Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00392 ATGGGTTTGAGTTCTAAGCAGGTTTCAAGTACAGGACTTGATTGGAACAAGGCCTTGTTGCAATCATCACAAAACTTGGAGCTACCATCAAAGATTACTACTATGAAGAAACAACAACAACAACAACAACAACAAATTCAGCAGCAGCAACCAATATTAGAGCCTCTGAGGTGTCCAAGATGTGATTCAACAAACACAAAGTTTTGTTACTACAACAATTACAACAAGTCTCAGCCTCGCCATTTCTGTAGAGCTTGCAAGAGGCACTGGACTAAAGGTGGAACTCTCCGCAATGTTCCTGTTGGAGGTGGAAGAAAGAATAAGAGACCAACCAAGAAATCAACAACCACTACTTCTATTAGCACCACCACCACTACCACTGTTACCACCTTAAATGGTGGTGGTGGAAAAATGGAAGTTCAACCTCAGAGTAATCGTCCTCTTCCTCCTCCTCCTCCTCCTACTCTTTACCAATCTATGATTCGTCCACCACCTTTGCTACCACAACAGAATAATAATAATAATCTATCAGAAGTTAAGGACTTTGGTGGTAGTGAAATGTTTCTGAGTTCATCATCATCAGCTTTGAATCTTCCTCAGAGTCAAAGTCTAATCTTTCCCTTCTCAACAGCATCAAGTTCTAGTTTTGATGCAAACCCATGTTCAGTTTCAGCCTCCAATATTTATAGCTATGGTGGAGAAGAGTTTAAGACAATGGAGGAGACAACCATCAATGGTACTAACACACACCTATGGGAGATTCCATTACCTGCTACAACAACAAGTGTTGCTATGGAAATGCCTTCAAATTATTGGGGTTGGGAGGACCTTGATCCTTTGGTCTCAACTGATCTAAATGTTCCTTGGGATGATTCTGATATCAAACCTTGA 891 0.4085 MGLSSKQVSSTGLDWNKALLQSSQNLELPSKITTMKKQQQQQQQQIQQQQPILEPLRCPRCDSTNTKFCYYNNYNKSQPRHFCRACKRHWTKGGTLRNVPVGGGRKNKRPTKKSTTTTSISTTTTTTVTTLNGGGGKMEVQPQSNRPLPPPPPPTLYQSMIRPPPLLPQQNNNNNLSEVKDFGGSEMFLSSSSSALNLPQSQSLIFPFSTASSSSFDANPCSVSASNIYSYGGEEFKTMEETTINGTNTHLWEIPLPATTTSVAMEMPSNYWGWEDLDPLVSTDLNVPWDDSDIKP 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00392 296 ProSiteProfiles Zinc finger Dof-type profile. 56 110 IPR003851 GO:0003677|GO:0006355
Arst10g00392 296 ProSitePatterns Zinc finger Dof-type signature. 58 94 IPR003851 GO:0003677|GO:0006355
Arst10g00392 296 MobiDBLite consensus disorder prediction 113 139 - -
Arst10g00392 296 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 37 210 IPR045174 GO:0003700|GO:0006355
Arst10g00392 296 Pfam Dof domain, zinc finger 56 108 IPR003851 GO:0003677|GO:0006355
Arst10g00392 296 MobiDBLite consensus disorder prediction 97 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00392 Arst-Chr10 3181284 3183137 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00392 46 123 C2C2-Dof Transcription Factor Family AT5G60200 65.823 1.78e-30 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Arst10g00392 zf-Dof 4.9e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00392 - - gmx:100818111 281.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g04427 3 119580119 119581591 Arst10g00392 10 3181284 3183137 PCT