCACCGGCACTGATAAGCCTATTATTGCGTCTGATGGCCAACACCGACTCGGCGTCAAGAAAGCTCTCGTTTTCTATGGCGGCAAGCCTCCTAAAGGGGTCAAAACCAATTGGATCATGCACGAATATAGACTCACTACTACTCATAACAATAATTCTATCTCATCAAAGTCTTTTCCTTCTCTTCCTTCTCATCTTCCTTCCTCCAATCAGAAGAATAATTCCTTGAGGCTTGATGATTGGGTGTTGTGCCGAATATATGAAAAAAGCAACCGTGGCAATTTTGCAAGAACAGCGTTGATGGAGCACCATGATCATGATGATGATGATGACAATAATAAGGATCAGCTTTCCGCGGAAACAACGAGCATGATAGAAAACATGTCCACCATGAGTCAGAATTCCAAGCCCACACAACATTATGGACCATTGCTGGTTCAAAACGATGACAACTTCTTCAATGGAATCTTAGTCGCTGATCATCAAAATCATCAACATCACAACTTGCCAATGAAGAGGGCACTGGTGAATATGAATAATTCGCAGTTTTGGAATGAGACAAGCAAGAGGTTCCATTGTGATCTCAATAACAACACTAACACTACTGTTGCTAATAATGATGAGGATAACAGTTCCTTTGTTTCACTGCTTAGCCATAATCAGATTCCTCATCCTACTAACAATGCTTCTCTTCTTGGCCCTACTGTTGCTGATGGTGTTTTCAGGCAACACTTTCAACTTCAAACAATTAATTGGAACTTATAA 1035 0.4396 MDSCQPQLPPGFRFHPTDEELIVHYLKRKASSAPLPVAIIADVDLYKFDPWELPSKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPIIASDGQHRLGVKKALVFYGGKPPKGVKTNWIMHEYRLTTTHNNNSISSKSFPSLPSHLPSSNQKNNSLRLDDWVLCRIYEKSNRGNFARTALMEHHDHDDDDDNNKDQLSAETTSMIENMSTMSQNSKPTQHYGPLLVQNDDNFFNGILVADHQNHQHHNLPMKRALVNMNNSQFWNETSKRFHCDLNNNTNTTVANNDEDNSSFVSLLSHNQIPHPTNNASLLGPTVADGVFRQHFQLQTINWNL 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00409 344 Gene3D NAC domain 17 184 IPR036093 GO:0003677|GO:0006355
Arst10g00409 344 PANTHER NAC TRANSCRIPTION FACTOR 56 8 221 - -
Arst10g00409 344 MobiDBLite consensus disorder prediction 140 161 - -
Arst10g00409 344 Pfam No apical meristem (NAM) protein 9 135 IPR003441 GO:0003677|GO:0006355
Arst10g00409 344 ProSiteProfiles NAC domain profile. 8 179 IPR003441 GO:0003677|GO:0006355
Arst10g00409 344 FunFam NAC transcription factor 56 17 184 - -
Arst10g00409 344 SUPERFAMILY NAC domain 5 179 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00409 Arst-Chr10 3338214 3339880 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00409 6 343 NAC Transcription Factor Family AT1G61110 50.145 7.04e-99 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Arst10g00409 NAM 2.2e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00409 - - aip:107624204 629.787